| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is 121998095
Identifier: 121998095
GI number: 121998095
Start: 1423736
End: 1424038
Strand: Reverse
Name: 121998095
Synonym: Hhal_1313
Alternate gene names: NA
Gene position: 1424038-1423736 (Counterclockwise)
Preceding gene: 121998099
Following gene: 121998094
Centisome position: 53.17
GC content: 69.31
Gene sequence:
>303_bases ATGGATGAAGAAGGCACACGGTCGGACAGCTCGTCGGCCGACGCAGCGACGACGCCGGCAACGGTCGATGCTATCGAAGA CGGGGTGGCCCGCCTGCTCGTCGGTCTGGATCCGGCAGCGGTCTACGAGGTCGAGGTCGATCGGCTGCCCGAAGGGGTGG AGGAGGGTTCCGCCCTGCGGATTGAGGGGGCGCTGACGGACGGCCTGCGCAAGGCCCACTTCACGCTCGACCCGGCAGCC ACAGAGGCGCGCCGCGAGCGGGTCCGGACAAAACTCGATCAGCTGCGCGGGCGCAGCGACTGA
Upstream 100 bases:
>100_bases GGAGGATCGAACCGTGAGGAGCGTTGAGCGTACGGTGGCCGTCGCGCTCGTCTGGGCGGGCGTGGCGTCTGCAACCGGTT ATACGGAGGAATCGAGGATC
Downstream 100 bases:
>100_bases CGGCCGCTCCGCTGTCCCGAAGACGGCCAGGGCCTGGGGTGAGCAGGGTTTGATCAATCGCTGCAAAGCACCGCGCGGCG GCGATCCGCTCATCCTATCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 100; Mature: 100
Protein sequence:
>100_residues MDEEGTRSDSSSADAATTPATVDAIEDGVARLLVGLDPAAVYEVEVDRLPEGVEEGSALRIEGALTDGLRKAHFTLDPAA TEARRERVRTKLDQLRGRSD
Sequences:
>Translated_100_residues MDEEGTRSDSSSADAATTPATVDAIEDGVARLLVGLDPAAVYEVEVDRLPEGVEEGSALRIEGALTDGLRKAHFTLDPAA TEARRERVRTKLDQLRGRSD >Mature_100_residues MDEEGTRSDSSSADAATTPATVDAIEDGVARLLVGLDPAAVYEVEVDRLPEGVEEGSALRIEGALTDGLRKAHFTLDPAA TEARRERVRTKLDQLRGRSD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10708; Mature: 10708
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEEGTRSDSSSADAATTPATVDAIEDGVARLLVGLDPAAVYEVEVDRLPEGVEEGSALR CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEHHHCCCCCCCCCEEE IEGALTDGLRKAHFTLDPAATEARRERVRTKLDQLRGRSD ECCCHHCCHHHHCEEECCHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MDEEGTRSDSSSADAATTPATVDAIEDGVARLLVGLDPAAVYEVEVDRLPEGVEEGSALR CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEHHHCCCCCCCCCEEE IEGALTDGLRKAHFTLDPAATEARRERVRTKLDQLRGRSD ECCCHHCCHHHHCEEECCHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA