| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is 121998335
Identifier: 121998335
GI number: 121998335
Start: 1691439
End: 1692575
Strand: Reverse
Name: 121998335
Synonym: Hhal_1556
Alternate gene names: NA
Gene position: 1692575-1691439 (Counterclockwise)
Preceding gene: 121998339
Following gene: 121998334
Centisome position: 63.19
GC content: 64.91
Gene sequence:
>1137_bases ATGGAGCCCTCGGTTCAGCGACAGCCTTTCGCGCAAGTGGCCTCTGCCTGGGATCGCCTGGCGCAAGATGCTCTCCCGAA TCCGTTCCTGACGACGGCCTGGCACCGAACCCTCCACAAATTAGCTCCAGACGACCCGGTCCCCCCGGCCCTGGAAACCG TCCTGTACCAGTGGGGCGGCGAGCCGAGAGCCTTGGCCACGCTCGGCAGGGCCAGGGTTCGTCGGGCCCTTGTTTTCAGC AGTCGGATGCTCTTTCTCAACGAGACGGGCGATCCGCGCCTTGACTACTTGACGGTCGAGCACAACGCGCCGCTGGCCCC GGTGGGGGCCGAGGCGAAGGCGTTCGCCGGCATGGTCGAGGGTCTGCTCACGGACACAGACTGGGACGAACTCTGCCTGG GGTGGGTCGAGGCGGATCGTTGGCGGGCGTGCTGGTTGGAGTGTTCCCACTTGCCGCTGATGCCGGTGGTGATAGATCGT CGACCCTACTATTTTCGCGGGTTGCAGTCTCGGGATGCCAGGCCGGATCAACTCCTCAGCAGTCTCAGCAGCAACACGCG GCAACAGATTCGGCGGTCGATCCGGCAGTACGGTGGGCTCGACGCCCTCGCCTTTGAGGTCGCCACGGACCCGGCCATGG CCGTGCGGTGGTTCGAGCATATGGTCGAGCTGCATCAAGCGCGCTGGCAGGCGCAGGGCAAGGTCGGCGCTTTCGCCGAT CCGTTCATGCGTGCATTCCATGAGCACCTAATCGAGGCGGGCGCCCAGGATGGTAGCGCTCGCATGATCCGGGTGCAGAC CTCGGAGCGGGTGATTGGCTATCTCTACAACCTGCGGGCGGGGGGCTATGAGTGCAATTACCAGAGTGGCCTCGCTTATG AGGCAGATCCCCGCAGCAAGCCGGGGCTCGTGAGCCATATCCTCGCCATGGCGGCCGCGGCGGAGACCGGGGTCCACTGC TACGATTTCCTCGTTGGTGAGAGCCAGTACAAGCGCAGCCTGGCTAGCGGGAAGGGAGAGATGCTGCGGGTCTCCCTGCA GAGGCGGCGACCGATGCTGTGGTTGGAGCGGCAACTTCGCGCAGCCCGGGATCGGATCCTGCAAAAGAGGGGGCGCGAAC GAAAGGAGGCGTGGTAA
Upstream 100 bases:
>100_bases TAGCAGAGGGATTAAGGAATGCCCGGTTGCAGGAGGAACCATTCGGGATCGGGCATTCGGTAGCGCTATTACGCCTAAGG TAAGCGCCTGGTGAGGTGGC
Downstream 100 bases:
>100_bases TGGATTTCGCGGGACGGACTTCGTTGTGGGCCTGGGGGCCCTTGGCCGTGGTGTTGGGTCTGGCAGCAGGGTTGCCTGCG CTGCTACCGCCGGATCGCTG
Product: cellulose biosynthesis protein CelD
Products: NA
Alternate protein names: Group 1 Glycosyl Transferase; CelD-Like Protein; Protein Involved In Cellulose Biosynthesis-Like Protein
Number of amino acids: Translated: 378; Mature: 378
Protein sequence:
>378_residues MEPSVQRQPFAQVASAWDRLAQDALPNPFLTTAWHRTLHKLAPDDPVPPALETVLYQWGGEPRALATLGRARVRRALVFS SRMLFLNETGDPRLDYLTVEHNAPLAPVGAEAKAFAGMVEGLLTDTDWDELCLGWVEADRWRACWLECSHLPLMPVVIDR RPYYFRGLQSRDARPDQLLSSLSSNTRQQIRRSIRQYGGLDALAFEVATDPAMAVRWFEHMVELHQARWQAQGKVGAFAD PFMRAFHEHLIEAGAQDGSARMIRVQTSERVIGYLYNLRAGGYECNYQSGLAYEADPRSKPGLVSHILAMAAAAETGVHC YDFLVGESQYKRSLASGKGEMLRVSLQRRRPMLWLERQLRAARDRILQKRGRERKEAW
Sequences:
>Translated_378_residues MEPSVQRQPFAQVASAWDRLAQDALPNPFLTTAWHRTLHKLAPDDPVPPALETVLYQWGGEPRALATLGRARVRRALVFS SRMLFLNETGDPRLDYLTVEHNAPLAPVGAEAKAFAGMVEGLLTDTDWDELCLGWVEADRWRACWLECSHLPLMPVVIDR RPYYFRGLQSRDARPDQLLSSLSSNTRQQIRRSIRQYGGLDALAFEVATDPAMAVRWFEHMVELHQARWQAQGKVGAFAD PFMRAFHEHLIEAGAQDGSARMIRVQTSERVIGYLYNLRAGGYECNYQSGLAYEADPRSKPGLVSHILAMAAAAETGVHC YDFLVGESQYKRSLASGKGEMLRVSLQRRRPMLWLERQLRAARDRILQKRGRERKEAW >Mature_378_residues MEPSVQRQPFAQVASAWDRLAQDALPNPFLTTAWHRTLHKLAPDDPVPPALETVLYQWGGEPRALATLGRARVRRALVFS SRMLFLNETGDPRLDYLTVEHNAPLAPVGAEAKAFAGMVEGLLTDTDWDELCLGWVEADRWRACWLECSHLPLMPVVIDR RPYYFRGLQSRDARPDQLLSSLSSNTRQQIRRSIRQYGGLDALAFEVATDPAMAVRWFEHMVELHQARWQAQGKVGAFAD PFMRAFHEHLIEAGAQDGSARMIRVQTSERVIGYLYNLRAGGYECNYQSGLAYEADPRSKPGLVSHILAMAAAAETGVHC YDFLVGESQYKRSLASGKGEMLRVSLQRRRPMLWLERQLRAARDRILQKRGRERKEAW
Specific function: Unknown
COG id: COG5653
COG function: function code M; Protein involved in cellulose biosynthesis (CelD)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42942; Mature: 42942
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPSVQRQPFAQVASAWDRLAQDALPNPFLTTAWHRTLHKLAPDDPVPPALETVLYQWGG CCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCC EPRALATLGRARVRRALVFSSRMLFLNETGDPRLDYLTVEHNAPLAPVGAEAKAFAGMVE CCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHH GLLTDTDWDELCLGWVEADRWRACWLECSHLPLMPVVIDRRPYYFRGLQSRDARPDQLLS HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHCCCCCCCCCHHHHHH SLSSNTRQQIRRSIRQYGGLDALAFEVATDPAMAVRWFEHMVELHQARWQAQGKVGAFAD HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH PFMRAFHEHLIEAGAQDGSARMIRVQTSERVIGYLYNLRAGGYECNYQSGLAYEADPRSK HHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCC PGLVSHILAMAAAAETGVHCYDFLVGESQYKRSLASGKGEMLRVSLQRRRPMLWLERQLR CHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHCCCCCEEEEEHHHCCCHHHHHHHHH AARDRILQKRGRERKEAW HHHHHHHHHHCCCCCCCC >Mature Secondary Structure MEPSVQRQPFAQVASAWDRLAQDALPNPFLTTAWHRTLHKLAPDDPVPPALETVLYQWGG CCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCC EPRALATLGRARVRRALVFSSRMLFLNETGDPRLDYLTVEHNAPLAPVGAEAKAFAGMVE CCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHH GLLTDTDWDELCLGWVEADRWRACWLECSHLPLMPVVIDRRPYYFRGLQSRDARPDQLLS HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHCCCCCCCCCHHHHHH SLSSNTRQQIRRSIRQYGGLDALAFEVATDPAMAVRWFEHMVELHQARWQAQGKVGAFAD HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH PFMRAFHEHLIEAGAQDGSARMIRVQTSERVIGYLYNLRAGGYECNYQSGLAYEADPRSK HHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCC PGLVSHILAMAAAAETGVHCYDFLVGESQYKRSLASGKGEMLRVSLQRRRPMLWLERQLR CHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHCCCCCEEEEEHHHCCCHHHHHHHHH AARDRILQKRGRERKEAW HHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA