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The map label for this gene is chaC [H]

Identifier: 121998483

GI number: 121998483

Start: 1859332

End: 1859922

Strand: Reverse

Name: chaC [H]

Synonym: Hhal_1704

Alternate gene names: 121998483

Gene position: 1859922-1859332 (Counterclockwise)

Preceding gene: 121998484

Following gene: 121998482

Centisome position: 69.44

GC content: 65.82

Gene sequence:

>591_bases
ATGGTTGCGGACACCACGGCGATCAACCGACAGCACCGGCCGTTTCCGGGCCAGGACAGCTTCTGGCTGTTCGGTTACGG
CTCCCTGATCTACAAAGCCGATTTCCCCTATCTGGCGTGTCGCCCGGCGGTGATTCACGGCTGGAAGCGCCGTTTCTGGC
AGGGCTCCCACGATCACCGGGGTACGCCGCAGGCGCCGGGGCGCGTGGCCACGCTGATCGAGGATCCCAGCGTGCGCTGT
GTCGGCATGGCCTATCGGATTCGGCCTGAAGCGCTGGGACCCCTGGATCTGCGCGAGAAGAACGGTTATCTCCGTTTCAC
CACGCCGCTGCGGTTTCTGGATGGCGGTGAGGATCGGGGGCTGGTCTACATTGCCACGGAGGAGAACCCCGCGTTCCTCG
GTCCTGCACCGATCCCGGATATGGCCCGGCAGATTGTCAGCTGCAGCGGCCCCAGCGGCTCCAACCGGGACTACCTCCTG
GAGCTGGCGCGCGCGCTGCGAGCCCTGGGCGAGGAGGACCCGCACGTTTTCGCCCTGGAGGAGGCCATGGAGGATCTCTT
CCCCCGTTCAACCGGAGTTGTCAGCCCATGA

Upstream 100 bases:

>100_bases
CCAGAGCCGGCGGCGCAGGTCACGCCGCGCCTTTGCGGTTAGGGCTAGATCAGCCCGTTTGGGGAGAGCATGGGCTGGAG
GGTCTGGTATCCTCGGACTC

Downstream 100 bases:

>100_bases
GTGCCTTGAATCAGACCGTCGCCTTGGGGCCTTTGGTGCTCTCCATTGGCCAGATCCTGCTCATCCTGGCGCTGGTGGTC
GCCCTGATCGCCGGTGGCCT

Product: ChaC family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MVADTTAINRQHRPFPGQDSFWLFGYGSLIYKADFPYLACRPAVIHGWKRRFWQGSHDHRGTPQAPGRVATLIEDPSVRC
VGMAYRIRPEALGPLDLREKNGYLRFTTPLRFLDGGEDRGLVYIATEENPAFLGPAPIPDMARQIVSCSGPSGSNRDYLL
ELARALRALGEEDPHVFALEEAMEDLFPRSTGVVSP

Sequences:

>Translated_196_residues
MVADTTAINRQHRPFPGQDSFWLFGYGSLIYKADFPYLACRPAVIHGWKRRFWQGSHDHRGTPQAPGRVATLIEDPSVRC
VGMAYRIRPEALGPLDLREKNGYLRFTTPLRFLDGGEDRGLVYIATEENPAFLGPAPIPDMARQIVSCSGPSGSNRDYLL
ELARALRALGEEDPHVFALEEAMEDLFPRSTGVVSP
>Mature_196_residues
MVADTTAINRQHRPFPGQDSFWLFGYGSLIYKADFPYLACRPAVIHGWKRRFWQGSHDHRGTPQAPGRVATLIEDPSVRC
VGMAYRIRPEALGPLDLREKNGYLRFTTPLRFLDGGEDRGLVYIATEENPAFLGPAPIPDMARQIVSCSGPSGSNRDYLL
ELARALRALGEEDPHVFALEEAMEDLFPRSTGVVSP

Specific function: Unknown

COG id: COG3703

COG function: function code P; Uncharacterized protein involved in cation transport

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chaC family [H]

Homologues:

Organism=Homo sapiens, GI56790287, Length=174, Percent_Identity=48.2758620689655, Blast_Score=152, Evalue=2e-37,
Organism=Homo sapiens, GI218563698, Length=188, Percent_Identity=39.3617021276596, Blast_Score=123, Evalue=1e-28,
Organism=Homo sapiens, GI218563700, Length=172, Percent_Identity=34.3023255813954, Blast_Score=103, Evalue=1e-22,
Organism=Escherichia coli, GI145693119, Length=189, Percent_Identity=30.1587301587302, Blast_Score=69, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17560078, Length=176, Percent_Identity=38.6363636363636, Blast_Score=117, Evalue=4e-27,
Organism=Saccharomyces cerevisiae, GI6321011, Length=200, Percent_Identity=35.5, Blast_Score=110, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24641578, Length=188, Percent_Identity=44.1489361702128, Blast_Score=131, Evalue=2e-31,
Organism=Drosophila melanogaster, GI45553467, Length=159, Percent_Identity=44.6540880503145, Blast_Score=117, Evalue=5e-27,
Organism=Drosophila melanogaster, GI24649389, Length=159, Percent_Identity=44.6540880503145, Blast_Score=117, Evalue=5e-27,
Organism=Drosophila melanogaster, GI24649391, Length=159, Percent_Identity=44.6540880503145, Blast_Score=117, Evalue=5e-27,
Organism=Drosophila melanogaster, GI24649393, Length=159, Percent_Identity=44.6540880503145, Blast_Score=117, Evalue=5e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013024
- InterPro:   IPR006840 [H]

Pfam domain/function: PF04752 ChaC [H]

EC number: NA

Molecular weight: Translated: 21871; Mature: 21871

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVADTTAINRQHRPFPGQDSFWLFGYGSLIYKADFPYLACRPAVIHGWKRRFWQGSHDHR
CCCCCCCCCCCCCCCCCCCCEEEEEECEEEEECCCCEEEECHHHHHHHHHHHCCCCCCCC
GTPQAPGRVATLIEDPSVRCVGMAYRIRPEALGPLDLREKNGYLRFTTPLRFLDGGEDRG
CCCCCCCEEEEEEECCCCEEEEEEEEECCCCCCCCCEECCCCEEEEECCEEEECCCCCCC
LVYIATEENPAFLGPAPIPDMARQIVSCSGPSGSNRDYLLELARALRALGEEDPHVFALE
EEEEEECCCCCEECCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEHH
EAMEDLFPRSTGVVSP
HHHHHHCCCCCCCCCC
>Mature Secondary Structure
MVADTTAINRQHRPFPGQDSFWLFGYGSLIYKADFPYLACRPAVIHGWKRRFWQGSHDHR
CCCCCCCCCCCCCCCCCCCCEEEEEECEEEEECCCCEEEECHHHHHHHHHHHCCCCCCCC
GTPQAPGRVATLIEDPSVRCVGMAYRIRPEALGPLDLREKNGYLRFTTPLRFLDGGEDRG
CCCCCCCEEEEEEECCCCEEEEEEEEECCCCCCCCCEECCCCEEEEECCEEEECCCCCCC
LVYIATEENPAFLGPAPIPDMARQIVSCSGPSGSNRDYLLELARALRALGEEDPHVFALE
EEEEEECCCCCEECCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEHH
EAMEDLFPRSTGVVSP
HHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]