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The map label for this gene is bioC [C]

Identifier: 121998456

GI number: 121998456

Start: 1829997

End: 1830833

Strand: Reverse

Name: bioC [C]

Synonym: Hhal_1677

Alternate gene names: 121998456

Gene position: 1830833-1829997 (Counterclockwise)

Preceding gene: 121998457

Following gene: 121998455

Centisome position: 68.35

GC content: 62.01

Gene sequence:

>837_bases
ATGAGTCAGTATGATGACGAGGCCATTGAGGTGGCCCGCCAGTATTACAACAGTCGCGATGCAGACAACTTCTACTTCCA
CATCTGGGGGGGTGAGGATCTGCACGTCGGCATCTACGAAGACGAGGATGAGCCGATCTTCGACGCCAGTCGTCGGACGG
TCGAGCGGATGGCCGCGAAGCTGAATAACCTGAGCGCCGACAGCTACGTGCTGGACGTGGGCGCCGGTTACGGCGGCGTG
GCCCGCTACCTGGCGCACACCTACGGGTGCCGCGTGGTCGCGCTGAATCTCTCCGAGCGCGAGAATGAGCGCGACCGGCA
GATGAACAAGGAGCAGGGCGTCGATCACCTGATCGAGGTGGTGGACGGGGCCTTTGAGGACATCCCCTTCGACGCCGAGA
CGTTCGATATCGTCTGGTGCCAGGACTCGTTCCTGCACAGCGGTGATCGGCCCCGGGTGATGAGCGAGGTGACTCGCGTG
CTGAAGAAGGGCGGTGAGTTCATCTTTACGGACCCGATGCAGGCCGACGACTGCCCCGAGGGTGTCCTCCAGCCGATCCT
CGATCGCATCCACCTCTCGACTATGGGTACGCCGGGCTTCTACCGTGAGGAGCTCAAGAAGAACGGCATGACGGAGCTCG
AGTTCGATGACAATACGCCGCAGCTCCCGCGCCACTATGGCCGTGTTCATAAGGAGCTGGAGCGGCGCGGTCACGAGCTT
GACGGGATCGTCTCCGACGACTACGTCGCCCGCATGAAAAAGGGCCTGCAGCACTGGGTCGAGGGCGGCAACAACGGCTA
CCTGTCCTGGGGCATCTTCCACTTCCGGAAGGACTAA

Upstream 100 bases:

>100_bases
ATCGAGACCTACGGCGATTTCAAGGAGACGTATCGGGATGCCGATCCCGACTTCTTCATCCATGTCGCCGAGAAGGCCTA
TCGGGAGGAGGAATAACCTG

Downstream 100 bases:

>100_bases
CCCCCGCGTATTCACCCATGGATTCCGGGCCGCGCGCGGCTGCGGCCGCGCCGCCGGAGTTGTATAACCTGAGAATCCTT
AGCGAGAAGGAGTAACCATG

Product: type 11 methyltransferase

Products: NA

Alternate protein names: SAM-Dependent Methyltransferase; Methyltransferase; Sarcosine-Dimethylglycine Methyltransferase; UbiE/COQ5 Family Methlytransferase; Cyclopropane-Fatty-Acyl-Phospholipid Synthase; Glycine-Sarcosine Methyltransferase; Cyclopropane-Fatty-Acyl-Phospholipid Synthase Superfamily; Ubiquinone/Menaquinone Biosynthesis Methylase-Like Protein; Sterol-C-Methyltransferase; Delta(24)-Sterol C-Methyltransferase; Glycine/Sarcosine N-Methyltransferase; Gamma-copherol Methyltransferase; NDP-Hexose 3-O-Methyltransferase; Sarcosine/Dimethylglycine N-Methyltransferase; Glycine Sarcosine N-Methyltransferase; Methylase Involved In Ubiquinone/Menaquinone Biosynthesis; Sam-Dependent Methyltransferase Protein; Staurosporine Biosynthesis Methyltransferase StaMA

Number of amino acids: Translated: 278; Mature: 277

Protein sequence:

>278_residues
MSQYDDEAIEVARQYYNSRDADNFYFHIWGGEDLHVGIYEDEDEPIFDASRRTVERMAAKLNNLSADSYVLDVGAGYGGV
ARYLAHTYGCRVVALNLSERENERDRQMNKEQGVDHLIEVVDGAFEDIPFDAETFDIVWCQDSFLHSGDRPRVMSEVTRV
LKKGGEFIFTDPMQADDCPEGVLQPILDRIHLSTMGTPGFYREELKKNGMTELEFDDNTPQLPRHYGRVHKELERRGHEL
DGIVSDDYVARMKKGLQHWVEGGNNGYLSWGIFHFRKD

Sequences:

>Translated_278_residues
MSQYDDEAIEVARQYYNSRDADNFYFHIWGGEDLHVGIYEDEDEPIFDASRRTVERMAAKLNNLSADSYVLDVGAGYGGV
ARYLAHTYGCRVVALNLSERENERDRQMNKEQGVDHLIEVVDGAFEDIPFDAETFDIVWCQDSFLHSGDRPRVMSEVTRV
LKKGGEFIFTDPMQADDCPEGVLQPILDRIHLSTMGTPGFYREELKKNGMTELEFDDNTPQLPRHYGRVHKELERRGHEL
DGIVSDDYVARMKKGLQHWVEGGNNGYLSWGIFHFRKD
>Mature_277_residues
SQYDDEAIEVARQYYNSRDADNFYFHIWGGEDLHVGIYEDEDEPIFDASRRTVERMAAKLNNLSADSYVLDVGAGYGGVA
RYLAHTYGCRVVALNLSERENERDRQMNKEQGVDHLIEVVDGAFEDIPFDAETFDIVWCQDSFLHSGDRPRVMSEVTRVL
KKGGEFIFTDPMQADDCPEGVLQPILDRIHLSTMGTPGFYREELKKNGMTELEFDDNTPQLPRHYGRVHKELERRGHELD
GIVSDDYVARMKKGLQHWVEGGNNGYLSWGIFHFRKD

Specific function: Bioc Is Involved In An Early, But Chemically Unexplored, Step In The Conversion Of Pimelic Acid To Biotin. [C]

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI25143945, Length=171, Percent_Identity=27.4853801169591, Blast_Score=69, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6323635, Length=227, Percent_Identity=29.0748898678414, Blast_Score=69, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32011; Mature: 31880

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQYDDEAIEVARQYYNSRDADNFYFHIWGGEDLHVGIYEDEDEPIFDASRRTVERMAAK
CCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEEEECCCCCCHHHHHHHHHHHHHH
LNNLSADSYVLDVGAGYGGVARYLAHTYGCRVVALNLSERENERDRQMNKEQGVDHLIEV
HHCCCCCCEEEECCCCCHHHHHHHHHHCCCEEEEEECHHHCCHHHHHCCHHHHHHHHHHH
VDGAFEDIPFDAETFDIVWCQDSFLHSGDRPRVMSEVTRVLKKGGEFIFTDPMQADDCPE
HHHHHHCCCCCCCEEEEEEECHHHHCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCH
GVLQPILDRIHLSTMGTPGFYREELKKNGMTELEFDDNTPQLPRHYGRVHKELERRGHEL
HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCC
DGIVSDDYVARMKKGLQHWVEGGNNGYLSWGIFHFRKD
CCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECC
>Mature Secondary Structure 
SQYDDEAIEVARQYYNSRDADNFYFHIWGGEDLHVGIYEDEDEPIFDASRRTVERMAAK
CCCCHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEEEECCCCCCHHHHHHHHHHHHHH
LNNLSADSYVLDVGAGYGGVARYLAHTYGCRVVALNLSERENERDRQMNKEQGVDHLIEV
HHCCCCCCEEEECCCCCHHHHHHHHHHCCCEEEEEECHHHCCHHHHHCCHHHHHHHHHHH
VDGAFEDIPFDAETFDIVWCQDSFLHSGDRPRVMSEVTRVLKKGGEFIFTDPMQADDCPE
HHHHHHCCCCCCCEEEEEEECHHHHCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCH
GVLQPILDRIHLSTMGTPGFYREELKKNGMTELEFDDNTPQLPRHYGRVHKELERRGHEL
HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCC
DGIVSDDYVARMKKGLQHWVEGGNNGYLSWGIFHFRKD
CCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA