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The map label for this gene is 121998308

Identifier: 121998308

GI number: 121998308

Start: 1653853

End: 1656123

Strand: Reverse

Name: 121998308

Synonym: Hhal_1526

Alternate gene names: NA

Gene position: 1656123-1653853 (Counterclockwise)

Preceding gene: 121998309

Following gene: 121998303

Centisome position: 61.83

GC content: 62.84

Gene sequence:

>2271_bases
TTGAGGCGTATGACTTTGCCGCGGTGGTTGGCGGCGACCTTGTTTGCGTTGCTGCTGCTGGCGCCAGGCCCGCTCGTGCT
CAACCTGACCTTCGACAATGCGCCGGAGTCGTACTTTCCCAAGGAGGCACCGGCCGTCCTTTTCGACGCTTCGGTGCGCG
AGGAGTTCCCGGAGGAGCAGGTCCTGGTCGGCCTGTTCGGCGGCGAGGAGATCTACGAGCCCGAGAATCTTAGCGCGCTC
CATGAGCTTATCCAACACCTGGAGGAGAACCGGCAGGTCGAGCGAGTGCTGGGTGTAACGTCATTCGATCAGATTCGGGC
CGTCGACGATGGCTTCACGGTCGAGAAGATCGTCCCCCCGGGCGCCATTCCAGAACGGAGCGGGAGTCAGTGGCAGGAGC
ACGTCCGGGCAGATCGTTTTGCACCGGGGTTGCTGGCTGCGCGGGATAGTTCGGCCCTGGCGATCATCGTGCGCCCGACT
GAACTGGAAGACAGTCTGCAGCGGCTGGAGCTTGAGCGGGCCTTCCGCGAGGCGGTGGCCGAGGCCGGCCTGGATGAGCG
GCTACAGGCGGTTGCCGGCCACGTCGCGCTGGATGTCTGGCAACTGCGCTCCATGCTGCGGGATAGCGCCGTCTTTATTC
CGGCCACCACAGCGGTAGGCCTCGGACTGCTGTTCTGGATGTTCCGGCGATGGCTGGTGGTGGTTGCCGGAGGGGCGGCG
ATTGGTGCGGTCGTCTCGCCTGCGCTGGCGCTGATGGTGCTGCTGGGTCATCCGTATACCCTGGTGACGTCCATATTGCC
ACCGTTGCTGGCCGCGCTGACGGTGGCAATGCTGATGCACCTGTTCAACGCGCTGAGCCACGCGCATCGACGCGGCTACA
CCGAGGAAAGCGCGCTGGCCTATAGCTTGGAAAGGGTCTCTAGGCCGGCATTGTTTACCGCTCTGACAACGGCTGCGGGG
CTGTTGTCGCTCACACTGAGTCCGATCCGTCCCATCGAGAGCCTGGGGTATACCGCAGCGTTCGGCGTACTCCTAGCCTA
CTGTGTCGTTATGGTGCTTTTGCCACCATTGCTCGCGCGTTTCGACCGCGGCAATTGGTCGCTGCCGCGCCGCGGGATCG
GTGGCCTCGACGCGATCCTTAAGGCGGCTCGTGGATTCGCGCTGCGTCGGGCGGGCTGGATCGTCGCAGTCAGCGCGTTG
GCGATTGCAGCGACGGCGCCGCTGATCACGAAGATCGAAGTCGAGAGTGATCTCTACGAGTTCTTCCCGGCGGGCCATCC
CATCACCCAAGACACCCGCAAGGTCGAAGACGCGCTCTCCGGTGTGATGGTGGTGGAGGCGGTTTTCGACGCCGAGGCTA
TCGACGGGCTGCAGGATCCGGCTGCCTTGCAGGAGATTCGGGACTTCCAGCGCTGGGCCGAACAGCGGGAGGAGGTGGAC
TACGCCCTATCGATGGTGGATATGCTCGAGGAGATGCACTGGGCGTTCCACGACGAGGATCCGGAGTTCCGGACCCTGCC
CGGTCGGCAAGATCTGATTGCCCAGTACCTGTTCGTATACGACGGGCGAGATCTCTACGACCTGGTCAATCGGGATTTCA
CGCGGGCCATCGTCCTGATGAACCTGAACGTCACCGGCGCTCGCGAAATCGGTCAGACTCTTGAGGCGTTTCGGGGGGAG
CTTGACTCGAGCGTTGAGGTTCTGGATTGGGAGCTCTCCGGGATGGGGCGGCTCTTTGCCGAACAGGAAGAACTGCTCAT
AGAGGGGCAGCTTCGTAGCCTCATTGCCGTGGCCGTGATGATCTCGGTGTTGATGTTGGTCCTCTGGCGCTCGGCGGCGG
CGGCTTCTGTGACCATGCTGACGAATCTATCTCCGTTGCTGGTCATCTTCATTGTCATGGGGGCCTTCGGCGTCTGGCTC
GATATGGCGACGGCCATGGTGGCGAGTGTGGCAATCGGCATCGCGGTGGACGATACCATCCACACCTACCACGGGTTCCT
CTTCTATCGGCGCAGAGGGAGCAGTGTCGTTGCTGCATTGGCCCGGGCGTTGCAGCATACGGGCCGGGCGGTAACGGCGA
CGACTATTGTCCTGTGTGCGCAGTTCCTGGTTCTGGCTGCTTCAGACTTCCAGCCAACCGCGGCCTTTGGTCTGCTTACG
GCCATCGGTCTGGTCGCGGCACTGCTCTTCGACTTGCTCCTCATGCCGGCGATAGTCACGGTGCTTGCGAAGCGCTTTCC
GAGGCTTAGTCTGGGGCGGGTATCCGCTTAG

Upstream 100 bases:

>100_bases
AACTCTACGTGTCGGCGCACTATTTCGAAGGTGCGGAAGAGACGGCCGGCGGGTTCCACCAGGATAACGACGTCATCATG
ACAGGCTGGAGGGGACGGTT

Downstream 100 bases:

>100_bases
AGGGAATCAGGGGCAAAAGAAGGAGGGGCGCAGCGCACCAGCACAATGGATCATTGCCCGAGCAGGCGGCGCCTTGCCAG
CCAAAGGCCCAGGCGTTGGA

Product: RND efflux transporter

Products: NA

Alternate protein names: Patched Family Protein; Exporter Of RND Superfamily Protein-Like Protein; Integral Membrane Protein; Exporter Of RND Superfamily; RND Superfamily Exporter; Exporter Of RND Superfamily Protein; Efflux Transporter Hydrophobe/Amphiphile Efflux-3 Family; Inner Membrane Transporter; Resistance-Nodulation- Family Transporter; Polyketide Cyclase/Dehydrase; Histidine Kinase; Exporter; Sterol-Sensing 5tm Box Domain Protein; MMPL Domain Protein; RND Family Efflux Transporter; Transporter RND Superfamily

Number of amino acids: Translated: 756; Mature: 756

Protein sequence:

>756_residues
MRRMTLPRWLAATLFALLLLAPGPLVLNLTFDNAPESYFPKEAPAVLFDASVREEFPEEQVLVGLFGGEEIYEPENLSAL
HELIQHLEENRQVERVLGVTSFDQIRAVDDGFTVEKIVPPGAIPERSGSQWQEHVRADRFAPGLLAARDSSALAIIVRPT
ELEDSLQRLELERAFREAVAEAGLDERLQAVAGHVALDVWQLRSMLRDSAVFIPATTAVGLGLLFWMFRRWLVVVAGGAA
IGAVVSPALALMVLLGHPYTLVTSILPPLLAALTVAMLMHLFNALSHAHRRGYTEESALAYSLERVSRPALFTALTTAAG
LLSLTLSPIRPIESLGYTAAFGVLLAYCVVMVLLPPLLARFDRGNWSLPRRGIGGLDAILKAARGFALRRAGWIVAVSAL
AIAATAPLITKIEVESDLYEFFPAGHPITQDTRKVEDALSGVMVVEAVFDAEAIDGLQDPAALQEIRDFQRWAEQREEVD
YALSMVDMLEEMHWAFHDEDPEFRTLPGRQDLIAQYLFVYDGRDLYDLVNRDFTRAIVLMNLNVTGAREIGQTLEAFRGE
LDSSVEVLDWELSGMGRLFAEQEELLIEGQLRSLIAVAVMISVLMLVLWRSAAAASVTMLTNLSPLLVIFIVMGAFGVWL
DMATAMVASVAIGIAVDDTIHTYHGFLFYRRRGSSVVAALARALQHTGRAVTATTIVLCAQFLVLAASDFQPTAAFGLLT
AIGLVAALLFDLLLMPAIVTVLAKRFPRLSLGRVSA

Sequences:

>Translated_756_residues
MRRMTLPRWLAATLFALLLLAPGPLVLNLTFDNAPESYFPKEAPAVLFDASVREEFPEEQVLVGLFGGEEIYEPENLSAL
HELIQHLEENRQVERVLGVTSFDQIRAVDDGFTVEKIVPPGAIPERSGSQWQEHVRADRFAPGLLAARDSSALAIIVRPT
ELEDSLQRLELERAFREAVAEAGLDERLQAVAGHVALDVWQLRSMLRDSAVFIPATTAVGLGLLFWMFRRWLVVVAGGAA
IGAVVSPALALMVLLGHPYTLVTSILPPLLAALTVAMLMHLFNALSHAHRRGYTEESALAYSLERVSRPALFTALTTAAG
LLSLTLSPIRPIESLGYTAAFGVLLAYCVVMVLLPPLLARFDRGNWSLPRRGIGGLDAILKAARGFALRRAGWIVAVSAL
AIAATAPLITKIEVESDLYEFFPAGHPITQDTRKVEDALSGVMVVEAVFDAEAIDGLQDPAALQEIRDFQRWAEQREEVD
YALSMVDMLEEMHWAFHDEDPEFRTLPGRQDLIAQYLFVYDGRDLYDLVNRDFTRAIVLMNLNVTGAREIGQTLEAFRGE
LDSSVEVLDWELSGMGRLFAEQEELLIEGQLRSLIAVAVMISVLMLVLWRSAAAASVTMLTNLSPLLVIFIVMGAFGVWL
DMATAMVASVAIGIAVDDTIHTYHGFLFYRRRGSSVVAALARALQHTGRAVTATTIVLCAQFLVLAASDFQPTAAFGLLT
AIGLVAALLFDLLLMPAIVTVLAKRFPRLSLGRVSA
>Mature_756_residues
MRRMTLPRWLAATLFALLLLAPGPLVLNLTFDNAPESYFPKEAPAVLFDASVREEFPEEQVLVGLFGGEEIYEPENLSAL
HELIQHLEENRQVERVLGVTSFDQIRAVDDGFTVEKIVPPGAIPERSGSQWQEHVRADRFAPGLLAARDSSALAIIVRPT
ELEDSLQRLELERAFREAVAEAGLDERLQAVAGHVALDVWQLRSMLRDSAVFIPATTAVGLGLLFWMFRRWLVVVAGGAA
IGAVVSPALALMVLLGHPYTLVTSILPPLLAALTVAMLMHLFNALSHAHRRGYTEESALAYSLERVSRPALFTALTTAAG
LLSLTLSPIRPIESLGYTAAFGVLLAYCVVMVLLPPLLARFDRGNWSLPRRGIGGLDAILKAARGFALRRAGWIVAVSAL
AIAATAPLITKIEVESDLYEFFPAGHPITQDTRKVEDALSGVMVVEAVFDAEAIDGLQDPAALQEIRDFQRWAEQREEVD
YALSMVDMLEEMHWAFHDEDPEFRTLPGRQDLIAQYLFVYDGRDLYDLVNRDFTRAIVLMNLNVTGAREIGQTLEAFRGE
LDSSVEVLDWELSGMGRLFAEQEELLIEGQLRSLIAVAVMISVLMLVLWRSAAAASVTMLTNLSPLLVIFIVMGAFGVWL
DMATAMVASVAIGIAVDDTIHTYHGFLFYRRRGSSVVAALARALQHTGRAVTATTIVLCAQFLVLAASDFQPTAAFGLLT
AIGLVAALLFDLLLMPAIVTVLAKRFPRLSLGRVSA

Specific function: Unknown

COG id: COG1033

COG function: function code R; Predicted exporters of the RND superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 82799; Mature: 82799

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: PS50156 SSD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRMTLPRWLAATLFALLLLAPGPLVLNLTFDNAPESYFPKEAPAVLFDASVREEFPEEQ
CCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCEEEECHHHHHCCCCC
VLVGLFGGEEIYEPENLSALHELIQHLEENRQVERVLGVTSFDQIRAVDDGFTVEKIVPP
EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCEEHHCCCC
GAIPERSGSQWQEHVRADRFAPGLLAARDSSALAIIVRPTELEDSLQRLELERAFREAVA
CCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHH
EAGLDERLQAVAGHVALDVWQLRSMLRDSAVFIPATTAVGLGLLFWMFRRWLVVVAGGAA
HCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCHH
IGAVVSPALALMVLLGHPYTLVTSILPPLLAALTVAMLMHLFNALSHAHRRGYTEESALA
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
YSLERVSRPALFTALTTAAGLLSLTLSPIRPIESLGYTAAFGVLLAYCVVMVLLPPLLAR
HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
FDRGNWSLPRRGIGGLDAILKAARGFALRRAGWIVAVSALAIAATAPLITKIEVESDLYE
HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEHHHHHHH
FFPAGHPITQDTRKVEDALSGVMVVEAVFDAEAIDGLQDPAALQEIRDFQRWAEQREEVD
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
YALSMVDMLEEMHWAFHDEDPEFRTLPGRQDLIAQYLFVYDGRDLYDLVNRDFTRAIVLM
HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCHHHEEEEE
NLNVTGAREIGQTLEAFRGELDSSVEVLDWELSGMGRLFAEQEELLIEGQLRSLIAVAVM
ECCCCCHHHHHHHHHHHHHCCCCCHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISVLMLVLWRSAAAASVTMLTNLSPLLVIFIVMGAFGVWLDMATAMVASVAIGIAVDDTI
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHH
HTYHGFLFYRRRGSSVVAALARALQHTGRAVTATTIVLCAQFLVLAASDFQPTAAFGLLT
HHHHHHHHEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
AIGLVAALLFDLLLMPAIVTVLAKRFPRLSLGRVSA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MRRMTLPRWLAATLFALLLLAPGPLVLNLTFDNAPESYFPKEAPAVLFDASVREEFPEEQ
CCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCEEEECHHHHHCCCCC
VLVGLFGGEEIYEPENLSALHELIQHLEENRQVERVLGVTSFDQIRAVDDGFTVEKIVPP
EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCEEHHCCCC
GAIPERSGSQWQEHVRADRFAPGLLAARDSSALAIIVRPTELEDSLQRLELERAFREAVA
CCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHH
EAGLDERLQAVAGHVALDVWQLRSMLRDSAVFIPATTAVGLGLLFWMFRRWLVVVAGGAA
HCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCHH
IGAVVSPALALMVLLGHPYTLVTSILPPLLAALTVAMLMHLFNALSHAHRRGYTEESALA
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
YSLERVSRPALFTALTTAAGLLSLTLSPIRPIESLGYTAAFGVLLAYCVVMVLLPPLLAR
HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
FDRGNWSLPRRGIGGLDAILKAARGFALRRAGWIVAVSALAIAATAPLITKIEVESDLYE
HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEHHHHHHH
FFPAGHPITQDTRKVEDALSGVMVVEAVFDAEAIDGLQDPAALQEIRDFQRWAEQREEVD
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
YALSMVDMLEEMHWAFHDEDPEFRTLPGRQDLIAQYLFVYDGRDLYDLVNRDFTRAIVLM
HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCHHHEEEEE
NLNVTGAREIGQTLEAFRGELDSSVEVLDWELSGMGRLFAEQEELLIEGQLRSLIAVAVM
ECCCCCHHHHHHHHHHHHHCCCCCHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISVLMLVLWRSAAAASVTMLTNLSPLLVIFIVMGAFGVWLDMATAMVASVAIGIAVDDTI
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHH
HTYHGFLFYRRRGSSVVAALARALQHTGRAVTATTIVLCAQFLVLAASDFQPTAAFGLLT
HHHHHHHHEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
AIGLVAALLFDLLLMPAIVTVLAKRFPRLSLGRVSA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA