| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is 121998322
Identifier: 121998322
GI number: 121998322
Start: 1675025
End: 1675939
Strand: Reverse
Name: 121998322
Synonym: Hhal_1540
Alternate gene names: NA
Gene position: 1675939-1675025 (Counterclockwise)
Preceding gene: 121998323
Following gene: 121998321
Centisome position: 62.57
GC content: 65.57
Gene sequence:
>915_bases GTGACGACGATCGCTGGGCTGGGCTACAGCAGCGTCGTGGATCGTCTATCCAGCGGGGAGCTTGCCGTTCAGACCGGTCC CTTCCGCTTTGCCCTCCGCAGCCGTTTAGCCTCTGTGGCGCAAGGGATCTGGCAGCTCTACGCCGATCACCCGGTTCTTG AGTCAGAGCACGGCTGTGATTTTCACTGTGAGGTCGTGTCCGGCCGCGGGGTGCGCCGCTACTACAGGCCCCAGGCGCTC TTCTACGCGGACGCTAAACGCATTTTCAAGCCGCTCCCCCGCAATCAGGCGTTCCCGATGCTTGAGTGGGGCCTGAACTG GTGCGTGGGGATGCAGACCAAGCATTTCCTGCTCTTTCACGCGGCCTGCCTGGAAAAGAATGGCCGCGCGGTGATCTTGC CGGCGCCGCCGGAAGCGGGGAAGAGCACCCTGTGTGCCGCGCTGGCCAACCGCGGTTGGCGGTTGCTGAGCGACGAGGTG GCCGCAGTCGAGCTGGCCGGCCCTCAGCCGCTGCTCTACGGGTTGGCAAGGCCGGTTAGTCTGAAGAACGCCTCCATCGA GGTGATCCAGCGCTTTGCGCCCGAGGCGGTGATTAGCACGCCGTGCTGCGACACTCGCAAGGGTTCAGTCGCGCATATGC GGCCGCCAGCGGCGAGTGTTGCGCGGGCGAGCGAGCCCACCCCGCCGGGCTGGGTGGTGTTCCCTCGCTACCGTCCCTAC GGGCCCGTGAGCTGGCGAGAGCGCTCCCCGGCGGATACGCTGATGGGGCTGATTGCCCAATCGTTCAACTATGCCGCCCT CGGAAGGCGTGCCTTCCACAGAACGGTGGACCTTGTGGAGCAGGCACCGGGCTATGACTTCGGTTACAGCCGGCTGGAGG AGGCCGTCGAGAGCTTTGACGCGCTGGCCGCTTAA
Upstream 100 bases:
>100_bases GTGGGCTCGTGGAGGCGGGCACGCAGCCAGGTTCTCGGGAGGATCTTCTGGGCTGGGCCCTGCAGCCGCTCATGGATGCG CGTCTAATCCGGGAGTGCAC
Downstream 100 bases:
>100_bases TCCTGCTCACGCGCTCGGACAAGGCCTGGCCTGGCCTGAGACCCTGGCCGGCTTTCCGGAGTCGCTGTGGACGGGGATCC TGGCCGTGGGGCGTGAGAAC
Product: HPr kinase
Products: NA
Alternate protein names: Hpr(Ser) Kinase/Phosphatase
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MTTIAGLGYSSVVDRLSSGELAVQTGPFRFALRSRLASVAQGIWQLYADHPVLESEHGCDFHCEVVSGRGVRRYYRPQAL FYADAKRIFKPLPRNQAFPMLEWGLNWCVGMQTKHFLLFHAACLEKNGRAVILPAPPEAGKSTLCAALANRGWRLLSDEV AAVELAGPQPLLYGLARPVSLKNASIEVIQRFAPEAVISTPCCDTRKGSVAHMRPPAASVARASEPTPPGWVVFPRYRPY GPVSWRERSPADTLMGLIAQSFNYAALGRRAFHRTVDLVEQAPGYDFGYSRLEEAVESFDALAA
Sequences:
>Translated_304_residues MTTIAGLGYSSVVDRLSSGELAVQTGPFRFALRSRLASVAQGIWQLYADHPVLESEHGCDFHCEVVSGRGVRRYYRPQAL FYADAKRIFKPLPRNQAFPMLEWGLNWCVGMQTKHFLLFHAACLEKNGRAVILPAPPEAGKSTLCAALANRGWRLLSDEV AAVELAGPQPLLYGLARPVSLKNASIEVIQRFAPEAVISTPCCDTRKGSVAHMRPPAASVARASEPTPPGWVVFPRYRPY GPVSWRERSPADTLMGLIAQSFNYAALGRRAFHRTVDLVEQAPGYDFGYSRLEEAVESFDALAA >Mature_303_residues TTIAGLGYSSVVDRLSSGELAVQTGPFRFALRSRLASVAQGIWQLYADHPVLESEHGCDFHCEVVSGRGVRRYYRPQALF YADAKRIFKPLPRNQAFPMLEWGLNWCVGMQTKHFLLFHAACLEKNGRAVILPAPPEAGKSTLCAALANRGWRLLSDEVA AVELAGPQPLLYGLARPVSLKNASIEVIQRFAPEAVISTPCCDTRKGSVAHMRPPAASVARASEPTPPGWVVFPRYRPYG PVSWRERSPADTLMGLIAQSFNYAALGRRAFHRTVDLVEQAPGYDFGYSRLEEAVESFDALAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33448; Mature: 33316
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTIAGLGYSSVVDRLSSGELAVQTGPFRFALRSRLASVAQGIWQLYADHPVLESEHGCD CCEECCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC FHCEVVSGRGVRRYYRPQALFYADAKRIFKPLPRNQAFPMLEWGLNWCVGMQTKHFLLFH EEEEEECCCCHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHCCCCCHHHHHHH AACLEKNGRAVILPAPPEAGKSTLCAALANRGWRLLSDEVAAVELAGPQPLLYGLARPVS HHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEECCCEEEEEECCCCHHHHHHCCCCC LKNASIEVIQRFAPEAVISTPCCDTRKGSVAHMRPPAASVARASEPTPPGWVVFPRYRPY CCCHHHHHHHHHCCHHHHCCCCCCCCCCCEEECCCCHHHHHHCCCCCCCCEEEECCCCCC GPVSWRERSPADTLMGLIAQSFNYAALGRRAFHRTVDLVEQAPGYDFGYSRLEEAVESFD CCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH ALAA HHCC >Mature Secondary Structure TTIAGLGYSSVVDRLSSGELAVQTGPFRFALRSRLASVAQGIWQLYADHPVLESEHGCD CEECCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC FHCEVVSGRGVRRYYRPQALFYADAKRIFKPLPRNQAFPMLEWGLNWCVGMQTKHFLLFH EEEEEECCCCHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHCCCCCHHHHHHH AACLEKNGRAVILPAPPEAGKSTLCAALANRGWRLLSDEVAAVELAGPQPLLYGLARPVS HHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEECCCEEEEEECCCCHHHHHHCCCCC LKNASIEVIQRFAPEAVISTPCCDTRKGSVAHMRPPAASVARASEPTPPGWVVFPRYRPY CCCHHHHHHHHHCCHHHHCCCCCCCCCCCEEECCCCHHHHHHCCCCCCCCEEEECCCCCC GPVSWRERSPADTLMGLIAQSFNYAALGRRAFHRTVDLVEQAPGYDFGYSRLEEAVESFD CCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH ALAA HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA