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The map label for this gene is 121998386

Identifier: 121998386

GI number: 121998386

Start: 1747715

End: 1747939

Strand: Reverse

Name: 121998386

Synonym: Hhal_1607

Alternate gene names: NA

Gene position: 1747939-1747715 (Counterclockwise)

Preceding gene: 121998387

Following gene: 121998385

Centisome position: 65.26

GC content: 62.22

Gene sequence:

>225_bases
ATGGCTGACGAGATGCGGAACGTTAGCGACGAGGAAGCCAAAGAGTTTCACGCGATGTTCTCTCAGGCCTTCACGGTCTA
TGTCGGTGTCGCCGTCGTGGCGCACATCCTGGCCTGGGCGTGGCGTCCGTGGATCCCGGGTGACGAGGGCTTCGGTGCTG
CTCTGATCGAGGGTGCCAACGCCGTCACCGCCGCTGTTCAATCCATCGCGCCCATCGCTGCTTAA

Upstream 100 bases:

>100_bases
ATCGGTCCTCGGTCGGGAAAAACACCACCAAGCGTGGTGACCAACCCGAGCCGCGCGGGGGCGCGCGGCGCAGGCGAAAA
GTCGAACGGAGGAAGTAATT

Downstream 100 bases:

>100_bases
GGAGACGTAATCATGTGGAGAATGTGGAAGATCCTCGACTATCGCCGTACGGTGGTTCTGGCCCACGTGGGCATGGCCGT
CCTGGCTCTGCTTATTCACT

Product: antenna complex, alpha/beta subunit

Products: NA

Alternate protein names: Antenna pigment protein beta-2 chain; EHA-beta-2 [H]

Number of amino acids: Translated: 74; Mature: 73

Protein sequence:

>74_residues
MADEMRNVSDEEAKEFHAMFSQAFTVYVGVAVVAHILAWAWRPWIPGDEGFGAALIEGANAVTAAVQSIAPIAA

Sequences:

>Translated_74_residues
MADEMRNVSDEEAKEFHAMFSQAFTVYVGVAVVAHILAWAWRPWIPGDEGFGAALIEGANAVTAAVQSIAPIAA
>Mature_73_residues
ADEMRNVSDEEAKEFHAMFSQAFTVYVGVAVVAHILAWAWRPWIPGDEGFGAALIEGANAVTAAVQSIAPIAA

Specific function: Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the antena complex beta subunit family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000066
- InterPro:   IPR002362 [H]

Pfam domain/function: PF00556 LHC [H]

EC number: NA

Molecular weight: Translated: 7875; Mature: 7744

Theoretical pI: Translated: 4.17; Mature: 4.17

Prosite motif: PS00969 ANTENNA_COMP_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADEMRNVSDEEAKEFHAMFSQAFTVYVGVAVVAHILAWAWRPWIPGDEGFGAALIEGAN
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCH
AVTAAVQSIAPIAA
HHHHHHHHHHHCCC
>Mature Secondary Structure 
ADEMRNVSDEEAKEFHAMFSQAFTVYVGVAVVAHILAWAWRPWIPGDEGFGAALIEGAN
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCH
AVTAAVQSIAPIAA
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1577009 [H]