| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
Click here to switch to the map view.
The map label for this gene is ahcY
Identifier: 121998454
GI number: 121998454
Start: 1827412
End: 1828704
Strand: Reverse
Name: ahcY
Synonym: Hhal_1675
Alternate gene names: 121998454
Gene position: 1828704-1827412 (Counterclockwise)
Preceding gene: 121998455
Following gene: 121998453
Centisome position: 68.27
GC content: 63.73
Gene sequence:
>1293_bases ATGAGTAATCAAGACTACAAGGTTGCGGATATCTCCCTGGCCGACTGGGGCCGTAAGGAGATCAAGATCGCCGAGAGCGA GATGCCGGGTCTGATGGAGACCCGGCGCGAGTTCGCCGCGCAGAAGCCCCTCAAGGGCGCGCGTATCGCCGGCTGCCTGC ACATGACCATCCAGACTGCGGTCCTCATCGAGACCCTGCAGGAGCTGGGCGCAGAGGTCCGCTGGTCCTCCTGCAACATC TTCTCCACGCAGGACCAGGCAGCCGCCGCCGTCGCGGCTAACGGCACCCCGGTCTTCGCCTGGAAGGGCGAGACCGAGGA GGAGTACTGGTGGTGCATCGAGCAGACCATCAACGGTCCGGACGGCTGGAAGCCGAACATGCTGCTCGACGACGGTGGTG ACCTGACCGCCGTGATCCACGAGCAGTACCCGGACATGATGAAGGACATCTACGGTGTCTCCGAGGAGACCACCACCGGC GTGCACCGTCTCTACGAGATGAGCCGTAAGGGCGAGCTCGGCATGCCGGCGTTCAACGTCAACGACTCGGTCACCAAGTC GAAGTTCGACAACCTCTACGGCTGCCGTGAGTCGCTGGTCGACAGCATCAAGCGCGCCACCGACGTCATGATCGCCGGCA AGGTGGCCGTCGTGGCCGGCTTCGGCGACGTCGGCAAGGGCTCGGCCCAGTCCCTGCGTGGCCTGGGTGCCCAGGTGTGG GTCACCGAGGTCGACCCGATCTGTGCCCTGCAGGCCTCCATGGACGGCTACAAGGTCGTCACCATGGAAGAGGCTGCCCC GGTGGCCGACATCTTCGTCACCGCCACGGGCAACTACAACGTGATCACCCACGATCACATGAAGGCGATGAAGGACGAGG CCATCGTCTGCAACATCGGCCACTTCGACAACGAGATCGACGTGGCGAGCCTTAAGCAGTACAAGTGGGACGAGATCAAG CCGCAGGTCGACCATGTCGAGTTCCCCGACGGCAAGAAGATCACCCTGCTCGCCGAGGGCCGCCTGGTGAACCTGGGCTG CGCCACCGGCCACCCGTCCTTCGTGATGTCCAACTCGTTCACCAACCAGGTGATGGCTCAGATGGAGCTGTACAACAACC CTGGCAAGTACGAGAAGGACGTCTACGTGCTGCCCAAGCACCTGGACGAGAAGGTTGCGGCGCTGCACCTCGGCCGCGTC GGCGCCAACCTGACCCGTCTCAGCGAGGAGCAGGCCGGGTACATCGGCGTCTCCGTCGACGGGCCGTTCAAGCCGGAGTG GTACCGCTACTAA
Upstream 100 bases:
>100_bases GAGGACATCGACGTGCCGTGGGAGCGCACCGACCGTGCTGCCGCCCTCAAGGACGCCGCTGGCCTCAAGTAACCGAATAC GCAAGGAGTAACCCGAAAGC
Downstream 100 bases:
>100_bases GCCGGTACGCCACCACGGCTTGACCGACAGACCCGGGGGCCGCGCAGCGGCCTCCGGGGTTTCGGTTGAGCGCCCAGAGC GTTCAGCGTTCAGCGTTCGG
Product: S-adenosyl-L-homocysteine hydrolase
Products: NA
Alternate protein names: S-adenosyl-L-homocysteine hydrolase; AdoHcyase
Number of amino acids: Translated: 430; Mature: 429
Protein sequence:
>430_residues MSNQDYKVADISLADWGRKEIKIAESEMPGLMETRREFAAQKPLKGARIAGCLHMTIQTAVLIETLQELGAEVRWSSCNI FSTQDQAAAAVAANGTPVFAWKGETEEEYWWCIEQTINGPDGWKPNMLLDDGGDLTAVIHEQYPDMMKDIYGVSEETTTG VHRLYEMSRKGELGMPAFNVNDSVTKSKFDNLYGCRESLVDSIKRATDVMIAGKVAVVAGFGDVGKGSAQSLRGLGAQVW VTEVDPICALQASMDGYKVVTMEEAAPVADIFVTATGNYNVITHDHMKAMKDEAIVCNIGHFDNEIDVASLKQYKWDEIK PQVDHVEFPDGKKITLLAEGRLVNLGCATGHPSFVMSNSFTNQVMAQMELYNNPGKYEKDVYVLPKHLDEKVAALHLGRV GANLTRLSEEQAGYIGVSVDGPFKPEWYRY
Sequences:
>Translated_430_residues MSNQDYKVADISLADWGRKEIKIAESEMPGLMETRREFAAQKPLKGARIAGCLHMTIQTAVLIETLQELGAEVRWSSCNI FSTQDQAAAAVAANGTPVFAWKGETEEEYWWCIEQTINGPDGWKPNMLLDDGGDLTAVIHEQYPDMMKDIYGVSEETTTG VHRLYEMSRKGELGMPAFNVNDSVTKSKFDNLYGCRESLVDSIKRATDVMIAGKVAVVAGFGDVGKGSAQSLRGLGAQVW VTEVDPICALQASMDGYKVVTMEEAAPVADIFVTATGNYNVITHDHMKAMKDEAIVCNIGHFDNEIDVASLKQYKWDEIK PQVDHVEFPDGKKITLLAEGRLVNLGCATGHPSFVMSNSFTNQVMAQMELYNNPGKYEKDVYVLPKHLDEKVAALHLGRV GANLTRLSEEQAGYIGVSVDGPFKPEWYRY >Mature_429_residues SNQDYKVADISLADWGRKEIKIAESEMPGLMETRREFAAQKPLKGARIAGCLHMTIQTAVLIETLQELGAEVRWSSCNIF STQDQAAAAVAANGTPVFAWKGETEEEYWWCIEQTINGPDGWKPNMLLDDGGDLTAVIHEQYPDMMKDIYGVSEETTTGV HRLYEMSRKGELGMPAFNVNDSVTKSKFDNLYGCRESLVDSIKRATDVMIAGKVAVVAGFGDVGKGSAQSLRGLGAQVWV TEVDPICALQASMDGYKVVTMEEAAPVADIFVTATGNYNVITHDHMKAMKDEAIVCNIGHFDNEIDVASLKQYKWDEIKP QVDHVEFPDGKKITLLAEGRLVNLGCATGHPSFVMSNSFTNQVMAQMELYNNPGKYEKDVYVLPKHLDEKVAALHLGRVG ANLTRLSEEQAGYIGVSVDGPFKPEWYRY
Specific function: May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
COG id: COG0499
COG function: function code H; S-adenosylhomocysteine hydrolase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosylhomocysteinase family
Homologues:
Organism=Homo sapiens, GI9951915, Length=427, Percent_Identity=67.9156908665105, Blast_Score=585, Evalue=1e-167, Organism=Homo sapiens, GI239937451, Length=405, Percent_Identity=67.6543209876543, Blast_Score=553, Evalue=1e-158, Organism=Homo sapiens, GI298286489, Length=431, Percent_Identity=56.1484918793503, Blast_Score=531, Evalue=1e-151, Organism=Homo sapiens, GI24308043, Length=431, Percent_Identity=56.1484918793503, Blast_Score=531, Evalue=1e-151, Organism=Homo sapiens, GI195539337, Length=431, Percent_Identity=56.1484918793503, Blast_Score=530, Evalue=1e-151, Organism=Homo sapiens, GI195539349, Length=431, Percent_Identity=56.1484918793503, Blast_Score=529, Evalue=1e-150, Organism=Homo sapiens, GI21361647, Length=431, Percent_Identity=54.9883990719258, Blast_Score=508, Evalue=1e-144, Organism=Caenorhabditis elegans, GI17506425, Length=434, Percent_Identity=66.5898617511521, Blast_Score=589, Evalue=1e-168, Organism=Saccharomyces cerevisiae, GI6320882, Length=444, Percent_Identity=63.5135135135135, Blast_Score=563, Evalue=1e-161, Organism=Drosophila melanogaster, GI24642172, Length=432, Percent_Identity=68.5185185185185, Blast_Score=598, Evalue=1e-171, Organism=Drosophila melanogaster, GI24656245, Length=418, Percent_Identity=57.177033492823, Blast_Score=518, Evalue=1e-147, Organism=Drosophila melanogaster, GI45553387, Length=428, Percent_Identity=56.0747663551402, Blast_Score=506, Evalue=1e-143, Organism=Drosophila melanogaster, GI45553385, Length=427, Percent_Identity=55.9718969555035, Blast_Score=503, Evalue=1e-143,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): SAHH_HALHL (A1WXM7)
Other databases:
- EMBL: CP000544 - RefSeq: YP_001003241.1 - ProteinModelPortal: A1WXM7 - SMR: A1WXM7 - STRING: A1WXM7 - GeneID: 4709919 - GenomeReviews: CP000544_GR - KEGG: hha:Hhal_1675 - eggNOG: COG0499 - HOGENOM: HBG352029 - OMA: VITHDHM - PhylomeDB: A1WXM7 - ProtClustDB: PRK05476 - BioCyc: HHAL349124:HHAL_1675-MONOMER - GO: GO:0005737 - GO: GO:0005488 - HAMAP: MF_00563 - InterPro: IPR000043 - InterPro: IPR015878 - InterPro: IPR020082 - PANTHER: PTHR23420 - PIRSF: PIRSF001109 - TIGRFAMs: TIGR00936
Pfam domain/function: PF05221 AdoHcyase; PF00670 AdoHcyase_NAD
EC number: =3.3.1.1
Molecular weight: Translated: 47510; Mature: 47379
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: PS00738 ADOHCYASE_1; PS00739 ADOHCYASE_2
Important sites: BINDING 56-56 BINDING 131-131 BINDING 156-156 BINDING 186-186 BINDING 190-190 BINDING 191-191 BINDING 243-243 BINDING 278-278 BINDING 344-344
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNQDYKVADISLADWGRKEIKIAESEMPGLMETRREFAAQKPLKGARIAGCLHMTIQTA CCCCCEEEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH VLIETLQELGAEVRWSSCNIFSTQDQAAAAVAANGTPVFAWKGETEEEYWWCIEQTINGP HHHHHHHHHCCCEEECCCCEECCCCCHHEEEECCCCEEEEECCCCCCHHEEEEEHHCCCC DGWKPNMLLDDGGDLTAVIHEQYPDMMKDIYGVSEETTTGVHRLYEMSRKGELGMPAFNV CCCCCCEEEECCCCEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEECC NDSVTKSKFDNLYGCRESLVDSIKRATDVMIAGKVAVVAGFGDVGKGSAQSLRGLGAQVW CCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCEEEEEECCCCCCCCHHHHHCCCCEEE VTEVDPICALQASMDGYKVVTMEEAAPVADIFVTATGNYNVITHDHMKAMKDEAIVCNIG EEECCCEEEEEECCCCEEEEEECCCCCEEEEEEEECCCEEEEEHHHHHHHCCCEEEEECC HFDNEIDVASLKQYKWDEIKPQVDHVEFPDGKKITLLAEGRLVNLGCATGHPSFVMSNSF CCCCCCCHHHHHHCCCCCCCCCCCCEECCCCCEEEEEECCEEEEEEECCCCCCEEEECCH TNQVMAQMELYNNPGKYEKDVYVLPKHLDEKVAALHLGRVGANLTRLSEEQAGYIGVSVD HHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEEC GPFKPEWYRY CCCCCCCCCC >Mature Secondary Structure SNQDYKVADISLADWGRKEIKIAESEMPGLMETRREFAAQKPLKGARIAGCLHMTIQTA CCCCEEEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH VLIETLQELGAEVRWSSCNIFSTQDQAAAAVAANGTPVFAWKGETEEEYWWCIEQTINGP HHHHHHHHHCCCEEECCCCEECCCCCHHEEEECCCCEEEEECCCCCCHHEEEEEHHCCCC DGWKPNMLLDDGGDLTAVIHEQYPDMMKDIYGVSEETTTGVHRLYEMSRKGELGMPAFNV CCCCCCEEEECCCCEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEECC NDSVTKSKFDNLYGCRESLVDSIKRATDVMIAGKVAVVAGFGDVGKGSAQSLRGLGAQVW CCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCEEEEEECCCCCCCCHHHHHCCCCEEE VTEVDPICALQASMDGYKVVTMEEAAPVADIFVTATGNYNVITHDHMKAMKDEAIVCNIG EEECCCEEEEEECCCCEEEEEECCCCCEEEEEEEECCCEEEEEHHHHHHHCCCEEEEECC HFDNEIDVASLKQYKWDEIKPQVDHVEFPDGKKITLLAEGRLVNLGCATGHPSFVMSNSF CCCCCCCHHHHHHCCCCCCCCCCCCEECCCCCEEEEEECCEEEEEEECCCCCCEEEECCH TNQVMAQMELYNNPGKYEKDVYVLPKHLDEKVAALHLGRVGANLTRLSEEQAGYIGVSVD HHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEEC GPFKPEWYRY CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA