| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is ilvB [H]
Identifier: 121998373
GI number: 121998373
Start: 1732693
End: 1734579
Strand: Reverse
Name: ilvB [H]
Synonym: Hhal_1594
Alternate gene names: 121998373
Gene position: 1734579-1732693 (Counterclockwise)
Preceding gene: 121998374
Following gene: 121998372
Centisome position: 64.76
GC content: 65.82
Gene sequence:
>1887_bases ATGGATACCGCAATCGTTAACCCCCAGGCAGAGACTGAAGCAACCAGCCACCCGCTTGCCGGCAAGACCATGAGTGGCGG GGAGATTATTGTCGAGGTCCTGGCCCAGGAGGGGGTCGATACGCTCTTTGGCTATAGCGGCGGTGCCATCCTTCCTACCT ACGACGCCATCTTCAAGTACAACGAGCGTCACCGGAAAGAGCAGGCCGTCGAGGAAGAGGATCCGATCCGGCTGATCGTG CCGGCCAACGAGCAGGGCGCCGGATTCATGGCAGCCGGCTACGCCCGGGCCACCGGCAAGGTCGGCTGCTTCCTGGTGAC CTCCGGGCCGGGGGCGACCAACACGGTCACCCCCATCCGCGACTGCATGGCCGATTCGGTGCCGGTGGTGGCCATCACGG GGCAGGTGCCGACGCACGCCATGGGCACGGATGCGTTCCAAGAGGCGCCCATCGTCAACATCATGGGGAGCTGCGCCAAG CACGTCTTCCTGGTGACCGATCCGGAGCAGCTTGAGGCGACCGTGCGGACGGCCTTCGAGGTGGCTCGTTCCGGGCGTCC GGGCCCCGTGGTGGTCGACGTGCCCAAGAACATGCAGAACTGGATCGGGGAGTTCCGCGGCGAGGGGGTGCTGGAGGTGC GCGGCTATCGCCAGCGCATGGAATCCCTCCGCTCCGCCAAGCTCTCCGATCGCAAATGCCGGGCGTTCATGGAGATGCTC GAGCGCTCCCGCCGGCCTCTGCTCTACGTCGGCGGCGGCGTGGTCAGTGGCGAGGCCCACCAGGAGTTGCGCGACTTCGC CCACACCTTCGGGATCCCCGTGGTCAGTACCCTGATGGGCCTGGGGGCGGTGGATACGACCGATGACCTTTACCTGGGCA TGCTCGGTATGCACGGCACGGCCTACGCCAACTACGCCGTGGAGGACTGTGATTTCCTCATCGCGGTCGGTGCCCGTTTC GATGACCGGGTCGCCGGTAAGGTGGAGGAGTTCGCGCCGCTGGCCGAGCAGATCGCCCACATCGACATCGATGCTGCTGA GATCGGCAAGGTCAAGGGCGTCGACTGGGCGCATGTCGGCGAGGCCGGGCGCAGCCTGCGCCAGCTGTTGCGCTACGGCG AATCCATGGGCTTCGAGCCCCGCTTCGATGCCTGGCTTGAGCACGTGCGCGGGCTGCGTGAGCGCCACCCCATGGATTAC GACCGCGACAGCGCGCTGATCCAGCCCCACTACGTGCTCGAAAAACTCAACGAACTGACTGCCGGCGAGGCGATCATTGC CACCGGCGTCGGGCAGCACCAGATGTGGGCGGCACAGTACTGCGACTTCCGCGGTCCGCGGCAGTGGCTCACCTCCGGCG GACTCGGCACCATGGGCTTCGGGCTGCCAGCGGCCATCGGCGCCTACCTGGGGCGTCCGGACCGGGTGGTCATCGACGTC GATGGCGACGGTTCGCTGCGAATGAACCTCGGTGAGCTAGAGACAGCCACAACCTACAACCTGCCGGTCAAGATCCTGTC GCTGAACAACGTCGGCGACGGCATGGTCCGGCAGTGGCAGAAGCTCTACTTCGGGGATCGCTTCTCCGGGTCGGACAAGT CACTGCACCGCAAGGACTTCATCAAGGCGGCCGAGGCCGATGGCTACGAATTTGCCCGCCGCGTCGCGGACAAGGAGGAA CTCGAGGAGGCCCTGCGCGCGTTTGTCGAGTTCCCTGGGCCCGCCTTCCTGGAGGTTATGATCGATCCGGATGCGGGGGT CTTCCCGATGGTCGGTCCGGGCAGCAGCTACAAGGAGATGGTCACCGGCGATCACATCCCGAGCCGGGATATGGCCCTGC GCCCGCGTACCAAGCTCGAGGACGGCGAGTCGCCGGATCTGTTCTGA
Upstream 100 bases:
>100_bases AGGTCCGCCGGTGTGCGTTCCCCGCGGCGGTCGCGTCGGGCGGCGCGTCCGCCCCGCAGTGTTCGTGGAGCAATCGAGAG GCCGAAGAGCCGTGAGGAAA
Downstream 100 bases:
>100_bases GCAGCCGTCCGGGGTCGGGTCTGTGGGCGGCGATTCGGCGCCGCACGGGGTAGCGCGGCTGGCCGGTGTCTTCCTGGGGG TGTCCCTGGACGGCGAGGGG
Product: acetolactate synthase large subunit
Products: NA
Alternate protein names: AHAS; Acetohydroxy-acid synthase large subunit; ALS [H]
Number of amino acids: Translated: 628; Mature: 628
Protein sequence:
>628_residues MDTAIVNPQAETEATSHPLAGKTMSGGEIIVEVLAQEGVDTLFGYSGGAILPTYDAIFKYNERHRKEQAVEEEDPIRLIV PANEQGAGFMAAGYARATGKVGCFLVTSGPGATNTVTPIRDCMADSVPVVAITGQVPTHAMGTDAFQEAPIVNIMGSCAK HVFLVTDPEQLEATVRTAFEVARSGRPGPVVVDVPKNMQNWIGEFRGEGVLEVRGYRQRMESLRSAKLSDRKCRAFMEML ERSRRPLLYVGGGVVSGEAHQELRDFAHTFGIPVVSTLMGLGAVDTTDDLYLGMLGMHGTAYANYAVEDCDFLIAVGARF DDRVAGKVEEFAPLAEQIAHIDIDAAEIGKVKGVDWAHVGEAGRSLRQLLRYGESMGFEPRFDAWLEHVRGLRERHPMDY DRDSALIQPHYVLEKLNELTAGEAIIATGVGQHQMWAAQYCDFRGPRQWLTSGGLGTMGFGLPAAIGAYLGRPDRVVIDV DGDGSLRMNLGELETATTYNLPVKILSLNNVGDGMVRQWQKLYFGDRFSGSDKSLHRKDFIKAAEADGYEFARRVADKEE LEEALRAFVEFPGPAFLEVMIDPDAGVFPMVGPGSSYKEMVTGDHIPSRDMALRPRTKLEDGESPDLF
Sequences:
>Translated_628_residues MDTAIVNPQAETEATSHPLAGKTMSGGEIIVEVLAQEGVDTLFGYSGGAILPTYDAIFKYNERHRKEQAVEEEDPIRLIV PANEQGAGFMAAGYARATGKVGCFLVTSGPGATNTVTPIRDCMADSVPVVAITGQVPTHAMGTDAFQEAPIVNIMGSCAK HVFLVTDPEQLEATVRTAFEVARSGRPGPVVVDVPKNMQNWIGEFRGEGVLEVRGYRQRMESLRSAKLSDRKCRAFMEML ERSRRPLLYVGGGVVSGEAHQELRDFAHTFGIPVVSTLMGLGAVDTTDDLYLGMLGMHGTAYANYAVEDCDFLIAVGARF DDRVAGKVEEFAPLAEQIAHIDIDAAEIGKVKGVDWAHVGEAGRSLRQLLRYGESMGFEPRFDAWLEHVRGLRERHPMDY DRDSALIQPHYVLEKLNELTAGEAIIATGVGQHQMWAAQYCDFRGPRQWLTSGGLGTMGFGLPAAIGAYLGRPDRVVIDV DGDGSLRMNLGELETATTYNLPVKILSLNNVGDGMVRQWQKLYFGDRFSGSDKSLHRKDFIKAAEADGYEFARRVADKEE LEEALRAFVEFPGPAFLEVMIDPDAGVFPMVGPGSSYKEMVTGDHIPSRDMALRPRTKLEDGESPDLF >Mature_628_residues MDTAIVNPQAETEATSHPLAGKTMSGGEIIVEVLAQEGVDTLFGYSGGAILPTYDAIFKYNERHRKEQAVEEEDPIRLIV PANEQGAGFMAAGYARATGKVGCFLVTSGPGATNTVTPIRDCMADSVPVVAITGQVPTHAMGTDAFQEAPIVNIMGSCAK HVFLVTDPEQLEATVRTAFEVARSGRPGPVVVDVPKNMQNWIGEFRGEGVLEVRGYRQRMESLRSAKLSDRKCRAFMEML ERSRRPLLYVGGGVVSGEAHQELRDFAHTFGIPVVSTLMGLGAVDTTDDLYLGMLGMHGTAYANYAVEDCDFLIAVGARF DDRVAGKVEEFAPLAEQIAHIDIDAAEIGKVKGVDWAHVGEAGRSLRQLLRYGESMGFEPRFDAWLEHVRGLRERHPMDY DRDSALIQPHYVLEKLNELTAGEAIIATGVGQHQMWAAQYCDFRGPRQWLTSGGLGTMGFGLPAAIGAYLGRPDRVVIDV DGDGSLRMNLGELETATTYNLPVKILSLNNVGDGMVRQWQKLYFGDRFSGSDKSLHRKDFIKAAEADGYEFARRVADKEE LEEALRAFVEFPGPAFLEVMIDPDAGVFPMVGPGSSYKEMVTGDHIPSRDMALRPRTKLEDGESPDLF
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Homo sapiens, GI21361361, Length=560, Percent_Identity=25.3571428571429, Blast_Score=129, Evalue=8e-30, Organism=Homo sapiens, GI93004078, Length=600, Percent_Identity=24.1666666666667, Blast_Score=119, Evalue=1e-26, Organism=Escherichia coli, GI1790104, Length=585, Percent_Identity=40.3418803418803, Blast_Score=403, Evalue=1e-113, Organism=Escherichia coli, GI87081685, Length=586, Percent_Identity=39.9317406143345, Blast_Score=399, Evalue=1e-112, Organism=Escherichia coli, GI1786717, Length=567, Percent_Identity=30.1587301587302, Blast_Score=244, Evalue=1e-65, Organism=Escherichia coli, GI1787096, Length=494, Percent_Identity=28.5425101214575, Blast_Score=177, Evalue=2e-45, Organism=Escherichia coli, GI1788716, Length=585, Percent_Identity=27.008547008547, Blast_Score=132, Evalue=7e-32, Organism=Caenorhabditis elegans, GI17542570, Length=523, Percent_Identity=23.3269598470363, Blast_Score=113, Evalue=3e-25, Organism=Caenorhabditis elegans, GI17531299, Length=593, Percent_Identity=25.4637436762226, Blast_Score=105, Evalue=5e-23, Organism=Caenorhabditis elegans, GI17531301, Length=593, Percent_Identity=25.4637436762226, Blast_Score=105, Evalue=6e-23, Organism=Saccharomyces cerevisiae, GI6323755, Length=606, Percent_Identity=42.7392739273927, Blast_Score=447, Evalue=1e-126, Organism=Saccharomyces cerevisiae, GI6320816, Length=506, Percent_Identity=22.1343873517787, Blast_Score=79, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6323073, Length=553, Percent_Identity=22.2423146473779, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI19922626, Length=509, Percent_Identity=25.5402750491159, Blast_Score=111, Evalue=2e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012846 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR000399 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 68660; Mature: 68660
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: PS00187 TPP_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTAIVNPQAETEATSHPLAGKTMSGGEIIVEVLAQEGVDTLFGYSGGAILPTYDAIFKY CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHHHH NERHRKEQAVEEEDPIRLIVPANEQGAGFMAAGYARATGKVGCFLVTSGPGATNTVTPIR HHHHHHHHCCCCCCCEEEEEECCCCCCCEEEECCHHCCCCEEEEEEECCCCCCCCCHHHH DCMADSVPVVAITGQVPTHAMGTDAFQEAPIVNIMGSCAKHVFLVTDPEQLEATVRTAFE HHHHCCCCEEEEECCCCCCCCCCCHHHHCCHHHHHHHHHHEEEEEECHHHHHHHHHHHHH VARSGRPGPVVVDVPKNMQNWIGEFRGEGVLEVRGYRQRMESLRSAKLSDRKCRAFMEML HHHCCCCCCEEEECCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHH ERSRRPLLYVGGGVVSGEAHQELRDFAHTFGIPVVSTLMGLGAVDTTDDLYLGMLGMHGT HHCCCCEEEECCEEECCHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCHHHHHHCCCCC AYANYAVEDCDFLIAVGARFDDRVAGKVEEFAPLAEQIAHIDIDAAEIGKVKGVDWAHVG HHCCCHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHH EAGRSLRQLLRYGESMGFEPRFDAWLEHVRGLRERHPMDYDRDSALIQPHYVLEKLNELT HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEECHHHHHHHHHHHH AGEAIIATGVGQHQMWAAQYCDFRGPRQWLTSGGLGTMGFGLPAAIGAYLGRPDRVVIDV CCCEEEEECCCCHHHHHHHHCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEEE DGDGSLRMNLGELETATTYNLPVKILSLNNVGDGMVRQWQKLYFGDRFSGSDKSLHRKDF CCCCCEEEECCCCCCCEEECCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHH IKAAEADGYEFARRVADKEELEEALRAFVEFPGPAFLEVMIDPDAGVFPMVGPGSSYKEM HHHHCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCHHHH VTGDHIPSRDMALRPRTKLEDGESPDLF HCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDTAIVNPQAETEATSHPLAGKTMSGGEIIVEVLAQEGVDTLFGYSGGAILPTYDAIFKY CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHHHH NERHRKEQAVEEEDPIRLIVPANEQGAGFMAAGYARATGKVGCFLVTSGPGATNTVTPIR HHHHHHHHCCCCCCCEEEEEECCCCCCCEEEECCHHCCCCEEEEEEECCCCCCCCCHHHH DCMADSVPVVAITGQVPTHAMGTDAFQEAPIVNIMGSCAKHVFLVTDPEQLEATVRTAFE HHHHCCCCEEEEECCCCCCCCCCCHHHHCCHHHHHHHHHHEEEEEECHHHHHHHHHHHHH VARSGRPGPVVVDVPKNMQNWIGEFRGEGVLEVRGYRQRMESLRSAKLSDRKCRAFMEML HHHCCCCCCEEEECCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHH ERSRRPLLYVGGGVVSGEAHQELRDFAHTFGIPVVSTLMGLGAVDTTDDLYLGMLGMHGT HHCCCCEEEECCEEECCHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCHHHHHHCCCCC AYANYAVEDCDFLIAVGARFDDRVAGKVEEFAPLAEQIAHIDIDAAEIGKVKGVDWAHVG HHCCCHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHH EAGRSLRQLLRYGESMGFEPRFDAWLEHVRGLRERHPMDYDRDSALIQPHYVLEKLNELT HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEECHHHHHHHHHHHH AGEAIIATGVGQHQMWAAQYCDFRGPRQWLTSGGLGTMGFGLPAAIGAYLGRPDRVVIDV CCCEEEEECCCCHHHHHHHHCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEEE DGDGSLRMNLGELETATTYNLPVKILSLNNVGDGMVRQWQKLYFGDRFSGSDKSLHRKDF CCCCCEEEECCCCCCCEEECCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHH IKAAEADGYEFARRVADKEELEEALRAFVEFPGPAFLEVMIDPDAGVFPMVGPGSSYKEM HHHHCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCHHHH VTGDHIPSRDMALRPRTKLEDGESPDLF HCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12917641 [H]