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The map label for this gene is 121998299

Identifier: 121998299

GI number: 121998299

Start: 1644116

End: 1645021

Strand: Reverse

Name: 121998299

Synonym: Hhal_1517

Alternate gene names: NA

Gene position: 1645021-1644116 (Counterclockwise)

Preceding gene: 121998300

Following gene: 121998298

Centisome position: 61.42

GC content: 66.0

Gene sequence:

>906_bases
ATGGAGGAGCGCAGCTGGGCGCGGTGCAATGCGCTGACAGTGGATGTCGAGGATTACTTTCAAGTCCTGGCCATGGCGCC
GTATGTGGGGCGGGACGCATGGGAGCGCTGGCCTTGTCGCATCGAGGCAAGCATGGATCGGCTTCTGCAGATCTGTGCCG
ACCGCTGTGTTTGCGGCACGTTCTTTACCCTCGGCTGGGTGGCGAAGCGCTATCCGCAGGTTGTCCGCCGCATCGTGGCT
GCCGGTCACGAGTTGGCGAGCCACGGATACGGGCATGAGCGCGTCTGGGAGATCGGGCCGCGCGCATTCCGCGAGGATTT
GATCCGGGCTAAGGGGCTGTTGGAAGACACCGGCGGGGTGCCGGTGGTCGGTTATCGGGCGCCGGCCTTTTCCATCGGGC
CGCGAACGCCCTGGGCGCGAGAGATCCTGCAGGAGACCGGTCACCGCTACAGCTCAAGCGTCTACCCGGTCCGGCATGAC
CACTACGGCACCCCTGAGGCACCACGACACGCCCATCGTCCGGATGGGCAAGGCGGCCTCCTAGAGTTGCCCCCGGCGAC
GCTTCGGCTCCTTGGTCGGAATCTTCCGGCGGGTGGCGGCGGCTATTTTCGACTTCTGCCCTACCGGGTCTCGTGGGCAG
CTCTGCGCTGGATCGCCCAAGCGGAGGGGCAGCCGGCGGTGTTCTATATTCACCCCTGGGAGCTCGATCCCGAGCAGCCG
CGGGTCCCGGGCATCGATCTCCGCACCCGCGTTCGTCACTACGTGAACCTGCATCGCACGGAGCAGCGGCTCAGTCGGTT
GCTCCAGGATCTGGACTGGGATCGGATCGATCGCGTCTTTGCGCCGGAGTTGGCCGGTGTCAGCGACTGGCAGGCCGGGC
AGGCGGTTTCAGCCCAGGCATTCTGA

Upstream 100 bases:

>100_bases
TGAGTGGCTCGCTCAAGCGGGCACTGGAGGTAAACCGCGGGGAACCGTGACTGCCGCGTGGGGATGACGGGGGCGGAAAG
GCCCCAAAGGGGGATGGGCC

Downstream 100 bases:

>100_bases
AAGTTAGCCGCTTTGGAGCGCCAGCAGACAGGGAGAAGCGGTACAGGAATGGATCTACGCGTAGCGAGACTGGAAGCGGC
GGACGAGGCCCGCTGGGACG

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: Polysaccharide Deacetylase Family Protein; Xylanase/Chitin Deacetylase; Polysaccharide Deacetylase Domain-Containing Protein; Polysaccharide Deacetylase Domain Protein; PEP-CTERM Locus Polysaccharide Deactylase; Polysaccharide Deactylase Domain-Containing Protein; Polysaccharide Deacetylase N-Terminal Fragment; Saccharide Deacetylase Slightly; Polysaccharide Deacetylase Pda4C; Chitooligosaccharide Deacetylase

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MEERSWARCNALTVDVEDYFQVLAMAPYVGRDAWERWPCRIEASMDRLLQICADRCVCGTFFTLGWVAKRYPQVVRRIVA
AGHELASHGYGHERVWEIGPRAFREDLIRAKGLLEDTGGVPVVGYRAPAFSIGPRTPWAREILQETGHRYSSSVYPVRHD
HYGTPEAPRHAHRPDGQGGLLELPPATLRLLGRNLPAGGGGYFRLLPYRVSWAALRWIAQAEGQPAVFYIHPWELDPEQP
RVPGIDLRTRVRHYVNLHRTEQRLSRLLQDLDWDRIDRVFAPELAGVSDWQAGQAVSAQAF

Sequences:

>Translated_301_residues
MEERSWARCNALTVDVEDYFQVLAMAPYVGRDAWERWPCRIEASMDRLLQICADRCVCGTFFTLGWVAKRYPQVVRRIVA
AGHELASHGYGHERVWEIGPRAFREDLIRAKGLLEDTGGVPVVGYRAPAFSIGPRTPWAREILQETGHRYSSSVYPVRHD
HYGTPEAPRHAHRPDGQGGLLELPPATLRLLGRNLPAGGGGYFRLLPYRVSWAALRWIAQAEGQPAVFYIHPWELDPEQP
RVPGIDLRTRVRHYVNLHRTEQRLSRLLQDLDWDRIDRVFAPELAGVSDWQAGQAVSAQAF
>Mature_301_residues
MEERSWARCNALTVDVEDYFQVLAMAPYVGRDAWERWPCRIEASMDRLLQICADRCVCGTFFTLGWVAKRYPQVVRRIVA
AGHELASHGYGHERVWEIGPRAFREDLIRAKGLLEDTGGVPVVGYRAPAFSIGPRTPWAREILQETGHRYSSSVYPVRHD
HYGTPEAPRHAHRPDGQGGLLELPPATLRLLGRNLPAGGGGYFRLLPYRVSWAALRWIAQAEGQPAVFYIHPWELDPEQP
RVPGIDLRTRVRHYVNLHRTEQRLSRLLQDLDWDRIDRVFAPELAGVSDWQAGQAVSAQAF

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34278; Mature: 34278

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEERSWARCNALTVDVEDYFQVLAMAPYVGRDAWERWPCRIEASMDRLLQICADRCVCGT
CCCCCCCCCCEEEECHHHHHHHHHHCCHHCCHHHHHCCEEEHHHHHHHHHHHHHHHHHHH
FFTLGWVAKRYPQVVRRIVAAGHELASHGYGHERVWEIGPRAFREDLIRAKGLLEDTGGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHCCHHCCCCC
PVVGYRAPAFSIGPRTPWAREILQETGHRYSSSVYPVRHDHYGTPEAPRHAHRPDGQGGL
CEEEECCCCCCCCCCCHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
LELPPATLRLLGRNLPAGGGGYFRLLPYRVSWAALRWIAQAEGQPAVFYIHPWELDPEQP
EECCHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCC
RVPGIDLRTRVRHYVNLHRTEQRLSRLLQDLDWDRIDRVFAPELAGVSDWQAGQAVSAQA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
F
C
>Mature Secondary Structure
MEERSWARCNALTVDVEDYFQVLAMAPYVGRDAWERWPCRIEASMDRLLQICADRCVCGT
CCCCCCCCCCEEEECHHHHHHHHHHCCHHCCHHHHHCCEEEHHHHHHHHHHHHHHHHHHH
FFTLGWVAKRYPQVVRRIVAAGHELASHGYGHERVWEIGPRAFREDLIRAKGLLEDTGGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHCCHHCCCCC
PVVGYRAPAFSIGPRTPWAREILQETGHRYSSSVYPVRHDHYGTPEAPRHAHRPDGQGGL
CEEEECCCCCCCCCCCHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
LELPPATLRLLGRNLPAGGGGYFRLLPYRVSWAALRWIAQAEGQPAVFYIHPWELDPEQP
EECCHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCC
RVPGIDLRTRVRHYVNLHRTEQRLSRLLQDLDWDRIDRVFAPELAGVSDWQAGQAVSAQA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
F
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA