| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is resA [H]
Identifier: 121998482
GI number: 121998482
Start: 1858514
End: 1859335
Strand: Reverse
Name: resA [H]
Synonym: Hhal_1703
Alternate gene names: 121998482
Gene position: 1859335-1858514 (Counterclockwise)
Preceding gene: 121998483
Following gene: 121998481
Centisome position: 69.42
GC content: 67.15
Gene sequence:
>822_bases ATGAGTGCCTTGAATCAGACCGTCGCCTTGGGGCCTTTGGTGCTCTCCATTGGCCAGATCCTGCTCATCCTGGCGCTGGT GGTCGCCCTGATCGCCGGTGGCCTGGCTGCCCGGCGCAGCGGTGTGAGCGTTAGTGACAGCCTGTTCAGCCTGGTGCTGG TGGGTCTGGTGGGGGCGCGGGTGCTGTTCGTGTTCCACTACTGGGAGAGCTTCGAAAGCCTGTGGGGGGTGGTGGATATC CGCGATGGCGGGTTCGACCCTGTCGGCGGCGTCGTGGCCGGCCTGGCCTACCTGGCCTGGCGGTTCTGGCGGTCGCCGCA GCAGCGCCGCGCCCTGGTCACGGCGGTGGTGGCCGGCGGCATCGTCTGGGGGGTGACGGCGGGCCCGCTGCTGGTCATCG ACCAGCAGTCCCGTTCCGTGCCGGACGTGGCGGTGAGCACCCTCGAAGGCGAGCATACGGATCTGCCCGCCTTGATTGAG GAGACCGGGAAGCCGGTGGTGGTCAACCTGTGGGCGACCTGGTGTCCGGCGTGCCAGCAGGAGAAGCCGGTCTTCGAGCA GGCGCAGGAGCGCGAGGACGGGGTCAAGTTCGTCTTCGTCAACCAGGGTGAGGACGCCGGGCAGGTCCAGGGGTATCTGG AGGAGCATGCGCCGTCGCTGGACAATATCCTGATGGATCCCCATCAGCGCTGGAGCGACGCCACCGGTACCCGCGGCCTT CCGGCCACCTTTTTCTATGATGAGCAGGGCCAATTGGTGGATTCCCACACCGGCCAGGTTTCCAGCGCCTCGCTGGAGAG CGGTCTGGAACGGCTGCGCTGA
Upstream 100 bases:
>100_bases CGCGCGCGCTGCGAGCCCTGGGCGAGGAGGACCCGCACGTTTTCGCCCTGGAGGAGGCCATGGAGGATCTCTTCCCCCGT TCAACCGGAGTTGTCAGCCC
Downstream 100 bases:
>100_bases ACGGAGGGCAACGAGGCGGTGAGCCTGTCCAAGCGGATCGATCGGCTGCGCGCCCAGGCTGGCGGCCGGGCGGTGGCTGC GGTGTCTGAGTCGGCAACGC
Product: redoxin domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 273; Mature: 272
Protein sequence:
>273_residues MSALNQTVALGPLVLSIGQILLILALVVALIAGGLAARRSGVSVSDSLFSLVLVGLVGARVLFVFHYWESFESLWGVVDI RDGGFDPVGGVVAGLAYLAWRFWRSPQQRRALVTAVVAGGIVWGVTAGPLLVIDQQSRSVPDVAVSTLEGEHTDLPALIE ETGKPVVVNLWATWCPACQQEKPVFEQAQEREDGVKFVFVNQGEDAGQVQGYLEEHAPSLDNILMDPHQRWSDATGTRGL PATFFYDEQGQLVDSHTGQVSSASLESGLERLR
Sequences:
>Translated_273_residues MSALNQTVALGPLVLSIGQILLILALVVALIAGGLAARRSGVSVSDSLFSLVLVGLVGARVLFVFHYWESFESLWGVVDI RDGGFDPVGGVVAGLAYLAWRFWRSPQQRRALVTAVVAGGIVWGVTAGPLLVIDQQSRSVPDVAVSTLEGEHTDLPALIE ETGKPVVVNLWATWCPACQQEKPVFEQAQEREDGVKFVFVNQGEDAGQVQGYLEEHAPSLDNILMDPHQRWSDATGTRGL PATFFYDEQGQLVDSHTGQVSSASLESGLERLR >Mature_272_residues SALNQTVALGPLVLSIGQILLILALVVALIAGGLAARRSGVSVSDSLFSLVLVGLVGARVLFVFHYWESFESLWGVVDIR DGGFDPVGGVVAGLAYLAWRFWRSPQQRRALVTAVVAGGIVWGVTAGPLLVIDQQSRSVPDVAVSTLEGEHTDLPALIEE TGKPVVVNLWATWCPACQQEKPVFEQAQEREDGVKFVFVNQGEDAGQVQGYLEEHAPSLDNILMDPHQRWSDATGTRGLP ATFFYDEQGQLVDSHTGQVSSASLESGLERLR
Specific function: Thiol-disulfide oxidoreductase which is required in disulfide reduction during c-type cytochrome synthesis. May accept reducing equivalents from CcdA, leading to breakage of disulfide bonds in apocytochrome c; following this reduction heme can be covalent
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cell membrane; Single-pass type II membrane protein. Note=The thioredoxin-like motif is exposed on the outside of the membrane (By similarity) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: NA
Molecular weight: Translated: 29433; Mature: 29302
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: PS00194 THIOREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALNQTVALGPLVLSIGQILLILALVVALIAGGLAARRSGVSVSDSLFSLVLVGLVGAR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHH VLFVFHYWESFESLWGVVDIRDGGFDPVGGVVAGLAYLAWRFWRSPQQRRALVTAVVAGG HHHHHHHHHHHHHHHCEEEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC IVWGVTAGPLLVIDQQSRSVPDVAVSTLEGEHTDLPALIEETGKPVVVNLWATWCPACQQ HHEECCCCCEEEEECCCCCCCHHHHHHCCCCCCCCHHHHHHCCCCEEEEEHHHHCCCCCC EKPVFEQAQEREDGVKFVFVNQGEDAGQVQGYLEEHAPSLDNILMDPHQRWSDATGTRGL CCCHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCHHHHHCCCHHHHCCCCCCCCC PATFFYDEQGQLVDSHTGQVSSASLESGLERLR CEEEEECCCCCEECCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure SALNQTVALGPLVLSIGQILLILALVVALIAGGLAARRSGVSVSDSLFSLVLVGLVGAR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHH VLFVFHYWESFESLWGVVDIRDGGFDPVGGVVAGLAYLAWRFWRSPQQRRALVTAVVAGG HHHHHHHHHHHHHHHCEEEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC IVWGVTAGPLLVIDQQSRSVPDVAVSTLEGEHTDLPALIEETGKPVVVNLWATWCPACQQ HHEECCCCCEEEEECCCCCCCHHHHHHCCCCCCCCHHHHHHCCCCEEEEEHHHHCCCCCC EKPVFEQAQEREDGVKFVFVNQGEDAGQVQGYLEEHAPSLDNILMDPHQRWSDATGTRGL CCCHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCHHHHHCCCHHHHCCCCCCCCC PATFFYDEQGQLVDSHTGQVSSASLESGLERLR CEEEEECCCCCEECCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]