| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is metK [H]
Identifier: 121998455
GI number: 121998455
Start: 1828733
End: 1829899
Strand: Reverse
Name: metK [H]
Synonym: Hhal_1676
Alternate gene names: 121998455
Gene position: 1829899-1828733 (Counterclockwise)
Preceding gene: 121998456
Following gene: 121998454
Centisome position: 68.32
GC content: 65.38
Gene sequence:
>1167_bases ATGAGCAAGCGCTACCTCTTTACGTCTGAGTCGGTGTCCGAGGGCCACCCGGACAAGATGGCCGACGCGATCTCCGATGC CCTGCTGGACGAGTTCCTGCGCCAGGATCCGAAGTCCCGCGTGGCGGCTGAGACCATGATCCAGACCGGCATGGTCGTGG TAGCTGGCGAGATCAAGAGCACGGCCAAGGTCAACGTTGAGCCGCTGGTTCGCGACGTGGTCCGTGAGATCGGCTACACC AGCTCGGACATGGGCTTCGACGCCGACACCTGCGCGGTGCTCAACGCGCTGGGCGAGCAGTCCCCGGACATCAACCAGGG CGTCGATCGCGAGGAGGAAGAGGAGCAGGGCGCTGGTGACCAGGGCCTGATGTTCGGCTACGCCACCAATGAGACCGATG TGCTCATGCCGGCGGCCATCCACTACTCCCACCTGCTGGTCAAGCGCCAGGCCGAGGTGCGCAAGAACGGCAAGCTGCCG TGGCTGCGCCCCGACGCGAAGAGCCAGGTCACCTTCCAGTACGAAGGCGACAAGATCGTTGGCTGTGACGCCGTGGTGCT CTCCACCCAGCACGACGAGACCGTGGATCAGAAGACGGTCCACGAGGGCGTGATGGAGGAGATCATCAAGCCCGTACTGG GTGACACCGGCTGGCTGACCAACGACACCAAGTATCACATCAACCCGACCGGGCGCTTCGTCACCGGCGGCCCGCTGGGT GATTGCGGCCTGACCGGCCGGAAGATCATCGTCGACACCTACGGCGGCATGGGCCGTCACGGCGGTGGTGCCTTCTCCGG CAAGGATCCGTCCAAGGTCGACCGCTCGGCTGCGTACGTCGGTCGCTACGTCGCCAAGAACGTGGTCGCCGCCGGCCTGG CTGACCGCTGCGAGGTGCAGCTCTCCTACGCCATCGGCGTTGCCGAGCCGACCTCCGTCAACGTCGAGACCTTCGGCACC GGCAAGATCGACGAGGAAGTGATCAACAAGGTGGTCCGCGAGAACTTCGACCTGCGTCCGTACGGCATCCTGAAGATGCT GGGCCTGGAGCAGCCGATCTACCGCCCGACCGCCGCCTACGGCCACTTTGGCCGCGAGGACATCGACGTGCCGTGGGAGC GCACCGACCGTGCTGCCGCCCTCAAGGACGCCGCTGGCCTCAAGTAA
Upstream 100 bases:
>100_bases TAACCCCCGCGTATTCACCCATGGATTCCGGGCCGCGCGCGGCTGCGGCCGCGCCGCCGGAGTTGTATAACCTGAGAATC CTTAGCGAGAAGGAGTAACC
Downstream 100 bases:
>100_bases CCGAATACGCAAGGAGTAACCCGAAAGCATGAGTAATCAAGACTACAAGGTTGCGGATATCTCCCTGGCCGACTGGGGCC GTAAGGAGATCAAGATCGCC
Product: methionine adenosyltransferase
Products: NA
Alternate protein names: AdoMet synthase; MAT; Methionine adenosyltransferase [H]
Number of amino acids: Translated: 388; Mature: 387
Protein sequence:
>388_residues MSKRYLFTSESVSEGHPDKMADAISDALLDEFLRQDPKSRVAAETMIQTGMVVVAGEIKSTAKVNVEPLVRDVVREIGYT SSDMGFDADTCAVLNALGEQSPDINQGVDREEEEEQGAGDQGLMFGYATNETDVLMPAAIHYSHLLVKRQAEVRKNGKLP WLRPDAKSQVTFQYEGDKIVGCDAVVLSTQHDETVDQKTVHEGVMEEIIKPVLGDTGWLTNDTKYHINPTGRFVTGGPLG DCGLTGRKIIVDTYGGMGRHGGGAFSGKDPSKVDRSAAYVGRYVAKNVVAAGLADRCEVQLSYAIGVAEPTSVNVETFGT GKIDEEVINKVVRENFDLRPYGILKMLGLEQPIYRPTAAYGHFGREDIDVPWERTDRAAALKDAAGLK
Sequences:
>Translated_388_residues MSKRYLFTSESVSEGHPDKMADAISDALLDEFLRQDPKSRVAAETMIQTGMVVVAGEIKSTAKVNVEPLVRDVVREIGYT SSDMGFDADTCAVLNALGEQSPDINQGVDREEEEEQGAGDQGLMFGYATNETDVLMPAAIHYSHLLVKRQAEVRKNGKLP WLRPDAKSQVTFQYEGDKIVGCDAVVLSTQHDETVDQKTVHEGVMEEIIKPVLGDTGWLTNDTKYHINPTGRFVTGGPLG DCGLTGRKIIVDTYGGMGRHGGGAFSGKDPSKVDRSAAYVGRYVAKNVVAAGLADRCEVQLSYAIGVAEPTSVNVETFGT GKIDEEVINKVVRENFDLRPYGILKMLGLEQPIYRPTAAYGHFGREDIDVPWERTDRAAALKDAAGLK >Mature_387_residues SKRYLFTSESVSEGHPDKMADAISDALLDEFLRQDPKSRVAAETMIQTGMVVVAGEIKSTAKVNVEPLVRDVVREIGYTS SDMGFDADTCAVLNALGEQSPDINQGVDREEEEEQGAGDQGLMFGYATNETDVLMPAAIHYSHLLVKRQAEVRKNGKLPW LRPDAKSQVTFQYEGDKIVGCDAVVLSTQHDETVDQKTVHEGVMEEIIKPVLGDTGWLTNDTKYHINPTGRFVTGGPLGD CGLTGRKIIVDTYGGMGRHGGGAFSGKDPSKVDRSAAYVGRYVAKNVVAAGLADRCEVQLSYAIGVAEPTSVNVETFGTG KIDEEVINKVVRENFDLRPYGILKMLGLEQPIYRPTAAYGHFGREDIDVPWERTDRAAALKDAAGLK
Specific function: Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the e
COG id: COG0192
COG function: function code H; S-adenosylmethionine synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AdoMet synthase family [H]
Homologues:
Organism=Homo sapiens, GI5174529, Length=374, Percent_Identity=55.6149732620321, Blast_Score=389, Evalue=1e-108, Organism=Homo sapiens, GI4557737, Length=374, Percent_Identity=55.0802139037433, Blast_Score=385, Evalue=1e-107, Organism=Escherichia coli, GI1789311, Length=385, Percent_Identity=74.025974025974, Blast_Score=596, Evalue=1e-172, Organism=Caenorhabditis elegans, GI25145633, Length=389, Percent_Identity=54.7557840616967, Blast_Score=389, Evalue=1e-108, Organism=Caenorhabditis elegans, GI17538498, Length=376, Percent_Identity=54.5212765957447, Blast_Score=385, Evalue=1e-107, Organism=Caenorhabditis elegans, GI17551082, Length=379, Percent_Identity=54.353562005277, Blast_Score=385, Evalue=1e-107, Organism=Caenorhabditis elegans, GI17538494, Length=376, Percent_Identity=54.2553191489362, Blast_Score=383, Evalue=1e-107, Organism=Caenorhabditis elegans, GI32565905, Length=376, Percent_Identity=48.6702127659575, Blast_Score=322, Evalue=3e-88, Organism=Caenorhabditis elegans, GI25145635, Length=338, Percent_Identity=52.6627218934911, Blast_Score=320, Evalue=9e-88, Organism=Caenorhabditis elegans, GI32565911, Length=329, Percent_Identity=52.5835866261398, Blast_Score=318, Evalue=3e-87, Organism=Caenorhabditis elegans, GI32565903, Length=302, Percent_Identity=51.9867549668874, Blast_Score=283, Evalue=1e-76, Organism=Caenorhabditis elegans, GI32565909, Length=83, Percent_Identity=57.8313253012048, Blast_Score=104, Evalue=7e-23, Organism=Saccharomyces cerevisiae, GI6320710, Length=379, Percent_Identity=53.0343007915567, Blast_Score=374, Evalue=1e-104, Organism=Saccharomyces cerevisiae, GI6323209, Length=380, Percent_Identity=53.1578947368421, Blast_Score=372, Evalue=1e-104, Organism=Drosophila melanogaster, GI45552159, Length=374, Percent_Identity=53.2085561497326, Blast_Score=354, Evalue=6e-98, Organism=Drosophila melanogaster, GI24580529, Length=374, Percent_Identity=53.2085561497326, Blast_Score=354, Evalue=6e-98, Organism=Drosophila melanogaster, GI24580537, Length=374, Percent_Identity=53.2085561497326, Blast_Score=354, Evalue=6e-98, Organism=Drosophila melanogaster, GI24580533, Length=374, Percent_Identity=53.2085561497326, Blast_Score=354, Evalue=6e-98, Organism=Drosophila melanogaster, GI24580535, Length=374, Percent_Identity=53.2085561497326, Blast_Score=354, Evalue=6e-98, Organism=Drosophila melanogaster, GI24580531, Length=374, Percent_Identity=53.2085561497326, Blast_Score=354, Evalue=6e-98, Organism=Drosophila melanogaster, GI24580527, Length=374, Percent_Identity=52.4064171122995, Blast_Score=348, Evalue=3e-96, Organism=Drosophila melanogaster, GI24580525, Length=374, Percent_Identity=52.4064171122995, Blast_Score=348, Evalue=3e-96, Organism=Drosophila melanogaster, GI24580541, Length=375, Percent_Identity=50.1333333333333, Blast_Score=326, Evalue=2e-89, Organism=Drosophila melanogaster, GI24580539, Length=118, Percent_Identity=55.0847457627119, Blast_Score=129, Evalue=3e-30,
Paralogues:
None
Copy number: 7,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022631 - InterPro: IPR022630 - InterPro: IPR022629 - InterPro: IPR022628 - InterPro: IPR002133 - InterPro: IPR022636 [H]
Pfam domain/function: PF02773 S-AdoMet_synt_C; PF02772 S-AdoMet_synt_M; PF00438 S-AdoMet_synt_N [H]
EC number: =2.5.1.6 [H]
Molecular weight: Translated: 42246; Mature: 42115
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: PS00376 ADOMET_SYNTHETASE_1 ; PS00377 ADOMET_SYNTHETASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKRYLFTSESVSEGHPDKMADAISDALLDEFLRQDPKSRVAAETMIQTGMVVVAGEIKS CCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCEEEEEECCCC TAKVNVEPLVRDVVREIGYTSSDMGFDADTCAVLNALGEQSPDINQGVDREEEEEQGAGD CCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCC QGLMFGYATNETDVLMPAAIHYSHLLVKRQAEVRKNGKLPWLRPDAKSQVTFQYEGDKIV CCEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCEEE GCDAVVLSTQHDETVDQKTVHEGVMEEIIKPVLGDTGWLTNDTKYHINPTGRFVTGGPLG CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEECCCCC DCGLTGRKIIVDTYGGMGRHGGGAFSGKDPSKVDRSAAYVGRYVAKNVVAAGLADRCEVQ CCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCEEE LSYAIGVAEPTSVNVETFGTGKIDEEVINKVVRENFDLRPYGILKMLGLEQPIYRPTAAY EEEEEECCCCCCCCEEECCCCCCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCHHH GHFGREDIDVPWERTDRAAALKDAAGLK CCCCCCCCCCCCCCCCHHHHHHHHCCCC >Mature Secondary Structure SKRYLFTSESVSEGHPDKMADAISDALLDEFLRQDPKSRVAAETMIQTGMVVVAGEIKS CCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCEEEEEECCCC TAKVNVEPLVRDVVREIGYTSSDMGFDADTCAVLNALGEQSPDINQGVDREEEEEQGAGD CCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCC QGLMFGYATNETDVLMPAAIHYSHLLVKRQAEVRKNGKLPWLRPDAKSQVTFQYEGDKIV CCEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCEEE GCDAVVLSTQHDETVDQKTVHEGVMEEIIKPVLGDTGWLTNDTKYHINPTGRFVTGGPLG CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEECCCCC DCGLTGRKIIVDTYGGMGRHGGGAFSGKDPSKVDRSAAYVGRYVAKNVVAAGLADRCEVQ CCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCEEE LSYAIGVAEPTSVNVETFGTGKIDEEVINKVVRENFDLRPYGILKMLGLEQPIYRPTAAY EEEEEECCCCCCCCEEECCCCCCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCHHH GHFGREDIDVPWERTDRAAALKDAAGLK CCCCCCCCCCCCCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 14528314 [H]