| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is bchZ [H]
Identifier: 121998387
GI number: 121998387
Start: 1748451
End: 1749980
Strand: Reverse
Name: bchZ [H]
Synonym: Hhal_1608
Alternate gene names: 121998387
Gene position: 1749980-1748451 (Counterclockwise)
Preceding gene: 121998388
Following gene: 121998386
Centisome position: 65.34
GC content: 63.53
Gene sequence:
>1530_bases ATGCTCATCCCGGATCTCGACCGTGCGGGGGGCTACTGGGGGGCCGTATACGCGTTCACGGCGGTTAAGGGGCTCCAGGT GATCATCGACGGCCCGGTTGGTTGCGAGAACCTCCCGGTCACTGCCGTACTGCATTACACCGACGCCCTGCCGCCCGAGG AGCTCCCGGTCGTCGTCACCGGCCTCTCGGAGGAAGAGCTGAACCGCGAGGGCACCGAGGGTGCCATGAAGCGCGCCCAC GGGACCCTCGACCCACAGCAGCCGAGCGTCGTTGTCACTGGCTCCATCGCCGAGATGATCGGCGGCGGCGTTACTCCGGA GGGAACCGGTATCCGCCGCTTCCTGCCCCGGACCATCGACGAAGACCAGTGGCAGGCCTCGGACCGGGCGCTACGCTGGC TCTGGGAGCAGTTCGGGATGCGCCGGGGGCGCCCGCCTCGTCCGCGGGAGCGGGAGGCCGGCGCTCCGCCTCGAGTCAAC ATCATCGGCCCCGCCTACGGCATGTTCAACATGCCTTCGGATCTTGCCGAGGTCAGGCGGCTGGTCGAAGGGATCGGCGC CGAGGTCAATCTGGTCTTCCCTCTCAGTTGCCACGTGGACCAGATTCCGCGGCTCATCGATGCCGACGTCAACATCTGCA TGTATCGGGAGTACGGCCGTGGGCTGTGTGAAGCCCTCGGGCGCCCGTATCTGCAGGCGCCGGTCGGTCTGCACAGCACC ACGCGTTTCCTGCGCGCGTTGGGTGAGCAGCTTGGGCTCGATCCGGAGCCGTTTATCGAAAAAGAGAAACACACCACGCT AAAACCGCTTTGGGATTTGTGGCGTTCTGTCACGCAGGATTTTTACGCCACGGCGAGTTTTGGCATTGTTGCCGCGCAAA CCCATGCCCAGGGTATTCAGAAATTTCTTGAGAATGATCTGGGTATGCCCTGCAATTTCGCCTTCTCTCGGGCGCCCGGC GTCAAGATTGATAACGACGCCATTCGTGCCGCAATCCGCGGCAACCCGCCACTTGTGCTTTTCGGAAGTTACAACGAGCG GATGTATCTAGCGGAAGTTGGGGGACACGCCAGATATATCCCTGCCTCCTTCCCTGGTGCGGTCATACGCCGCCACACGG GGACCCCGTTCATGGGGTACGGTGGAGCCTGTTACATCGTGCAGGAGGTTTGTAACGCGCTCTTCGACGCCCTGTTCCAC ATCCTGCCGTTAGGTACGGAAATGGATCAGGTGGAGGCCACTCTGGCCCGCGGTTCGCAAGCAGAGAAAACGGCGCAAAA TGTCGCAGCCGACTCGCGAGCCGTCCAGAGCGAGGCCTCCGAAACCTTGACCTGGGATGAAGAGGCTCGAGCGGTCCTCG ACCGCTGGGTACAGGAGCAACCGGTCTTGGTCCGCATATCCGCCACCAAACGGTTGCGTGATGCCGCGGAGCAGCGAGCC AAGCAAGCCGGTGAGACACGAGTCACCGCGGATCGGGTCAAGGGGTGCAGCGACGTGCTGCCAGGGGCAGGGCCGGGGCG CGGCAACTGA
Upstream 100 bases:
>100_bases GAACGGGTGAAACCGGGGGCGTGTGGAGCGAACCACCGCAGATTCCGCCGCGGGTCGAGATCCGCGGCGGTGGCGCCCGG CGGTGCGGGGAGGAGGGCTG
Downstream 100 bases:
>100_bases AGCACAAATAGGGCGCGGCGAAAGCGCGCTGTCCCGTTGAAGCCTTACGCGTTGTGCTTTGTTATAGACGGGTAGAGGCG CAGCGGAGAGTTCGACGAGA
Product: chlorophyllide reductase subunit Z
Products: protochlorophyllide; NADPH; H+
Alternate protein names: Chlorin reductase subunit Z [H]
Number of amino acids: Translated: 509; Mature: 509
Protein sequence:
>509_residues MLIPDLDRAGGYWGAVYAFTAVKGLQVIIDGPVGCENLPVTAVLHYTDALPPEELPVVVTGLSEEELNREGTEGAMKRAH GTLDPQQPSVVVTGSIAEMIGGGVTPEGTGIRRFLPRTIDEDQWQASDRALRWLWEQFGMRRGRPPRPREREAGAPPRVN IIGPAYGMFNMPSDLAEVRRLVEGIGAEVNLVFPLSCHVDQIPRLIDADVNICMYREYGRGLCEALGRPYLQAPVGLHST TRFLRALGEQLGLDPEPFIEKEKHTTLKPLWDLWRSVTQDFYATASFGIVAAQTHAQGIQKFLENDLGMPCNFAFSRAPG VKIDNDAIRAAIRGNPPLVLFGSYNERMYLAEVGGHARYIPASFPGAVIRRHTGTPFMGYGGACYIVQEVCNALFDALFH ILPLGTEMDQVEATLARGSQAEKTAQNVAADSRAVQSEASETLTWDEEARAVLDRWVQEQPVLVRISATKRLRDAAEQRA KQAGETRVTADRVKGCSDVLPGAGPGRGN
Sequences:
>Translated_509_residues MLIPDLDRAGGYWGAVYAFTAVKGLQVIIDGPVGCENLPVTAVLHYTDALPPEELPVVVTGLSEEELNREGTEGAMKRAH GTLDPQQPSVVVTGSIAEMIGGGVTPEGTGIRRFLPRTIDEDQWQASDRALRWLWEQFGMRRGRPPRPREREAGAPPRVN IIGPAYGMFNMPSDLAEVRRLVEGIGAEVNLVFPLSCHVDQIPRLIDADVNICMYREYGRGLCEALGRPYLQAPVGLHST TRFLRALGEQLGLDPEPFIEKEKHTTLKPLWDLWRSVTQDFYATASFGIVAAQTHAQGIQKFLENDLGMPCNFAFSRAPG VKIDNDAIRAAIRGNPPLVLFGSYNERMYLAEVGGHARYIPASFPGAVIRRHTGTPFMGYGGACYIVQEVCNALFDALFH ILPLGTEMDQVEATLARGSQAEKTAQNVAADSRAVQSEASETLTWDEEARAVLDRWVQEQPVLVRISATKRLRDAAEQRA KQAGETRVTADRVKGCSDVLPGAGPGRGN >Mature_509_residues MLIPDLDRAGGYWGAVYAFTAVKGLQVIIDGPVGCENLPVTAVLHYTDALPPEELPVVVTGLSEEELNREGTEGAMKRAH GTLDPQQPSVVVTGSIAEMIGGGVTPEGTGIRRFLPRTIDEDQWQASDRALRWLWEQFGMRRGRPPRPREREAGAPPRVN IIGPAYGMFNMPSDLAEVRRLVEGIGAEVNLVFPLSCHVDQIPRLIDADVNICMYREYGRGLCEALGRPYLQAPVGLHST TRFLRALGEQLGLDPEPFIEKEKHTTLKPLWDLWRSVTQDFYATASFGIVAAQTHAQGIQKFLENDLGMPCNFAFSRAPG VKIDNDAIRAAIRGNPPLVLFGSYNERMYLAEVGGHARYIPASFPGAVIRRHTGTPFMGYGGACYIVQEVCNALFDALFH ILPLGTEMDQVEATLARGSQAEKTAQNVAADSRAVQSEASETLTWDEEARAVLDRWVQEQPVLVRISATKRLRDAAEQRA KQAGETRVTADRVKGCSDVLPGAGPGRGN
Specific function: Converts chlorophylls (Chl) into bacteriochlorophylls (BChl) by reducing ring B of the tetrapyrrole [H]
COG id: COG2710
COG function: function code C; Nitrogenase molybdenum-iron protein, alpha and beta chains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ChlB/BchB/BchZ family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010244 - InterPro: IPR000510 - InterPro: IPR013580 - InterPro: IPR016209 [H]
Pfam domain/function: PF00148 Oxidored_nitro; PF08369 PCP_red [H]
EC number: 1.3.1.33
Molecular weight: Translated: 55738; Mature: 55738
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIPDLDRAGGYWGAVYAFTAVKGLQVIIDGPVGCENLPVTAVLHYTDALPPEELPVVVT CCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCCEEEE GLSEEELNREGTEGAMKRAHGTLDPQQPSVVVTGSIAEMIGGGVTPEGTGIRRFLPRTID CCCHHHHCCCCHHHHHHHHCCCCCCCCCCEEEECCHHHHHCCCCCCCCCCHHHHHCCCCC EDQWQASDRALRWLWEQFGMRRGRPPRPREREAGAPPRVNIIGPAYGMFNMPSDLAEVRR CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHH LVEGIGAEVNLVFPLSCHVDQIPRLIDADVNICMYREYGRGLCEALGRPYLQAPVGLHST HHHHCCCCEEEEEEECCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCCCCCCCHHHH TRFLRALGEQLGLDPEPFIEKEKHTTLKPLWDLWRSVTQDFYATASFGIVAAQTHAQGIQ HHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHH KFLENDLGMPCNFAFSRAPGVKIDNDAIRAAIRGNPPLVLFGSYNERMYLAEVGGHARYI HHHHHCCCCCCCCCCCCCCCCEECHHHHHEEECCCCCEEEEECCCCEEEEEECCCCEEEC PASFPGAVIRRHTGTPFMGYGGACYIVQEVCNALFDALFHILPLGTEMDQVEATLARGSQ CCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCH AEKTAQNVAADSRAVQSEASETLTWDEEARAVLDRWVQEQPVLVRISATKRLRDAAEQRA HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHH KQAGETRVTADRVKGCSDVLPGAGPGRGN HHCCCCCCCHHHHCCHHHCCCCCCCCCCC >Mature Secondary Structure MLIPDLDRAGGYWGAVYAFTAVKGLQVIIDGPVGCENLPVTAVLHYTDALPPEELPVVVT CCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCCEEEE GLSEEELNREGTEGAMKRAHGTLDPQQPSVVVTGSIAEMIGGGVTPEGTGIRRFLPRTID CCCHHHHCCCCHHHHHHHHCCCCCCCCCCEEEECCHHHHHCCCCCCCCCCHHHHHCCCCC EDQWQASDRALRWLWEQFGMRRGRPPRPREREAGAPPRVNIIGPAYGMFNMPSDLAEVRR CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHH LVEGIGAEVNLVFPLSCHVDQIPRLIDADVNICMYREYGRGLCEALGRPYLQAPVGLHST HHHHCCCCEEEEEEECCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCCCCCCCHHHH TRFLRALGEQLGLDPEPFIEKEKHTTLKPLWDLWRSVTQDFYATASFGIVAAQTHAQGIQ HHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHH KFLENDLGMPCNFAFSRAPGVKIDNDAIRAAIRGNPPLVLFGSYNERMYLAEVGGHARYI HHHHHCCCCCCCCCCCCCCCCEECHHHHHEEECCCCCEEEEECCCCEEEEEECCCCEEEC PASFPGAVIRRHTGTPFMGYGGACYIVQEVCNALFDALFHILPLGTEMDQVEATLARGSQ CCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCH AEKTAQNVAADSRAVQSEASETLTWDEEARAVLDRWVQEQPVLVRISATKRLRDAAEQRA HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHH KQAGETRVTADRVKGCSDVLPGAGPGRGN HHCCCCCCCHHHHCCHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: chlorophyllide a; NADP+
Specific reaction: chlorophyllide a + NADP+ = protochlorophyllide + NADPH + H+
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA