Definition Halorhodospira halophila SL1 chromosome, complete genome.
Accession NC_008789
Length 2,678,452

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The map label for this gene is 121998056

Identifier: 121998056

GI number: 121998056

Start: 1372397

End: 1372726

Strand: Reverse

Name: 121998056

Synonym: Hhal_1266

Alternate gene names: NA

Gene position: 1372726-1372397 (Counterclockwise)

Preceding gene: 121998057

Following gene: 121998053

Centisome position: 51.25

GC content: 62.12

Gene sequence:

>330_bases
ATGAGTTTGACCGACAAGACGTGCGTGCCGTGCCAGGGTGGTGTGGCACCCATGGATCGGCAGCAGGCCGAGCAGATGCT
GGTGCAGGTGCCGGAGTGGTCGCTGGACACCGACGCCCGCATGATCTATCGACGCTTTAAATTCCGTAACTTCATCGATG
CGCTGTCTTTCGTCAACCGAGTCACCGAGGTGGCCGAGGCGGAGGACCACCACCCGGATATCCTCCTCGGATACGGCTAC
GCCGAGGTGCGGATCCAGACGCACAAGATCGAGGGGCTGCACGAGAACGACTTCATCCTGGCGGCCAAGGTGGACGCGCT
CGGCGCTTAG

Upstream 100 bases:

>100_bases
TCCCCTGAGTGAATCCCGCGGGCTGTTTTGGGTGTCTCCTCTGCCCGTCATGCACCTAGACTGGGGGGACGCCTGATCAA
CGACGGTGGAGGTTGGCGCC

Downstream 100 bases:

>100_bases
CCGGGATCGTCACCCCAGTGCCCGGAGCGTCCGCCCCGCTTGTGGACGAGGCGGACGCCACCGATCTCCATGCCTCGGTC
GAGCCCCTTGCACATGTCGT

Product: transcriptional coactivator/pterin dehydratase

Products: NA

Alternate protein names: PHS; 4-alpha-hydroxy-tetrahydropterin dehydratase; Pterin carbinolamine dehydratase; PCD

Number of amino acids: Translated: 109; Mature: 108

Protein sequence:

>109_residues
MSLTDKTCVPCQGGVAPMDRQQAEQMLVQVPEWSLDTDARMIYRRFKFRNFIDALSFVNRVTEVAEAEDHHPDILLGYGY
AEVRIQTHKIEGLHENDFILAAKVDALGA

Sequences:

>Translated_109_residues
MSLTDKTCVPCQGGVAPMDRQQAEQMLVQVPEWSLDTDARMIYRRFKFRNFIDALSFVNRVTEVAEAEDHHPDILLGYGY
AEVRIQTHKIEGLHENDFILAAKVDALGA
>Mature_108_residues
SLTDKTCVPCQGGVAPMDRQQAEQMLVQVPEWSLDTDARMIYRRFKFRNFIDALSFVNRVTEVAEAEDHHPDILLGYGYA
EVRIQTHKIEGLHENDFILAAKVDALGA

Specific function: Unknown

COG id: COG2154

COG function: function code H; Pterin-4a-carbinolamine dehydratase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pterin-4-alpha-carbinolamine dehydratase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PHS_HALHL (A1WWH9)

Other databases:

- EMBL:   CP000544
- RefSeq:   YP_001002843.1
- ProteinModelPortal:   A1WWH9
- SMR:   A1WWH9
- STRING:   A1WWH9
- GeneID:   4710735
- GenomeReviews:   CP000544_GR
- KEGG:   hha:Hhal_1266
- eggNOG:   COG2154
- HOGENOM:   HBG705804
- OMA:   ILTEWGK
- BioCyc:   HHAL349124:HHAL_1266-MONOMER
- HAMAP:   MF_00434
- InterPro:   IPR001533
- Gene3D:   G3DSA:3.30.1360.20
- PANTHER:   PTHR12599

Pfam domain/function: PF01329 Pterin_4a; SSF55248 Trans_pterinDh

EC number: =4.2.1.96

Molecular weight: Translated: 12364; Mature: 12233

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLTDKTCVPCQGGVAPMDRQQAEQMLVQVPEWSLDTDARMIYRRFKFRNFIDALSFVNR
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VTEVAEAEDHHPDILLGYGYAEVRIQTHKIEGLHENDFILAAKVDALGA
HHHHHHCCCCCCCEEEECCEEEEEEEEEEECCCCCCCEEEEEECCCCCC
>Mature Secondary Structure 
SLTDKTCVPCQGGVAPMDRQQAEQMLVQVPEWSLDTDARMIYRRFKFRNFIDALSFVNR
CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VTEVAEAEDHHPDILLGYGYAEVRIQTHKIEGLHENDFILAAKVDALGA
HHHHHHCCCCCCCEEEECCEEEEEEEEEEECCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA