The gene/protein map for NC_008789 is currently unavailable.
Definition Halorhodospira halophila SL1 chromosome, complete genome.
Accession NC_008789
Length 2,678,452

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The map label for this gene is 121998362

Identifier: 121998362

GI number: 121998362

Start: 1723707

End: 1724039

Strand: Reverse

Name: 121998362

Synonym: Hhal_1583

Alternate gene names: NA

Gene position: 1724039-1723707 (Counterclockwise)

Preceding gene: 121998363

Following gene: 121998361

Centisome position: 64.37

GC content: 66.37

Gene sequence:

>333_bases
ATGTTCCGTCGGCTGCGTAGTTGGGTCGGGGTCGGGATCCTGGGTGGCACAGGCGCCCTGATAGCGGGGTGTGGCGGCGG
CGACGCCGGCACCCTGGCGGCCGACTACTGCGACTACATTCGTCACGCCGACGACATGAGCTTCGAGGAGCAGCAGGAGA
CTATCACGGCACTCGACGAGCGTTACCAGCGCAAGGGCATCCGGGAGAGCAGCATTCGCGTGGCGATCCAGCGCGAGTGT
CCGGACGCCCTCGCCGAGCATGATGTCCGCATGCTTGGCCTGCTCGGTGAGACGCTGCGCGAGATGCGTGACGAGCTGCA
GGAGCTGCGATAG

Upstream 100 bases:

>100_bases
GCAGACGGGCGAACTGATCGACATTCCCGCCGGCATGAACGTCCGGTTCAAGCCGGGCGCGCCGCTCAAGCGCTCCGTGG
ATCAGTAGCAGGAGGCTGCC

Downstream 100 bases:

>100_bases
CCCCGGCCCCGGGAAGCGGATCCTCCCGGGGTCGCACCGTGTTAGTGCGAACGCGCTCCCGGCTGCATCAATATGGTGCG
CCCAGCCCCCGATGTGTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MFRRLRSWVGVGILGGTGALIAGCGGGDAGTLAADYCDYIRHADDMSFEEQQETITALDERYQRKGIRESSIRVAIQREC
PDALAEHDVRMLGLLGETLREMRDELQELR

Sequences:

>Translated_110_residues
MFRRLRSWVGVGILGGTGALIAGCGGGDAGTLAADYCDYIRHADDMSFEEQQETITALDERYQRKGIRESSIRVAIQREC
PDALAEHDVRMLGLLGETLREMRDELQELR
>Mature_110_residues
MFRRLRSWVGVGILGGTGALIAGCGGGDAGTLAADYCDYIRHADDMSFEEQQETITALDERYQRKGIRESSIRVAIQREC
PDALAEHDVRMLGLLGETLREMRDELQELR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12302; Mature: 12302

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRRLRSWVGVGILGGTGALIAGCGGGDAGTLAADYCDYIRHADDMSFEEQQETITALDE
CHHHHHHHHCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
RYQRKGIRESSIRVAIQRECPDALAEHDVRMLGLLGETLREMRDELQELR
HHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFRRLRSWVGVGILGGTGALIAGCGGGDAGTLAADYCDYIRHADDMSFEEQQETITALDE
CHHHHHHHHCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
RYQRKGIRESSIRVAIQRECPDALAEHDVRMLGLLGETLREMRDELQELR
HHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA