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The map label for this gene is yafS [C]

Identifier: 121998365

GI number: 121998365

Start: 1724854

End: 1725585

Strand: Reverse

Name: yafS [C]

Synonym: Hhal_1586

Alternate gene names: 121998365

Gene position: 1725585-1724854 (Counterclockwise)

Preceding gene: 121998368

Following gene: 121998364

Centisome position: 64.42

GC content: 68.72

Gene sequence:

>732_bases
ATGCAACACCTTCACGCCTGGTACGGCACGCCCCTGGGGCAGCGGGTCGGCCGTGCCGAACAAAGCGCGGTGGCCGATTC
CCTGGCGCACTTGGGGATTGGGGACGTGCTATGTCTGGGCCCGGTGGCCGCTCCCCTGCCCTTGGCACCGACCGTTCGCC
AGTGGCGGGTCGGAGCTGGACGGGACCTTGTGGCGGCCCCGCAGCAGCTGCCTTTCCGCGGTCAGAGCATCGATGCCCTG
ATCCTCAGCCACGTCCTTGAGTTCAATGCGGAGCCGGGGGCCGTGTTATCCGAGGCCTATCAGGTGTTGGCTCCGGAAGG
CCGACTGATGGTCCTGACCTTCAACCCCCTGGGGCTGTGGGGGGCACGTCGGTTGTGGGGGCGGTGGCGCTCGGCCCCGG
TACCCTGGGGCGGCCGCCAGTGGCTTGCCTCCACCGTCGGGGTGCATCTGCGACGCTGCGGCTTTGAGACCGTGGCTCGG
CACGATCTCTGTTTTCGGCCACCTATCCAGGGAGAGCGCCTGCAAAAGCGTCTGGATCCATGGGAGGATAGGCTCCGCCG
GCTCGGCCGCTTCGCCGCCGGCGTACAGATCACCGTAGCGATCCGGCGTGAGCCAGGGTCACTGCGAGGGAAAACCCGGG
TCGAGCGCTTAGGTCGAGGCGTCCCCGTCGGGGCTGCGCACCCGGTGGGCCGGATCTGCGCGCAGGCCCAGAAGCGAGGA
GGTAGTGCGTGA

Upstream 100 bases:

>100_bases
CCCCCGACGGGGTGTTCCCACGTGGCTGCGGTGGTGGGTGGGTGAGTTCGGTGCGGCGCTCGGGTAAGGTTGGGCGGGGA
GCGTCTAAAACGGGGGGCGC

Downstream 100 bases:

>100_bases
CCGAGCAGCGCGGCGTGGTGGAGGCATTCACGGATGGGGCCTGTCGAGGTAATCCGGGCCCCGGAGGGTGGGGCGTGCTG
CTACGCTACGGCGAGCATGA

Product: type 11 methyltransferase

Products: NA

Alternate protein names: Generic Methyl-Transferase; Methyl-Transferase

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MQHLHAWYGTPLGQRVGRAEQSAVADSLAHLGIGDVLCLGPVAAPLPLAPTVRQWRVGAGRDLVAAPQQLPFRGQSIDAL
ILSHVLEFNAEPGAVLSEAYQVLAPEGRLMVLTFNPLGLWGARRLWGRWRSAPVPWGGRQWLASTVGVHLRRCGFETVAR
HDLCFRPPIQGERLQKRLDPWEDRLRRLGRFAAGVQITVAIRREPGSLRGKTRVERLGRGVPVGAAHPVGRICAQAQKRG
GSA

Sequences:

>Translated_243_residues
MQHLHAWYGTPLGQRVGRAEQSAVADSLAHLGIGDVLCLGPVAAPLPLAPTVRQWRVGAGRDLVAAPQQLPFRGQSIDAL
ILSHVLEFNAEPGAVLSEAYQVLAPEGRLMVLTFNPLGLWGARRLWGRWRSAPVPWGGRQWLASTVGVHLRRCGFETVAR
HDLCFRPPIQGERLQKRLDPWEDRLRRLGRFAAGVQITVAIRREPGSLRGKTRVERLGRGVPVGAAHPVGRICAQAQKRG
GSA
>Mature_243_residues
MQHLHAWYGTPLGQRVGRAEQSAVADSLAHLGIGDVLCLGPVAAPLPLAPTVRQWRVGAGRDLVAAPQQLPFRGQSIDAL
ILSHVLEFNAEPGAVLSEAYQVLAPEGRLMVLTFNPLGLWGARRLWGRWRSAPVPWGGRQWLASTVGVHLRRCGFETVAR
HDLCFRPPIQGERLQKRLDPWEDRLRRLGRFAAGVQITVAIRREPGSLRGKTRVERLGRGVPVGAAHPVGRICAQAQKRG
GSA

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26581; Mature: 26581

Theoretical pI: Translated: 11.92; Mature: 11.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHLHAWYGTPLGQRVGRAEQSAVADSLAHLGIGDVLCLGPVAAPLPLAPTVRQWRVGAG
CCCCHHHHCCCHHHHHCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCHHHHCCCCC
RDLVAAPQQLPFRGQSIDALILSHVLEFNAEPGAVLSEAYQVLAPEGRLMVLTFNPLGLW
CCHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCHH
GARRLWGRWRSAPVPWGGRQWLASTVGVHLRRCGFETVARHDLCFRPPIQGERLQKRLDP
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCHHHHHHHCCH
WEDRLRRLGRFAAGVQITVAIRREPGSLRGKTRVERLGRGVPVGAAHPVGRICAQAQKRG
HHHHHHHHHHHHCCEEEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC
GSA
CCC
>Mature Secondary Structure
MQHLHAWYGTPLGQRVGRAEQSAVADSLAHLGIGDVLCLGPVAAPLPLAPTVRQWRVGAG
CCCCHHHHCCCHHHHHCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCHHHHCCCCC
RDLVAAPQQLPFRGQSIDALILSHVLEFNAEPGAVLSEAYQVLAPEGRLMVLTFNPLGLW
CCHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCHH
GARRLWGRWRSAPVPWGGRQWLASTVGVHLRRCGFETVARHDLCFRPPIQGERLQKRLDP
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCHHHHHHHCCH
WEDRLRRLGRFAAGVQITVAIRREPGSLRGKTRVERLGRGVPVGAAHPVGRICAQAQKRG
HHHHHHHHHHHHCCEEEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC
GSA
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA