| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
Click here to switch to the map view.
The map label for this gene is 121998349
Identifier: 121998349
GI number: 121998349
Start: 1710618
End: 1711532
Strand: Reverse
Name: 121998349
Synonym: Hhal_1570
Alternate gene names: NA
Gene position: 1711532-1710618 (Counterclockwise)
Preceding gene: 121998350
Following gene: 121998348
Centisome position: 63.9
GC content: 62.51
Gene sequence:
>915_bases ATGGCAAGTGCAACACGGCTAGCCTGTGCTGAGGCACTGGAGGAGGCGACCGTCTTCCGCATTGAAGGGGAAGAGTTGCC CGGCATCCTCCACCGCCCGTTGCAAAGCGCTGAGCGTGGTCTTCTGTTGGTCGTCGGTGGTCCGCAGTATCGGATCGGTA GTCACCGACAGTTTCTCCTGCTCGCCCGCTACCTAGCGGAGCACGGGGTTCCGGTCTTTCGTTTTGACTATCGAGGCATG GGAGATGCGGGTGGCGAGCAGCGCGGCTACGACGCTGTAGAGACGGATATCGGCTGCGCGATCGATGAGTTTCAGCGGCT TACTCCAGCGGTTCGCGAGGTTGTGGTTTGGGGGTTGTGTGATGCGGCCTCCGCGGCATTGCTCTATGCGTCGCAGGATC GCCGAATCAGCGGGCTTGTGCTCCTCAATCCTTGGGTGCGCACTGAGGCCGGGATTGCCAGTGCTTATCTGCGCCACTAC TACTGGCGGCAACTGTTCAGTGGGGACTTCTGGATGCGCCTCCTCACGGGGCGACTCAGTCTGACGAGATCTGCCCGCGG GCTAATGGAAAAGGTAGCTGTTGTCCTGCGGGCGAATGCGCGGCGTGGCCATTGGCCGGAGGGTCAGTCAGCAGGTTTGG CCCCTGGGGATCCTCTCCCGGTGCGCATGGCAGCCGGCTGGCGCCGCTTCGACGGGCCGATCCTGCTCGTGCTTAGCGGA GACGACCTGACTGCGGCCGAGTTTGTCGATACGGCGACACGAAACGACTCGTGGCTTGGGCTGCTTGATCAGGAACGAGT TACTACCCGCCGCCTGGAGGGAGCGGATCACACCTTCTCTCGTGCCGTCTGGCGCAATCAGGTGGCGGAATGGACGCTGC AGTGGCTTGAAGCGAGCCGTCGTGATGGGTGCTGA
Upstream 100 bases:
>100_bases GTCAAGAAGTGCGGGTGGAGGCACAAGCCCTCCCCGGGGAGCCGTTTTGGGCAACCCAGGAGATTGGTACGGCACCTGCC TTGATTGAGGAAACCACGCG
Downstream 100 bases:
>100_bases ATGAAGATTGACAGACCGCCTGCCACCCTGCTGCTGGGGCATTTCCCGCGGATTGTGGTGCCCGTCGCGCGTTGTCTGAG TGGCAAGGGAATCCCAGTCT
Product: esterase/lipase/thioesterase family protein
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold; Esterase/Lipase/Thioesterase
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MASATRLACAEALEEATVFRIEGEELPGILHRPLQSAERGLLLVVGGPQYRIGSHRQFLLLARYLAEHGVPVFRFDYRGM GDAGGEQRGYDAVETDIGCAIDEFQRLTPAVREVVVWGLCDAASAALLYASQDRRISGLVLLNPWVRTEAGIASAYLRHY YWRQLFSGDFWMRLLTGRLSLTRSARGLMEKVAVVLRANARRGHWPEGQSAGLAPGDPLPVRMAAGWRRFDGPILLVLSG DDLTAAEFVDTATRNDSWLGLLDQERVTTRRLEGADHTFSRAVWRNQVAEWTLQWLEASRRDGC
Sequences:
>Translated_304_residues MASATRLACAEALEEATVFRIEGEELPGILHRPLQSAERGLLLVVGGPQYRIGSHRQFLLLARYLAEHGVPVFRFDYRGM GDAGGEQRGYDAVETDIGCAIDEFQRLTPAVREVVVWGLCDAASAALLYASQDRRISGLVLLNPWVRTEAGIASAYLRHY YWRQLFSGDFWMRLLTGRLSLTRSARGLMEKVAVVLRANARRGHWPEGQSAGLAPGDPLPVRMAAGWRRFDGPILLVLSG DDLTAAEFVDTATRNDSWLGLLDQERVTTRRLEGADHTFSRAVWRNQVAEWTLQWLEASRRDGC >Mature_303_residues ASATRLACAEALEEATVFRIEGEELPGILHRPLQSAERGLLLVVGGPQYRIGSHRQFLLLARYLAEHGVPVFRFDYRGMG DAGGEQRGYDAVETDIGCAIDEFQRLTPAVREVVVWGLCDAASAALLYASQDRRISGLVLLNPWVRTEAGIASAYLRHYY WRQLFSGDFWMRLLTGRLSLTRSARGLMEKVAVVLRANARRGHWPEGQSAGLAPGDPLPVRMAAGWRRFDGPILLVLSGD DLTAAEFVDTATRNDSWLGLLDQERVTTRRLEGADHTFSRAVWRNQVAEWTLQWLEASRRDGC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33952; Mature: 33821
Theoretical pI: Translated: 7.12; Mature: 7.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASATRLACAEALEEATVFRIEGEELPGILHRPLQSAERGLLLVVGGPQYRIGSHRQFLL CCCHHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCEECCCCHHHHH LARYLAEHGVPVFRFDYRGMGDAGGEQRGYDAVETDIGCAIDEFQRLTPAVREVVVWGLC HHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH DAASAALLYASQDRRISGLVLLNPWVRTEAGIASAYLRHYYWRQLFSGDFWMRLLTGRLS HHHHHEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LTRSARGLMEKVAVVLRANARRGHWPEGQSAGLAPGDPLPVRMAAGWRRFDGPILLVLSG HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEECCCCEEEEECC DDLTAAEFVDTATRNDSWLGLLDQERVTTRRLEGADHTFSRAVWRNQVAEWTLQWLEASR CCCCHHHHHHHHCCCCCEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHC RDGC CCCC >Mature Secondary Structure ASATRLACAEALEEATVFRIEGEELPGILHRPLQSAERGLLLVVGGPQYRIGSHRQFLL CCHHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCEECCCCHHHHH LARYLAEHGVPVFRFDYRGMGDAGGEQRGYDAVETDIGCAIDEFQRLTPAVREVVVWGLC HHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH DAASAALLYASQDRRISGLVLLNPWVRTEAGIASAYLRHYYWRQLFSGDFWMRLLTGRLS HHHHHEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LTRSARGLMEKVAVVLRANARRGHWPEGQSAGLAPGDPLPVRMAAGWRRFDGPILLVLSG HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEECCCCEEEEECC DDLTAAEFVDTATRNDSWLGLLDQERVTTRRLEGADHTFSRAVWRNQVAEWTLQWLEASR CCCCHHHHHHHHCCCCCEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHC RDGC CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA