| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is exeA [H]
Identifier: 121998300
GI number: 121998300
Start: 1645072
End: 1646187
Strand: Reverse
Name: exeA [H]
Synonym: Hhal_1518
Alternate gene names: 121998300
Gene position: 1646187-1645072 (Counterclockwise)
Preceding gene: 121998301
Following gene: 121998299
Centisome position: 61.46
GC content: 61.83
Gene sequence:
>1116_bases ATGTATGAAGACTTCTACGGCCTGCGCGACAAGCCATTCGCGCTGAGCCCCGATCCACGTTTCTTCTACGCCAGCAAAGG CCACCGCCGGGCGATGGCCTACCTGGAGTATGGGGTGCAGCAGGGCGAGGGCTTTATCGTCATCACCGGAGAGGTCGGTG CCGGTAAGACGACCATGGCGCGGAGTCTACTCAGCGGCATCGTTGATCGCCCGCTGCTCGCGGCCCACCTGGTCAGCACC CGACTGAGCGCGGATAACCTGCTGCGGCTGGTCTGTCTCGCCTTCGGGATCGAGAACCCACCGCAGAACAAGGCCGATCA GTTGCGGGAGTTGGAGCGATTTCTTGTTCGGATTCGATCCCGTGGCCAGCGTGCGCTGCTCGTAGTGGACGAGGCGCAGA ACCTCAACGATGAAGCCGTCGAGGAGTTGCGCATGCTCTCGAACTTTCAGGGCGACGAGGGTGGCCCACTGCTGCAGAGC TTTCTGTTGGGTCAGCCGGAGTTTCGGCGACTCCTGCGCAGTGAGCATATGCAGCAGTTGCGTCAGCGGGTGATCGCCAC CTATCACCTCGGCCCGATGGATGCTGAAGATACCCGGGCCTACATCGAGCACCGGCTCGCCCAGGTGGGTTGGGAGGCGG ATCCGAGCTTCTCAGAGGGGGCGTGGCAGCGGATCTACGACTACACTCAGGGAACCCCGAGGCGGATCAATACGCTCTGC GACCGGTTGCTTCTGATGGGGTACTTGGAGGAGTGCCACGAGTTTACTGTCCGTGAGGTGCAGTCGGTTATCGACGAGGT GGAGGCCGATCTGGGCGAGGCGGATAACGGGGATGCAGCCCCGAGTTCTCCTTCGGAGCAGGATCCGGAAAACGCCCGGG AGGGGCTCGGTACCGACCGACAAACTCTAGAGCAGCGGCTGCAGCGGATCGAGCGTTACCTCGGTTTCACCTATAAGCGG GTACAGCAGCTGGTCAATGTTCAGCGTGAAGACCAGGAACGGCTGAATCAGCGCTTGGAGCGGGTTGAGCGTTATCTGAT TTCCGGCTACCGCCTGACGCGTCAGGTGAGTGGCTCGCTCAAGCGGGCACTGGAGGTAAACCGCGGGGAACCGTGA
Upstream 100 bases:
>100_bases CACCGGCAGCGCGTCGAGGGGCGTGAGGACCTCGCTTTGGACGAGCGCCGTCGCGAGAACCGCATCAGTGCCCGCCTGAC CATGGAATTCTAAGCCGCCT
Downstream 100 bases:
>100_bases CTGCCGCGTGGGGATGACGGGGGCGGAAAGGCCCCAAAGGGGGATGGGCCATGGAGGAGCGCAGCTGGGCGCGGTGCAAT GCGCTGACAGTGGATGTCGA
Product: AAA ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 371; Mature: 371
Protein sequence:
>371_residues MYEDFYGLRDKPFALSPDPRFFYASKGHRRAMAYLEYGVQQGEGFIVITGEVGAGKTTMARSLLSGIVDRPLLAAHLVST RLSADNLLRLVCLAFGIENPPQNKADQLRELERFLVRIRSRGQRALLVVDEAQNLNDEAVEELRMLSNFQGDEGGPLLQS FLLGQPEFRRLLRSEHMQQLRQRVIATYHLGPMDAEDTRAYIEHRLAQVGWEADPSFSEGAWQRIYDYTQGTPRRINTLC DRLLLMGYLEECHEFTVREVQSVIDEVEADLGEADNGDAAPSSPSEQDPENAREGLGTDRQTLEQRLQRIERYLGFTYKR VQQLVNVQREDQERLNQRLERVERYLISGYRLTRQVSGSLKRALEVNRGEP
Sequences:
>Translated_371_residues MYEDFYGLRDKPFALSPDPRFFYASKGHRRAMAYLEYGVQQGEGFIVITGEVGAGKTTMARSLLSGIVDRPLLAAHLVST RLSADNLLRLVCLAFGIENPPQNKADQLRELERFLVRIRSRGQRALLVVDEAQNLNDEAVEELRMLSNFQGDEGGPLLQS FLLGQPEFRRLLRSEHMQQLRQRVIATYHLGPMDAEDTRAYIEHRLAQVGWEADPSFSEGAWQRIYDYTQGTPRRINTLC DRLLLMGYLEECHEFTVREVQSVIDEVEADLGEADNGDAAPSSPSEQDPENAREGLGTDRQTLEQRLQRIERYLGFTYKR VQQLVNVQREDQERLNQRLERVERYLISGYRLTRQVSGSLKRALEVNRGEP >Mature_371_residues MYEDFYGLRDKPFALSPDPRFFYASKGHRRAMAYLEYGVQQGEGFIVITGEVGAGKTTMARSLLSGIVDRPLLAAHLVST RLSADNLLRLVCLAFGIENPPQNKADQLRELERFLVRIRSRGQRALLVVDEAQNLNDEAVEELRMLSNFQGDEGGPLLQS FLLGQPEFRRLLRSEHMQQLRQRVIATYHLGPMDAEDTRAYIEHRLAQVGWEADPSFSEGAWQRIYDYTQGTPRRINTLC DRLLLMGYLEECHEFTVREVQSVIDEVEADLGEADNGDAAPSSPSEQDPENAREGLGTDRQTLEQRLQRIERYLGFTYKR VQQLVNVQREDQERLNQRLERVERYLISGYRLTRQVSGSLKRALEVNRGEP
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]
COG id: COG3267
COG function: function code U; Type II secretory pathway, component ExeA (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm. Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the exeA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR002477 [H]
Pfam domain/function: PF00004 AAA; PF01471 PG_binding_1 [H]
EC number: NA
Molecular weight: Translated: 42564; Mature: 42564
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYEDFYGLRDKPFALSPDPRFFYASKGHRRAMAYLEYGVQQGEGFIVITGEVGAGKTTMA CCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHH RSLLSGIVDRPLLAAHLVSTRLSADNLLRLVCLAFGIENPPQNKADQLRELERFLVRIRS HHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH RGQRALLVVDEAQNLNDEAVEELRMLSNFQGDEGGPLLQSFLLGQPEFRRLLRSEHMQQL CCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHH RQRVIATYHLGPMDAEDTRAYIEHRLAQVGWEADPSFSEGAWQRIYDYTQGTPRRINTLC HHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHH DRLLLMGYLEECHEFTVREVQSVIDEVEADLGEADNGDAAPSSPSEQDPENAREGLGTDR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCH QTLEQRLQRIERYLGFTYKRVQQLVNVQREDQERLNQRLERVERYLISGYRLTRQVSGSL HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KRALEVNRGEP HHHHHHCCCCC >Mature Secondary Structure MYEDFYGLRDKPFALSPDPRFFYASKGHRRAMAYLEYGVQQGEGFIVITGEVGAGKTTMA CCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHH RSLLSGIVDRPLLAAHLVSTRLSADNLLRLVCLAFGIENPPQNKADQLRELERFLVRIRS HHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH RGQRALLVVDEAQNLNDEAVEELRMLSNFQGDEGGPLLQSFLLGQPEFRRLLRSEHMQQL CCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHH RQRVIATYHLGPMDAEDTRAYIEHRLAQVGWEADPSFSEGAWQRIYDYTQGTPRRINTLC HHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHH DRLLLMGYLEECHEFTVREVQSVIDEVEADLGEADNGDAAPSSPSEQDPENAREGLGTDR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCH QTLEQRLQRIERYLGFTYKRVQQLVNVQREDQERLNQRLERVERYLISGYRLTRQVSGSL HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KRALEVNRGEP HHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7961440 [H]