| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is yeaG [H]
Identifier: 121998472
GI number: 121998472
Start: 1848127
End: 1850073
Strand: Reverse
Name: yeaG [H]
Synonym: Hhal_1693
Alternate gene names: 121998472
Gene position: 1850073-1848127 (Counterclockwise)
Preceding gene: 121998473
Following gene: 121998471
Centisome position: 69.07
GC content: 62.97
Gene sequence:
>1947_bases ATGGATACCGCCGAAGACCTGATTGCCCGCTACGCCCGCAGCTACGAACGCCGCCAGGAGCAGCAGCTGACCCTGGCCGA GTACCTGGAACTCTGCCGGGACGACCCGACGGCCTACGCGTCTCCGGCGGAGCGGCTGGTCGCGGCAATCGGTGAGCCGC AGGTCTACGACACCTCGAAGGACGAGCGGCTGGGGCGCATCTTTCTCAACCGCACCCTGAAGATCTACCCCGCCTTCGAG GACTTCTACGGCATGGAGGAAACCATCGAGCGGCTGGTCGGTTTCCTCAACTACGCGGCCCAGGGGCTGGAGGAGCGCAA GCAGATCCTTTATCTCCTCGGGCCGGTCGGGGGTGGCAAGTCCTCGCTGGCCGAGCGGCTCAAGCAGTTGATGGAGCGCT ACCCCATCTACGTGCTCAAGGCGGGCGAGGAGGTCAGTCCGATCTTCGAAAGCCCGCTGGGGCTGTTCGATCCGGACCAG CATGGGCCGGAACTGGAGGAACGCTTCGGCATCCCGCGGCGCAAGCTGAGCGGACTGCTCTCGCCCTGGGCGGTGAAGCG ACTGGACGAGTTCGGCGGTGATCTGAACCGCTTCCGGGTGGTGCGGATCTACCCCTCGAAGCTGCGGCAGATCGGCGTGG CGAAGACCGAACCCGGTGACGAGAACAATCAGGACATCTCGTCGCTGGTCGGTAAGGTGGACATCCGCAAGCTGGAGCTC TACAGCCAGAACGACACCGACGCGTACAGCTACTCTGGGGGGCTCAATCGCGCCAACCAGGGCATCCTCGAGTTCGTCGA GATGTTCAAGGCGCCGATCAAGATGCTCCACCCTCTGCTCACCGCCACCCAGGAGGGCAACTACGTCGGCTCCGAGAACA TTGGTGCCATCCCGTTCCACGGGCTGGTCATGGCGCACTCGAACGAGTCGGAGTGGCAGAGCTTCCGGAACAACAAGAAT AACGAGGCGTTCCTCGACCGCATCTCGGTGATCAAGGTGCCGTACTGCCTGCGCGTCAGCGAGGAGCGGCAGATCTACGA CAAGCTCATCCGTGAGAGCGAGCTCGCCGACGCCCCGTGCGCACCCTGGACCCTGGAGATCATGGCCCGTTTCTCCGTGC TCACCCGGCTCAAGGAGCATGAGAACTCCAGCCTCTATTCCAAGATGCGCATCTACGACGGCGAGAGCCTGAAGGAGACC GACCCGAAGGCCAAGTCCATGCAGGAGTACCGCGACCAGGCCGGGGTCAACGAGGGTATGGACGGGATCTCCACGCGCTT CGCCTTCAAGGTTCTGTCGCAGACTTTCAACTACGAGACCGCGGAGGTGGCGGCCGATCCGGTCCACCTGCTCTATCTGC TCGAGCAGAACATCAAGCGCGAGCAGTTTCCCGAGGAGACCGAACGCAAGTATCTGGAGATCATCAAGGCGGAGCTGGCA CCGCGCTACGCCGAGTTCATCGGCAACGAGATCCAGAAGGCGTACCTGGAGTCCTACGACGACTTCGGTCAGAACCTCTT CGAGCGCTACGTGGGCTACGCCGACGCGTGGATCGAGGACCAGGACTTCAAGGATCCCGACACCGGGCAGCTGATGGACC GGCAGGCGCTGAACCAGGAGCTGACGAAGATCGAAAAGCCGGCGGGTATCGCCAACCCCAAGGACTTCCGCAACGAGGTG GTCAAGTTCGCCCTGCGCGCTAAGGCCCAGCAGGGTGGTCACATGCCCAGCTGGACCTCCTACGAGAAGATCCGCGAAGT CATCGAGAAGCGGATGTTCAGCCAGGTGGAGGATCTGCTCCCGGTGATCAGCTTTACCACGAAGGGCGACTCCGAGACCG AGCGCAAGCACAGTGAGTTTGTCCGCCGCATGGTCGAGCGGGGGTATACCGAGCGCCAGGTGCGACGTCTGGTGGAGTGG TACATGCGCGTCAAGCAGGCCGGCTGA
Upstream 100 bases:
>100_bases TCTTCCGGAACATTGATGCGCATTTTTGCGTCCAATCAATAGGAGCTGCCTTCGCTCTTTCGCGACTTCACCTCAAGACT CCGTGAGGGGGGTGCTGCAT
Downstream 100 bases:
>100_bases TCCGGTAATAGGGGGGGTGCGTCCTTGGTCAATATCATCGACCGGCGCCGCAATCCGAAGGGCAAGAGCCTGGCCAACCG CCAGCGTTTTCTCCGGCGTG
Product: putative serine protein kinase, PrkA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 648; Mature: 648
Protein sequence:
>648_residues MDTAEDLIARYARSYERRQEQQLTLAEYLELCRDDPTAYASPAERLVAAIGEPQVYDTSKDERLGRIFLNRTLKIYPAFE DFYGMEETIERLVGFLNYAAQGLEERKQILYLLGPVGGGKSSLAERLKQLMERYPIYVLKAGEEVSPIFESPLGLFDPDQ HGPELEERFGIPRRKLSGLLSPWAVKRLDEFGGDLNRFRVVRIYPSKLRQIGVAKTEPGDENNQDISSLVGKVDIRKLEL YSQNDTDAYSYSGGLNRANQGILEFVEMFKAPIKMLHPLLTATQEGNYVGSENIGAIPFHGLVMAHSNESEWQSFRNNKN NEAFLDRISVIKVPYCLRVSEERQIYDKLIRESELADAPCAPWTLEIMARFSVLTRLKEHENSSLYSKMRIYDGESLKET DPKAKSMQEYRDQAGVNEGMDGISTRFAFKVLSQTFNYETAEVAADPVHLLYLLEQNIKREQFPEETERKYLEIIKAELA PRYAEFIGNEIQKAYLESYDDFGQNLFERYVGYADAWIEDQDFKDPDTGQLMDRQALNQELTKIEKPAGIANPKDFRNEV VKFALRAKAQQGGHMPSWTSYEKIREVIEKRMFSQVEDLLPVISFTTKGDSETERKHSEFVRRMVERGYTERQVRRLVEW YMRVKQAG
Sequences:
>Translated_648_residues MDTAEDLIARYARSYERRQEQQLTLAEYLELCRDDPTAYASPAERLVAAIGEPQVYDTSKDERLGRIFLNRTLKIYPAFE DFYGMEETIERLVGFLNYAAQGLEERKQILYLLGPVGGGKSSLAERLKQLMERYPIYVLKAGEEVSPIFESPLGLFDPDQ HGPELEERFGIPRRKLSGLLSPWAVKRLDEFGGDLNRFRVVRIYPSKLRQIGVAKTEPGDENNQDISSLVGKVDIRKLEL YSQNDTDAYSYSGGLNRANQGILEFVEMFKAPIKMLHPLLTATQEGNYVGSENIGAIPFHGLVMAHSNESEWQSFRNNKN NEAFLDRISVIKVPYCLRVSEERQIYDKLIRESELADAPCAPWTLEIMARFSVLTRLKEHENSSLYSKMRIYDGESLKET DPKAKSMQEYRDQAGVNEGMDGISTRFAFKVLSQTFNYETAEVAADPVHLLYLLEQNIKREQFPEETERKYLEIIKAELA PRYAEFIGNEIQKAYLESYDDFGQNLFERYVGYADAWIEDQDFKDPDTGQLMDRQALNQELTKIEKPAGIANPKDFRNEV VKFALRAKAQQGGHMPSWTSYEKIREVIEKRMFSQVEDLLPVISFTTKGDSETERKHSEFVRRMVERGYTERQVRRLVEW YMRVKQAG >Mature_648_residues MDTAEDLIARYARSYERRQEQQLTLAEYLELCRDDPTAYASPAERLVAAIGEPQVYDTSKDERLGRIFLNRTLKIYPAFE DFYGMEETIERLVGFLNYAAQGLEERKQILYLLGPVGGGKSSLAERLKQLMERYPIYVLKAGEEVSPIFESPLGLFDPDQ HGPELEERFGIPRRKLSGLLSPWAVKRLDEFGGDLNRFRVVRIYPSKLRQIGVAKTEPGDENNQDISSLVGKVDIRKLEL YSQNDTDAYSYSGGLNRANQGILEFVEMFKAPIKMLHPLLTATQEGNYVGSENIGAIPFHGLVMAHSNESEWQSFRNNKN NEAFLDRISVIKVPYCLRVSEERQIYDKLIRESELADAPCAPWTLEIMARFSVLTRLKEHENSSLYSKMRIYDGESLKET DPKAKSMQEYRDQAGVNEGMDGISTRFAFKVLSQTFNYETAEVAADPVHLLYLLEQNIKREQFPEETERKYLEIIKAELA PRYAEFIGNEIQKAYLESYDDFGQNLFERYVGYADAWIEDQDFKDPDTGQLMDRQALNQELTKIEKPAGIANPKDFRNEV VKFALRAKAQQGGHMPSWTSYEKIREVIEKRMFSQVEDLLPVISFTTKGDSETERKHSEFVRRMVERGYTERQVRRLVEW YMRVKQAG
Specific function: Unknown
COG id: COG2766
COG function: function code T; Putative Ser protein kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prkA family [H]
Homologues:
Organism=Escherichia coli, GI1788083, Length=643, Percent_Identity=65.7853810264386, Blast_Score=919, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013153 - InterPro: IPR010650 - InterPro: IPR016230 [H]
Pfam domain/function: PF08298 AAA_PrkA; PF06798 PrkA [H]
EC number: NA
Molecular weight: Translated: 74803; Mature: 74803
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: PS00107 PROTEIN_KINASE_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTAEDLIARYARSYERRQEQQLTLAEYLELCRDDPTAYASPAERLVAAIGEPQVYDTSK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCC DERLGRIFLNRTLKIYPAFEDFYGMEETIERLVGFLNYAAQGLEERKQILYLLGPVGGGK HHHHHHHHHHCCCEEEECHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEEHHCCCCCCCH SSLAERLKQLMERYPIYVLKAGEEVSPIFESPLGLFDPDQHGPELEERFGIPRRKLSGLL HHHHHHHHHHHHHCCEEEEECCCCCCHHHHCCCCCCCCCCCCCCHHHHHCCCHHHHHHCC SPWAVKRLDEFGGDLNRFRVVRIYPSKLRQIGVAKTEPGDENNQDISSLVGKVDIRKLEL CHHHHHHHHHHCCCHHHEEEEEECHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHEEE YSQNDTDAYSYSGGLNRANQGILEFVEMFKAPIKMLHPLLTATQEGNYVGSENIGAIPFH ECCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC GLVMAHSNESEWQSFRNNKNNEAFLDRISVIKVPYCLRVSEERQIYDKLIRESELADAPC CEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHCCHHEECCHHHHHHHHHHHHHHCCCCCC APWTLEIMARFSVLTRLKEHENSSLYSKMRIYDGESLKETDPKAKSMQEYRDQAGVNEGM CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCC DGISTRFAFKVLSQTFNYETAEVAADPVHLLYLLEQNIKREQFPEETERKYLEIIKAELA HHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH PRYAEFIGNEIQKAYLESYDDFGQNLFERYVGYADAWIEDQDFKDPDTGQLMDRQALNQE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCHHHHHHHHHHHH LTKIEKPAGIANPKDFRNEVVKFALRAKAQQGGHMPSWTSYEKIREVIEKRMFSQVEDLL HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH PVISFTTKGDSETERKHSEFVRRMVERGYTERQVRRLVEWYMRVKQAG HHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDTAEDLIARYARSYERRQEQQLTLAEYLELCRDDPTAYASPAERLVAAIGEPQVYDTSK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCC DERLGRIFLNRTLKIYPAFEDFYGMEETIERLVGFLNYAAQGLEERKQILYLLGPVGGGK HHHHHHHHHHCCCEEEECHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEEHHCCCCCCCH SSLAERLKQLMERYPIYVLKAGEEVSPIFESPLGLFDPDQHGPELEERFGIPRRKLSGLL HHHHHHHHHHHHHCCEEEEECCCCCCHHHHCCCCCCCCCCCCCCHHHHHCCCHHHHHHCC SPWAVKRLDEFGGDLNRFRVVRIYPSKLRQIGVAKTEPGDENNQDISSLVGKVDIRKLEL CHHHHHHHHHHCCCHHHEEEEEECHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHEEE YSQNDTDAYSYSGGLNRANQGILEFVEMFKAPIKMLHPLLTATQEGNYVGSENIGAIPFH ECCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC GLVMAHSNESEWQSFRNNKNNEAFLDRISVIKVPYCLRVSEERQIYDKLIRESELADAPC CEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHCCHHEECCHHHHHHHHHHHHHHCCCCCC APWTLEIMARFSVLTRLKEHENSSLYSKMRIYDGESLKETDPKAKSMQEYRDQAGVNEGM CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCC DGISTRFAFKVLSQTFNYETAEVAADPVHLLYLLEQNIKREQFPEETERKYLEIIKAELA HHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH PRYAEFIGNEIQKAYLESYDDFGQNLFERYVGYADAWIEDQDFKDPDTGQLMDRQALNQE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCHHHHHHHHHHHH LTKIEKPAGIANPKDFRNEVVKFALRAKAQQGGHMPSWTSYEKIREVIEKRMFSQVEDLL HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH PVISFTTKGDSETERKHSEFVRRMVERGYTERQVRRLVEWYMRVKQAG HHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]