| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is surE
Identifier: 121998213
GI number: 121998213
Start: 1544076
End: 1544831
Strand: Reverse
Name: surE
Synonym: Hhal_1431
Alternate gene names: 121998213
Gene position: 1544831-1544076 (Counterclockwise)
Preceding gene: 121998215
Following gene: 121998212
Centisome position: 57.68
GC content: 67.33
Gene sequence:
>756_bases ATGTACATTCTGATCAGCAACGACGATGGTTACCAGGCCGAGGGGATTCTGAAGCTGGCTGAACGGTTGGGTACCGTGGC GAGGGTGACCGTGATGGCCCCGGAGCGGGATCGCAGCGGGGCCAGCAACTCGCTGACGCTGGAGGATCCCATCCGCGTCC ATCCCATCGAGCCCGACCGGTTCCGGGTCCAGGGCACACCGACCGACTGTGTGCACTTGGCGCTGACAGGGCTGCTGGAG GAGGATCCGGACATGGTCTTCTCCGGCATCAACGCCGGCGCCAATCTGGGCGATGATGTGCTTTACAGTGGCACGGTGGC AGCGGCGATGGAGGGGCGCTACCTCGGCCTGCCGGCGGTCGCCATCTCGCTGGCCGGTACCTGGGCGCCGGTGCACTACG ACACCGCCGCTCGGGTCGCCGTGAAACTGCTTGAGCAGATCCAGGATGACCCGCTCCCCCCGGACAGTATCCTCAACGTC AACGTGCCGGACCTGCCCTGGGACGAGATCCAGGGGTTTCACGCCACGCGGCTCGGCTGCCGGCATCGCGCCGAGCCGGT CATCAAGCAGCACGACCCGCGGGGGCGCACCATCTACTGGGTGGGGCCCCCGGGCTCGGAGCAGGACGCGGGTCCCGGGA CCGATTTCTACGCCGTACGCAACGGGTTTGTCTCGGTGACCCCGATCCAGGTCGATCTAACCCGGCATGCGGGGCTCGAG CAGGTCCGCGGCTGGCTGGACGGGGTGACGTGGTGA
Upstream 100 bases:
>100_bases TGGTCGCTCATGCCGAACCCCCACGGTGGTGCTCCGGGACACGTTATACTGCCAATCTTGGCGGCAACTGTGTGTTCGAG GCTTCGCCTGCAGGAGCAAG
Downstream 100 bases:
>100_bases TGCGCGAGCGGAACGCAGCGGGGATTGGCATGACCTCTCAACGGACCCGGGATCGGCTGGTGGATGCATTGGCGGCCCAG GGTATCCAGGACGAACGGGT
Product: stationary phase survival protein SurE
Products: NA
Alternate protein names: Nucleoside 5'-monophosphate phosphohydrolase
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MYILISNDDGYQAEGILKLAERLGTVARVTVMAPERDRSGASNSLTLEDPIRVHPIEPDRFRVQGTPTDCVHLALTGLLE EDPDMVFSGINAGANLGDDVLYSGTVAAAMEGRYLGLPAVAISLAGTWAPVHYDTAARVAVKLLEQIQDDPLPPDSILNV NVPDLPWDEIQGFHATRLGCRHRAEPVIKQHDPRGRTIYWVGPPGSEQDAGPGTDFYAVRNGFVSVTPIQVDLTRHAGLE QVRGWLDGVTW
Sequences:
>Translated_251_residues MYILISNDDGYQAEGILKLAERLGTVARVTVMAPERDRSGASNSLTLEDPIRVHPIEPDRFRVQGTPTDCVHLALTGLLE EDPDMVFSGINAGANLGDDVLYSGTVAAAMEGRYLGLPAVAISLAGTWAPVHYDTAARVAVKLLEQIQDDPLPPDSILNV NVPDLPWDEIQGFHATRLGCRHRAEPVIKQHDPRGRTIYWVGPPGSEQDAGPGTDFYAVRNGFVSVTPIQVDLTRHAGLE QVRGWLDGVTW >Mature_251_residues MYILISNDDGYQAEGILKLAERLGTVARVTVMAPERDRSGASNSLTLEDPIRVHPIEPDRFRVQGTPTDCVHLALTGLLE EDPDMVFSGINAGANLGDDVLYSGTVAAAMEGRYLGLPAVAISLAGTWAPVHYDTAARVAVKLLEQIQDDPLPPDSILNV NVPDLPWDEIQGFHATRLGCRHRAEPVIKQHDPRGRTIYWVGPPGSEQDAGPGTDFYAVRNGFVSVTPIQVDLTRHAGLE QVRGWLDGVTW
Specific function: Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
COG id: COG0496
COG function: function code R; Predicted acid phosphatase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the surE nucleotidase family
Homologues:
Organism=Escherichia coli, GI1789101, Length=250, Percent_Identity=58, Blast_Score=278, Evalue=3e-76,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): SURE_HALHL (A1WWY6)
Other databases:
- EMBL: CP000544 - RefSeq: YP_001003000.1 - ProteinModelPortal: A1WWY6 - SMR: A1WWY6 - STRING: A1WWY6 - GeneID: 4710550 - GenomeReviews: CP000544_GR - KEGG: hha:Hhal_1431 - eggNOG: COG0496 - HOGENOM: HBG600532 - OMA: NGFYYVN - PhylomeDB: A1WWY6 - ProtClustDB: PRK00346 - BioCyc: HHAL349124:HHAL_1431-MONOMER - GO: GO:0005737 - HAMAP: MF_00060 - InterPro: IPR002828 - Gene3D: G3DSA:3.40.1210.10 - TIGRFAMs: TIGR00087
Pfam domain/function: PF01975 SurE; SSF64167 SurE-like_Pase/nucleotidase
EC number: =3.1.3.5
Molecular weight: Translated: 27309; Mature: 27309
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYILISNDDGYQAEGILKLAERLGTVARVTVMAPERDRSGASNSLTLEDPIRVHPIEPDR CEEEEECCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCEEECCCEEEECCCCCC FRVQGTPTDCVHLALTGLLEEDPDMVFSGINAGANLGDDVLYSGTVAAAMEGRYLGLPAV EEEECCCHHHHHHHHHHHHCCCHHHEEECCCCCCCCCCCCEECCEEEEHHCCCCCCCHHH AISLAGTWAPVHYDTAARVAVKLLEQIQDDPLPPDSILNVNVPDLPWDEIQGFHATRLGC EEEECCCCCCEEECHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHCCCHHHHHHH RHRAEPVIKQHDPRGRTIYWVGPPGSEQDAGPGTDFYAVRNGFVSVTPIQVDLTRHAGLE HHCCCCHHHCCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCEEEEEEEEEEHHHCCHH QVRGWLDGVTW HHHHHHCCCCC >Mature Secondary Structure MYILISNDDGYQAEGILKLAERLGTVARVTVMAPERDRSGASNSLTLEDPIRVHPIEPDR CEEEEECCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCEEECCCEEEECCCCCC FRVQGTPTDCVHLALTGLLEEDPDMVFSGINAGANLGDDVLYSGTVAAAMEGRYLGLPAV EEEECCCHHHHHHHHHHHHCCCHHHEEECCCCCCCCCCCCEECCEEEEHHCCCCCCCHHH AISLAGTWAPVHYDTAARVAVKLLEQIQDDPLPPDSILNVNVPDLPWDEIQGFHATRLGC EEEECCCCCCEEECHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHCCCHHHHHHH RHRAEPVIKQHDPRGRTIYWVGPPGSEQDAGPGTDFYAVRNGFVSVTPIQVDLTRHAGLE HHCCCCHHHCCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCEEEEEEEEEEHHHCCHH QVRGWLDGVTW HHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA