| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is htpG
Identifier: 121998371
GI number: 121998371
Start: 1730162
End: 1732063
Strand: Reverse
Name: htpG
Synonym: Hhal_1592
Alternate gene names: 121998371
Gene position: 1732063-1730162 (Counterclockwise)
Preceding gene: 121998372
Following gene: 121998370
Centisome position: 64.67
GC content: 63.72
Gene sequence:
>1902_bases ATGAGCGCAGATACGCAGAGCGAGACCCTCGAATTCCAGGCCGAGGTTCAGCAGCTGCTGAGCCTGATGATTCACTCGGT GTACTCGAACCGGGAGGTCTTCCTCCGCGAGCTCATCTCCAACGCCTCGGATGCCATCGATAAGCTGCGCTTCGAGGCGC TTCAGCAGGAATCCCTCTACGAAGACGATCCGGAACTCAAGATCCGCGTCGAGGCCGATCCAGAGGCCCGCACCGTCACC GTGATCGACAACGGCATCGGCATGAGTCGCGAGGATGTGATCGAAAACCTCGGGACCATCGCCCACTCGGGGACCCGCCG TTTCCTTGAGCAGCTGACGGGTGATCAGCACAAGGATGCGCAGCTGATCGGCCAGTTCGGTGTCGGATTTTATTCGGCCT TTGTGGTCGCCGACCGGGTTGAGGTCTACACCCGCAAGGCCGGCGCCGCTGCAGCTGAGGGCGTGCGCTGGAGTTCTGAT GGCCAGGGGGCCTACACCGTCGACACCGTCGAGCGCGCCGAGCGCGGCACCGCCGTGGTGCTGCACCTCCCCGAGGCGCA GCAGGAGTTCTGCGACGACATGCGCCTGCGCCAGATCATCCGCAAGTACTCCGACCATATCTCGGTCCCCATCGAGATGC CGGTGCGCAACGCGGACCAGGGTGATGACGCGGACAGTGAGGCCGAGGCCCCGCAGTGGGAGATCGTCAACCGCGCCTCG GCGCTGTGGATGCGGCCGAAGAGCGAGATCTCCGAGGAAGATTATCAAGAGCTGTACAAGCACGTCGCCCACGACTTCGA CGATCCCCTGACCTGGATCCACAACCATGTCGAGGGGCGCCAGTCCTATGTCTCGTTGCTCTACATCCCCAAGCGCCCTC CGTTCGATCTCTACGAGCAGAAGCCGGCCCACGGGGTCAAGCTCTATGTGCGGCGCGTCTTCATCACCGAGGATACGGAG CACCTGCTGCCGCGCTACCTGCGTTTCGTCCGGGGCGTCATCGACTCGGACGATCTGCCGCTGAACATCTCCCGGGAGAT GTTGCAGCACAACCCGATGATCAGCTCGCTGCGTTCGGCCTCGGTCAAGCGCATCCTCGACCGGCTCGAGTGCATGGCGA AGAACGAGCCGGAGGACTACGCCACCTTCTGGCAGGCCTTTGGGCGGGTCTTCAAGGAGGGCATCGCCGAGGATCCGGGC AACCGGGAGCGCATCGCGCGGCTGCTGCGCTTCTCCTCGACCCACGAAGAGAAGGAGACGCCGGACGTCAGTCTGGACGA CTACGTCGCCCGGATGAAGGACGGCCAGGAGAAGATCTACTACGTAACGGCGGAGAGCTTCAACGCCGCGCGGAATAGCC CGCATCTGGAGATCTTCCGTCGCCACGGCATCGAGGTCCTGCTGCTCCCGGATCCCGTCGACGAGTGGTTGGTGGCCCAT CTGCACGAGTACGATGGCAAGCAGCTGGCGTCGGTGGCCAAGGGTGAGCTCGATCTGGAGGCCCTCGGCGAAGAGGACGA CAAGCAGGCGCGGCAGGAGAAGGAGCAGGCCTACGAAGACCTCTGTAAGCGTCTGGGTGAGACCCTGGGTGAGCGGGTCA GCGAGGTCCGGGTCAGCCACCGCCTGACCGATTCGCCGGCCTGCCTGGTCGTCGGCGAGTACGATTTCGGCATGGGCATG CAGCGCCTGTTGCAGGCTGCCGGGCATCAGCTTCCTGCAGGTCAACCGGCGCTGGAGGTTAATCCGGATCACTCCGTGAT TGAGCGATTGGCGACGGAGTCGGGACAGCGCTTCGAAGACTGGGCCTTGACGCTCTACGAGCAGTCGCTGCTCGCCGAGG GAGGGCAGCTGGAGGATCCAGCCGCGTATGTCCGACGTGTTAATAACCTCCTGGCTGGCTAG
Upstream 100 bases:
>100_bases AAAGCCGGTCAGGCGTTCCCACATCCGGTCGACACAACCCGCCGCCGGGATCCGGCGAGCGAGCCCACGTGTTCAACGAG AGGAGCAGGGGATCCCATCC
Downstream 100 bases:
>100_bases GGGAGTGTGAGGATGGCATCGAGACCTCCGGACGAGCCGTCGACGGCGGCCTTTGAACTCAAGGGCCGCATGGCGACGCT GACCGTGGTCCGGGTCCTGA
Product: heat shock protein 90
Products: NA
Alternate protein names: Heat shock protein htpG; High temperature protein G
Number of amino acids: Translated: 633; Mature: 632
Protein sequence:
>633_residues MSADTQSETLEFQAEVQQLLSLMIHSVYSNREVFLRELISNASDAIDKLRFEALQQESLYEDDPELKIRVEADPEARTVT VIDNGIGMSREDVIENLGTIAHSGTRRFLEQLTGDQHKDAQLIGQFGVGFYSAFVVADRVEVYTRKAGAAAAEGVRWSSD GQGAYTVDTVERAERGTAVVLHLPEAQQEFCDDMRLRQIIRKYSDHISVPIEMPVRNADQGDDADSEAEAPQWEIVNRAS ALWMRPKSEISEEDYQELYKHVAHDFDDPLTWIHNHVEGRQSYVSLLYIPKRPPFDLYEQKPAHGVKLYVRRVFITEDTE HLLPRYLRFVRGVIDSDDLPLNISREMLQHNPMISSLRSASVKRILDRLECMAKNEPEDYATFWQAFGRVFKEGIAEDPG NRERIARLLRFSSTHEEKETPDVSLDDYVARMKDGQEKIYYVTAESFNAARNSPHLEIFRRHGIEVLLLPDPVDEWLVAH LHEYDGKQLASVAKGELDLEALGEEDDKQARQEKEQAYEDLCKRLGETLGERVSEVRVSHRLTDSPACLVVGEYDFGMGM QRLLQAAGHQLPAGQPALEVNPDHSVIERLATESGQRFEDWALTLYEQSLLAEGGQLEDPAAYVRRVNNLLAG
Sequences:
>Translated_633_residues MSADTQSETLEFQAEVQQLLSLMIHSVYSNREVFLRELISNASDAIDKLRFEALQQESLYEDDPELKIRVEADPEARTVT VIDNGIGMSREDVIENLGTIAHSGTRRFLEQLTGDQHKDAQLIGQFGVGFYSAFVVADRVEVYTRKAGAAAAEGVRWSSD GQGAYTVDTVERAERGTAVVLHLPEAQQEFCDDMRLRQIIRKYSDHISVPIEMPVRNADQGDDADSEAEAPQWEIVNRAS ALWMRPKSEISEEDYQELYKHVAHDFDDPLTWIHNHVEGRQSYVSLLYIPKRPPFDLYEQKPAHGVKLYVRRVFITEDTE HLLPRYLRFVRGVIDSDDLPLNISREMLQHNPMISSLRSASVKRILDRLECMAKNEPEDYATFWQAFGRVFKEGIAEDPG NRERIARLLRFSSTHEEKETPDVSLDDYVARMKDGQEKIYYVTAESFNAARNSPHLEIFRRHGIEVLLLPDPVDEWLVAH LHEYDGKQLASVAKGELDLEALGEEDDKQARQEKEQAYEDLCKRLGETLGERVSEVRVSHRLTDSPACLVVGEYDFGMGM QRLLQAAGHQLPAGQPALEVNPDHSVIERLATESGQRFEDWALTLYEQSLLAEGGQLEDPAAYVRRVNNLLAG >Mature_632_residues SADTQSETLEFQAEVQQLLSLMIHSVYSNREVFLRELISNASDAIDKLRFEALQQESLYEDDPELKIRVEADPEARTVTV IDNGIGMSREDVIENLGTIAHSGTRRFLEQLTGDQHKDAQLIGQFGVGFYSAFVVADRVEVYTRKAGAAAAEGVRWSSDG QGAYTVDTVERAERGTAVVLHLPEAQQEFCDDMRLRQIIRKYSDHISVPIEMPVRNADQGDDADSEAEAPQWEIVNRASA LWMRPKSEISEEDYQELYKHVAHDFDDPLTWIHNHVEGRQSYVSLLYIPKRPPFDLYEQKPAHGVKLYVRRVFITEDTEH LLPRYLRFVRGVIDSDDLPLNISREMLQHNPMISSLRSASVKRILDRLECMAKNEPEDYATFWQAFGRVFKEGIAEDPGN RERIARLLRFSSTHEEKETPDVSLDDYVARMKDGQEKIYYVTAESFNAARNSPHLEIFRRHGIEVLLLPDPVDEWLVAHL HEYDGKQLASVAKGELDLEALGEEDDKQARQEKEQAYEDLCKRLGETLGERVSEVRVSHRLTDSPACLVVGEYDFGMGMQ RLLQAAGHQLPAGQPALEVNPDHSVIERLATESGQRFEDWALTLYEQSLLAEGGQLEDPAAYVRRVNNLLAG
Specific function: Molecular chaperone. Has ATPase activity
COG id: COG0326
COG function: function code O; Molecular chaperone, HSP90 family
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the heat shock protein 90 family
Homologues:
Organism=Homo sapiens, GI20149594, Length=683, Percent_Identity=38.506588579795, Blast_Score=462, Evalue=1e-130, Organism=Homo sapiens, GI4507677, Length=682, Percent_Identity=35.9237536656891, Blast_Score=431, Evalue=1e-120, Organism=Homo sapiens, GI155722983, Length=643, Percent_Identity=36.2363919129082, Blast_Score=383, Evalue=1e-106, Organism=Homo sapiens, GI154146191, Length=410, Percent_Identity=39.7560975609756, Blast_Score=300, Evalue=2e-81, Organism=Homo sapiens, GI153792590, Length=410, Percent_Identity=39.7560975609756, Blast_Score=297, Evalue=2e-80, Organism=Escherichia coli, GI1786679, Length=627, Percent_Identity=55.0239234449761, Blast_Score=712, Evalue=0.0, Organism=Caenorhabditis elegans, GI17559162, Length=670, Percent_Identity=38.5074626865672, Blast_Score=476, Evalue=1e-134, Organism=Caenorhabditis elegans, GI17542208, Length=675, Percent_Identity=35.8518518518519, Blast_Score=410, Evalue=1e-115, Organism=Caenorhabditis elegans, GI115535205, Length=643, Percent_Identity=34.6811819595645, Blast_Score=358, Evalue=4e-99, Organism=Caenorhabditis elegans, GI115535167, Length=430, Percent_Identity=37.2093023255814, Blast_Score=280, Evalue=2e-75, Organism=Saccharomyces cerevisiae, GI6325016, Length=690, Percent_Identity=38.1159420289855, Blast_Score=478, Evalue=1e-135, Organism=Saccharomyces cerevisiae, GI6323840, Length=685, Percent_Identity=38.2481751824818, Blast_Score=477, Evalue=1e-135, Organism=Drosophila melanogaster, GI17647529, Length=684, Percent_Identity=38.4502923976608, Blast_Score=490, Evalue=1e-138, Organism=Drosophila melanogaster, GI21357739, Length=683, Percent_Identity=36.4568081991215, Blast_Score=421, Evalue=1e-118, Organism=Drosophila melanogaster, GI24586016, Length=644, Percent_Identity=36.4906832298137, Blast_Score=391, Evalue=1e-109,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 2419 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): HTPG_HALHL (A1WXE4)
Other databases:
- EMBL: CP000544 - RefSeq: YP_001003158.1 - ProteinModelPortal: A1WXE4 - STRING: A1WXE4 - GeneID: 4709082 - GenomeReviews: CP000544_GR - KEGG: hha:Hhal_1592 - eggNOG: COG0326 - HOGENOM: HBG631012 - OMA: AIYYITA - PhylomeDB: A1WXE4 - ProtClustDB: PRK05218 - BioCyc: HHAL349124:HHAL_1592-MONOMER - GO: GO:0005737 - HAMAP: MF_00505 - InterPro: IPR003594 - InterPro: IPR019805 - InterPro: IPR001404 - InterPro: IPR020575 - InterPro: IPR020568 - Gene3D: G3DSA:3.30.565.10 - PANTHER: PTHR11528 - PIRSF: PIRSF002583 - PRINTS: PR00775 - SMART: SM00387
Pfam domain/function: PF02518 HATPase_c; PF00183 HSP90; SSF55874 ATP_bd_ATPase; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: NA
Molecular weight: Translated: 71996; Mature: 71865
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: PS00298 HSP90
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSADTQSETLEFQAEVQQLLSLMIHSVYSNREVFLRELISNASDAIDKLRFEALQQESLY CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC EDDPELKIRVEADPEARTVTVIDNGIGMSREDVIENLGTIAHSGTRRFLEQLTGDQHKDA CCCCCEEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH QLIGQFGVGFYSAFVVADRVEVYTRKAGAAAAEGVRWSSDGQGAYTVDTVERAERGTAVV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCEECCCCCCCEEHHHHHHHCCCCEEE LHLPEAQQEFCDDMRLRQIIRKYSDHISVPIEMPVRNADQGDDADSEAEAPQWEIVNRAS EECCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHH ALWMRPKSEISEEDYQELYKHVAHDFDDPLTWIHNHVEGRQSYVSLLYIPKRPPFDLYEQ HHHCCCHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEEEECCCCCCCHHHC KPAHGVKLYVRRVFITEDTEHLLPRYLRFVRGVIDSDDLPLNISREMLQHNPMISSLRSA CCCCCCEEHHHHHEECCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHH SVKRILDRLECMAKNEPEDYATFWQAFGRVFKEGIAEDPGNRERIARLLRFSSTHEEKET HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCC PDVSLDDYVARMKDGQEKIYYVTAESFNAARNSPHLEIFRRHGIEVLLLPDPVDEWLVAH CCCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHCCCEEEEECCCHHHHHHHH LHEYDGKQLASVAKGELDLEALGEEDDKQARQEKEQAYEDLCKRLGETLGERVSEVRVSH HHHCCCHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLTDSPACLVVGEYDFGMGMQRLLQAAGHQLPAGQPALEVNPDHSVIERLATESGQRFED HCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHCCCCHHH WALTLYEQSLLAEGGQLEDPAAYVRRVNNLLAG HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure SADTQSETLEFQAEVQQLLSLMIHSVYSNREVFLRELISNASDAIDKLRFEALQQESLY CCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC EDDPELKIRVEADPEARTVTVIDNGIGMSREDVIENLGTIAHSGTRRFLEQLTGDQHKDA CCCCCEEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH QLIGQFGVGFYSAFVVADRVEVYTRKAGAAAAEGVRWSSDGQGAYTVDTVERAERGTAVV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCEECCCCCCCEEHHHHHHHCCCCEEE LHLPEAQQEFCDDMRLRQIIRKYSDHISVPIEMPVRNADQGDDADSEAEAPQWEIVNRAS EECCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHH ALWMRPKSEISEEDYQELYKHVAHDFDDPLTWIHNHVEGRQSYVSLLYIPKRPPFDLYEQ HHHCCCHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEEEECCCCCCCHHHC KPAHGVKLYVRRVFITEDTEHLLPRYLRFVRGVIDSDDLPLNISREMLQHNPMISSLRSA CCCCCCEEHHHHHEECCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHH SVKRILDRLECMAKNEPEDYATFWQAFGRVFKEGIAEDPGNRERIARLLRFSSTHEEKET HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCC PDVSLDDYVARMKDGQEKIYYVTAESFNAARNSPHLEIFRRHGIEVLLLPDPVDEWLVAH CCCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHCCCEEEEECCCHHHHHHHH LHEYDGKQLASVAKGELDLEALGEEDDKQARQEKEQAYEDLCKRLGETLGERVSEVRVSH HHHCCCHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLTDSPACLVVGEYDFGMGMQRLLQAAGHQLPAGQPALEVNPDHSVIERLATESGQRFED HCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHCCCCHHH WALTLYEQSLLAEGGQLEDPAAYVRRVNNLLAG HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA