| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is 121998350
Identifier: 121998350
GI number: 121998350
Start: 1711511
End: 1712359
Strand: Reverse
Name: 121998350
Synonym: Hhal_1571
Alternate gene names: NA
Gene position: 1712359-1711511 (Counterclockwise)
Preceding gene: 121998351
Following gene: 121998349
Centisome position: 63.93
GC content: 62.07
Gene sequence:
>849_bases ATGGGAAGATCAACGAACTCTAGTGCGGCAATGCACCCTAGGTTTCGGGCGGGTCGCCAGGGCTCCCTCTTCGAGGTTTT GTTTCTGCCTCAAGATCGCCAGCCTCGCGGGGTTGTTCTCCACACTCCGCCGTTCGCGGAAGAGCTGAACAAATCGCGGC GCATGATCGCGCAACAAGCCCGCGCCCTGGCTCGCGAGGGGTGGGCGGTGCTTGTGCCTGATTGTTACGGCTGCGGTGAT AGCGGCGGTGACTTCGCCGACGGTCGTTGGGAACTATGGGTCGACGACTTGGCCGACGGCCTTTCTGAGGTCATGGACTG CTACCCAGGGCCGGTAACCTTATGGGGCTTGCGCGCGGGATGTCTGCTGGCGGTTGACTTGGCCGAACGGCTGCCTTTTT CGCTGCGGGGCGTCATACTCTGGCAGCCGGTGGTCAATGGTCAGCACTTTTTGACTCAATTCTTACGCCTGAGGATGGCT TCTGGCATGCTCAACGGCGAGGCGGCCGAGACTACGCGAGCGTTGCGAGAGCGGTTGGAACAGGGCGAGCCCCTGGAGAT TGCCGGCTACACTCTGCACCCGCAGTTAGCTGCAGCCCTTAATCGTGCGCGCCTTCAGCCGCCGGCTGATTCAGTTCTGT GGTTGGAGGTGTCCGGCTCTAGTGAGGAGGAGGGAAGCGGGGCTTCGCTCTCTCCGGCTAGCCAGCGGATCGTTCAGGGC TGGCGCAGTCAAGAAGTGCGGGTGGAGGCACAAGCCCTCCCCGGGGAGCCGTTTTGGGCAACCCAGGAGATTGGTACGGC ACCTGCCTTGATTGAGGAAACCACGCGATGGCAAGTGCAACACGGCTAG
Upstream 100 bases:
>100_bases GTGCTTACGGCCTGCGAGGAGCGCTTTGGTTTCATCATTGAGGATGACGAGGTCAGTGGTGAGACCTTCGCCACTTTAGG TAGCTTGGCAGACTTTGTTG
Downstream 100 bases:
>100_bases CCTGTGCTGAGGCACTGGAGGAGGCGACCGTCTTCCGCATTGAAGGGGAAGAGTTGCCCGGCATCCTCCACCGCCCGTTG CAAAGCGCTGAGCGTGGTCT
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: Glycosyl Transferase Family Protein; Esterase/Lipase/Thioesterase
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MGRSTNSSAAMHPRFRAGRQGSLFEVLFLPQDRQPRGVVLHTPPFAEELNKSRRMIAQQARALAREGWAVLVPDCYGCGD SGGDFADGRWELWVDDLADGLSEVMDCYPGPVTLWGLRAGCLLAVDLAERLPFSLRGVILWQPVVNGQHFLTQFLRLRMA SGMLNGEAAETTRALRERLEQGEPLEIAGYTLHPQLAAALNRARLQPPADSVLWLEVSGSSEEEGSGASLSPASQRIVQG WRSQEVRVEAQALPGEPFWATQEIGTAPALIEETTRWQVQHG
Sequences:
>Translated_282_residues MGRSTNSSAAMHPRFRAGRQGSLFEVLFLPQDRQPRGVVLHTPPFAEELNKSRRMIAQQARALAREGWAVLVPDCYGCGD SGGDFADGRWELWVDDLADGLSEVMDCYPGPVTLWGLRAGCLLAVDLAERLPFSLRGVILWQPVVNGQHFLTQFLRLRMA SGMLNGEAAETTRALRERLEQGEPLEIAGYTLHPQLAAALNRARLQPPADSVLWLEVSGSSEEEGSGASLSPASQRIVQG WRSQEVRVEAQALPGEPFWATQEIGTAPALIEETTRWQVQHG >Mature_281_residues GRSTNSSAAMHPRFRAGRQGSLFEVLFLPQDRQPRGVVLHTPPFAEELNKSRRMIAQQARALAREGWAVLVPDCYGCGDS GGDFADGRWELWVDDLADGLSEVMDCYPGPVTLWGLRAGCLLAVDLAERLPFSLRGVILWQPVVNGQHFLTQFLRLRMAS GMLNGEAAETTRALRERLEQGEPLEIAGYTLHPQLAAALNRARLQPPADSVLWLEVSGSSEEEGSGASLSPASQRIVQGW RSQEVRVEAQALPGEPFWATQEIGTAPALIEETTRWQVQHG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31021; Mature: 30890
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRSTNSSAAMHPRFRAGRQGSLFEVLFLPQDRQPRGVVLHTPPFAEELNKSRRMIAQQA CCCCCCCCCCCCCHHHCCCCCCEEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHHH RALAREGWAVLVPDCYGCGDSGGDFADGRWELWVDDLADGLSEVMDCYPGPVTLWGLRAG HHHHHCCCEEECCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCEEEEHHCCC CLLAVDLAERLPFSLRGVILWQPVVNGQHFLTQFLRLRMASGMLNGEAAETTRALRERLE HHHEEEHHHHCCHHHCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH QGEPLEIAGYTLHPQLAAALNRARLQPPADSVLWLEVSGSSEEEGSGASLSPASQRIVQG CCCCEEEECEEECHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHC WRSQEVRVEAQALPGEPFWATQEIGTAPALIEETTRWQVQHG CCCCCEEEEEECCCCCCCCCHHHCCCCHHHHHHHHCEEECCC >Mature Secondary Structure GRSTNSSAAMHPRFRAGRQGSLFEVLFLPQDRQPRGVVLHTPPFAEELNKSRRMIAQQA CCCCCCCCCCCCHHHCCCCCCEEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHHH RALAREGWAVLVPDCYGCGDSGGDFADGRWELWVDDLADGLSEVMDCYPGPVTLWGLRAG HHHHHCCCEEECCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCEEEEHHCCC CLLAVDLAERLPFSLRGVILWQPVVNGQHFLTQFLRLRMASGMLNGEAAETTRALRERLE HHHEEEHHHHCCHHHCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH QGEPLEIAGYTLHPQLAAALNRARLQPPADSVLWLEVSGSSEEEGSGASLSPASQRIVQG CCCCEEEECEEECHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHC WRSQEVRVEAQALPGEPFWATQEIGTAPALIEETTRWQVQHG CCCCCEEEEEECCCCCCCCCHHHCCCCHHHHHHHHCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA