Definition Halorhodospira halophila SL1 chromosome, complete genome.
Accession NC_008789
Length 2,678,452

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The map label for this gene is 121998309

Identifier: 121998309

GI number: 121998309

Start: 1656120

End: 1657604

Strand: Reverse

Name: 121998309

Synonym: Hhal_1527

Alternate gene names: NA

Gene position: 1657604-1656120 (Counterclockwise)

Preceding gene: 121998310

Following gene: 121998308

Centisome position: 61.89

GC content: 66.26

Gene sequence:

>1485_bases
GTGGTGCTAGGGCTCGGGTCGGCGTCCATCGGGGTTAATGGGGTGGCCTTGGCCTCAATAGGTGATCGTGGCGATGCGGC
CGGTGACTCGGTGGAGCCGGTCCGGGGGGAGTTTGAGGCTTTGGAGCCGTCGCGGCGGCTCGCGGAAAACGGGGCCGAGG
GCGACGGCGGTATACGCATCGGCGATCCGTCGCCGGAGGCCGTCGACGAGGACAAGCCACAACCGGAGGCATGGCTCCCG
GAGGACTGGGCGTTCGGAGTCGAAAGTGTGCGTCTGGACGCGGGTTGGCTGCCGCGCAGTGCCTCTTACGCCGACCTGGT
CTACCACGGGCACCTGCTAGGACGTGCGGACTGGCAACCCCGGGGCCCCTGGAGCGCTCGCGTGGAGAGCCGCGTGGACG
GTCATTACCAGCGCGGGGGCCCACGTGTCGAGGAGATCGATGTCGACTACGGGGAGGTGTACCTCCGCTACCGGGGTCGC
GGATGGCGTCTGACCGCTGGTGCGCAACAGGTGGTCTGGGGCCGGATCGATGAGGTCTCGCCGACCGACCGACTGAGCGT
CGAGGACCTGTCACGCTTTGTCCTGGACGACCTCAGTGAGCGGCGTCGCGCCGCTCCCGCGGTTCGTGGGCAGCTCTTCA
CCAACGGTTGGGAGTTCGACGCCGTGGTGGTGCCGTGGTTCCGGGAGGCGGAAATGCCGGATCGCGATAGCGTCTGGCAT
CCGGTTGATCGCCAGCGTGGGCGTTTTCTGGGCCTGCCGTCGGAGCCCCAATTCCAGGATCTGGTGCGAGACGGGCGGTT
TGTCGAAGAGACCGACGGCGAGGGCGGCGCCGGGCTTCGGGTCAGCCGAGGCGGACGTGGCTGGGACGCTGCTGCGACGT
TCAAGCGTTTCCGGCATTCCGCGCCGTACTACGAGTTGAGCGATGAGGCACGCGGAGCCCTCGATGATCCGGAGGAGGCC
GTGCAGGCCGGCGATTACACCTTTCGTGCGGTCCATCCGCGCAGTTATCTGGTCGGCGTGGACGGTGCAATCGACGCTGG
CGGAGTCACCTACCGCGCCGAAGCGGTATGGCTCAGCGACGTGCCGGGGACCCGGCAGGAAGATTTCGTGCGCGAGGATT
TCGAGGCCTTCAATTGGGGTGTGGGGGCCGAGGTGTTTCCAGGGGACGGGGATTTGCGAGTGAACGTGCAGCTGGTTGGC
AGCCACTACCTTGATGCGCCGTCCCTACTGGAACGTGCCGATGAAGTCACCCTCAATGGCGAGATCGAGGGGCGGCCCTG
GCAGCGGCGTCTCCGGGCGAGGCTTCGTTATGCGATCGGGCTCGATGAGCGGGACATCTACCTGAATCCGGAGGTGGCCT
GGGTGGACTGGGAACCCCATGAACTCTACGTGTCGGCGCACTATTTCGAAGGTGCGGAAGAGACGGCCGGCGGGTTCCAC
CAGGATAACGACGTCATCATGACAGGCTGGAGGGGACGGTTTTGA

Upstream 100 bases:

>100_bases
TTGCCGCAAGATCTCTTCTCCCGCGCGGCGTTGTCGGATCCGGGGGGCGAACGTGCCTACCGCCCTTGACCGGCCCATTC
CGCGGTGTCGGACGCTGCTG

Downstream 100 bases:

>100_bases
GGCGTATGACTTTGCCGCGGTGGTTGGCGGCGACCTTGTTTGCGTTGCTGCTGCTGGCGCCAGGCCCGCTCGTGCTCAAC
CTGACCTTCGACAATGCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 494; Mature: 494

Protein sequence:

>494_residues
MVLGLGSASIGVNGVALASIGDRGDAAGDSVEPVRGEFEALEPSRRLAENGAEGDGGIRIGDPSPEAVDEDKPQPEAWLP
EDWAFGVESVRLDAGWLPRSASYADLVYHGHLLGRADWQPRGPWSARVESRVDGHYQRGGPRVEEIDVDYGEVYLRYRGR
GWRLTAGAQQVVWGRIDEVSPTDRLSVEDLSRFVLDDLSERRRAAPAVRGQLFTNGWEFDAVVVPWFREAEMPDRDSVWH
PVDRQRGRFLGLPSEPQFQDLVRDGRFVEETDGEGGAGLRVSRGGRGWDAAATFKRFRHSAPYYELSDEARGALDDPEEA
VQAGDYTFRAVHPRSYLVGVDGAIDAGGVTYRAEAVWLSDVPGTRQEDFVREDFEAFNWGVGAEVFPGDGDLRVNVQLVG
SHYLDAPSLLERADEVTLNGEIEGRPWQRRLRARLRYAIGLDERDIYLNPEVAWVDWEPHELYVSAHYFEGAEETAGGFH
QDNDVIMTGWRGRF

Sequences:

>Translated_494_residues
MVLGLGSASIGVNGVALASIGDRGDAAGDSVEPVRGEFEALEPSRRLAENGAEGDGGIRIGDPSPEAVDEDKPQPEAWLP
EDWAFGVESVRLDAGWLPRSASYADLVYHGHLLGRADWQPRGPWSARVESRVDGHYQRGGPRVEEIDVDYGEVYLRYRGR
GWRLTAGAQQVVWGRIDEVSPTDRLSVEDLSRFVLDDLSERRRAAPAVRGQLFTNGWEFDAVVVPWFREAEMPDRDSVWH
PVDRQRGRFLGLPSEPQFQDLVRDGRFVEETDGEGGAGLRVSRGGRGWDAAATFKRFRHSAPYYELSDEARGALDDPEEA
VQAGDYTFRAVHPRSYLVGVDGAIDAGGVTYRAEAVWLSDVPGTRQEDFVREDFEAFNWGVGAEVFPGDGDLRVNVQLVG
SHYLDAPSLLERADEVTLNGEIEGRPWQRRLRARLRYAIGLDERDIYLNPEVAWVDWEPHELYVSAHYFEGAEETAGGFH
QDNDVIMTGWRGRF
>Mature_494_residues
MVLGLGSASIGVNGVALASIGDRGDAAGDSVEPVRGEFEALEPSRRLAENGAEGDGGIRIGDPSPEAVDEDKPQPEAWLP
EDWAFGVESVRLDAGWLPRSASYADLVYHGHLLGRADWQPRGPWSARVESRVDGHYQRGGPRVEEIDVDYGEVYLRYRGR
GWRLTAGAQQVVWGRIDEVSPTDRLSVEDLSRFVLDDLSERRRAAPAVRGQLFTNGWEFDAVVVPWFREAEMPDRDSVWH
PVDRQRGRFLGLPSEPQFQDLVRDGRFVEETDGEGGAGLRVSRGGRGWDAAATFKRFRHSAPYYELSDEARGALDDPEEA
VQAGDYTFRAVHPRSYLVGVDGAIDAGGVTYRAEAVWLSDVPGTRQEDFVREDFEAFNWGVGAEVFPGDGDLRVNVQLVG
SHYLDAPSLLERADEVTLNGEIEGRPWQRRLRARLRYAIGLDERDIYLNPEVAWVDWEPHELYVSAHYFEGAEETAGGFH
QDNDVIMTGWRGRF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55139; Mature: 55139

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLGLGSASIGVNGVALASIGDRGDAAGDSVEPVRGEFEALEPSRRLAENGAEGDGGIRI
CEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHCCHHHHHHHCCCCCCCCEEC
GDPSPEAVDEDKPQPEAWLPEDWAFGVESVRLDAGWLPRSASYADLVYHGHLLGRADWQP
CCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEECCCCCCCCCCCHHEEEECEEEECCCCCC
RGPWSARVESRVDGHYQRGGPRVEEIDVDYGEVYLRYRGRGWRLTAGAQQVVWGRIDEVS
CCCHHHHHHHHCCCCHHCCCCCEEEEECCCCEEEEEECCCCEEEECCCHHHHCCCCCCCC
PTDRLSVEDLSRFVLDDLSERRRAAPAVRGQLFTNGWEFDAVVVPWFREAEMPDRDSVWH
CCCCCCHHHHHHHHHHHHHHHHHCCHHHHCEEECCCEEEEEEEECCCCCCCCCCCCCCCC
PVDRQRGRFLGLPSEPQFQDLVRDGRFVEETDGEGGAGLRVSRGGRGWDAAATFKRFRHS
CCHHCCCCEECCCCCCHHHHHHHCCCEEEECCCCCCCCEEECCCCCCCCHHHHHHHHHCC
APYYELSDEARGALDDPEEAVQAGDYTFRAVHPRSYLVGVDGAIDAGGVTYRAEAVWLSD
CCCEEECHHCCCCCCCHHHHHHCCCEEEEEECCCEEEEECCCCCCCCCEEEEEEEEEEEC
VPGTRQEDFVREDFEAFNWGVGAEVFPGDGDLRVNVQLVGSHYLDAPSLLERADEVTLNG
CCCCCHHHHHHHHHHHHCCCCCCEEECCCCCEEEEEEEECCCCCCCHHHHHHCCCEEECC
EIEGRPWQRRLRARLRYAIGLDERDIYLNPEVAWVDWEPHELYVSAHYFEGAEETAGGFH
EECCCHHHHHHHHHHHHHCCCCCCCEEECCEEEEEECCCCEEEEEEEEECCCHHHCCCCC
QDNDVIMTGWRGRF
CCCCEEEECCCCCC
>Mature Secondary Structure
MVLGLGSASIGVNGVALASIGDRGDAAGDSVEPVRGEFEALEPSRRLAENGAEGDGGIRI
CEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHCCHHHHHHHCCCCCCCCEEC
GDPSPEAVDEDKPQPEAWLPEDWAFGVESVRLDAGWLPRSASYADLVYHGHLLGRADWQP
CCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEECCCCCCCCCCCHHEEEECEEEECCCCCC
RGPWSARVESRVDGHYQRGGPRVEEIDVDYGEVYLRYRGRGWRLTAGAQQVVWGRIDEVS
CCCHHHHHHHHCCCCHHCCCCCEEEEECCCCEEEEEECCCCEEEECCCHHHHCCCCCCCC
PTDRLSVEDLSRFVLDDLSERRRAAPAVRGQLFTNGWEFDAVVVPWFREAEMPDRDSVWH
CCCCCCHHHHHHHHHHHHHHHHHCCHHHHCEEECCCEEEEEEEECCCCCCCCCCCCCCCC
PVDRQRGRFLGLPSEPQFQDLVRDGRFVEETDGEGGAGLRVSRGGRGWDAAATFKRFRHS
CCHHCCCCEECCCCCCHHHHHHHCCCEEEECCCCCCCCEEECCCCCCCCHHHHHHHHHCC
APYYELSDEARGALDDPEEAVQAGDYTFRAVHPRSYLVGVDGAIDAGGVTYRAEAVWLSD
CCCEEECHHCCCCCCCHHHHHHCCCEEEEEECCCEEEEECCCCCCCCCEEEEEEEEEEEC
VPGTRQEDFVREDFEAFNWGVGAEVFPGDGDLRVNVQLVGSHYLDAPSLLERADEVTLNG
CCCCCHHHHHHHHHHHHCCCCCCEEECCCCCEEEEEEEECCCCCCCHHHHHHCCCEEECC
EIEGRPWQRRLRARLRYAIGLDERDIYLNPEVAWVDWEPHELYVSAHYFEGAEETAGGFH
EECCCHHHHHHHHHHHHHCCCCCCCEEECCEEEEEECCCCEEEEEEEEECCCHHHCCCCC
QDNDVIMTGWRGRF
CCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA