| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is 121998053
Identifier: 121998053
GI number: 121998053
Start: 1370551
End: 1371024
Strand: Reverse
Name: 121998053
Synonym: Hhal_1263
Alternate gene names: NA
Gene position: 1371024-1370551 (Counterclockwise)
Preceding gene: 121998056
Following gene: 121998052
Centisome position: 51.19
GC content: 62.87
Gene sequence:
>474_bases GTGGCGCAAGAAATCGAGCGCAAGTTCCTGCTTGTAAACGATCAATGGCGTGAATACGCAGACGCGGGGCAGCGTATGCG TCAGGGTTATCTGGTCGGTGCCCAGCGCGCCTCGATTCGGGTCCGGGTGGCCGGCGAGTACGCGTGGCTGAACATCAAGA GCGCCACCTTAGGGGTGGAGCGCCGCGAGTACGAGTATCCGATCCCGCTGCGGGATGCCGAAGAGATGCTTGCAGAACTC TGCGAGCGACCGCAGATCGAGAAGGTGCGCTACGAGGTGCCGTGGGCCGGGCATACTTGGGAGGTCGATGTCTTCGAGGG CGATAACGAGGGGCTGGTCGTCGCCGAGATCGAGCTGAGCGATGCCGAGGAGGCGTTCGAGCGCCCCCCCTGGATCGGTG AGGAGGTCTCGGACGACCCGCGCTATTACAACGTCTGCCTGATCCAGCACCCCTTCAGTCAATGGGCGAAGTGA
Upstream 100 bases:
>100_bases GTAATCGCTCGGGCCGGTATGGGCGAGGGGGCTCTGCTGTGACGGCGCGGGCTGCGGCTTGTATGGTAGCGCCAGTCACA CGCTTCAAGTGGAGGATGAA
Downstream 100 bases:
>100_bases GCAACATCCCGTCGAGCCGCTGGCTGAGTGTGGATCTGCTGGCGCAGCGGCTGACTCTGCTCGAGGGAGAGACGGCGCTT GGCGTGTATGCGGTGGCCAC
Product: adenylate cyclase
Products: NA
Alternate protein names: Adenylate Cyclase Family Protein; Adenylate Cyclase Protein; Adenylate Cyclase-Like Protein
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MAQEIERKFLLVNDQWREYADAGQRMRQGYLVGAQRASIRVRVAGEYAWLNIKSATLGVERREYEYPIPLRDAEEMLAEL CERPQIEKVRYEVPWAGHTWEVDVFEGDNEGLVVAEIELSDAEEAFERPPWIGEEVSDDPRYYNVCLIQHPFSQWAK
Sequences:
>Translated_157_residues MAQEIERKFLLVNDQWREYADAGQRMRQGYLVGAQRASIRVRVAGEYAWLNIKSATLGVERREYEYPIPLRDAEEMLAEL CERPQIEKVRYEVPWAGHTWEVDVFEGDNEGLVVAEIELSDAEEAFERPPWIGEEVSDDPRYYNVCLIQHPFSQWAK >Mature_156_residues AQEIERKFLLVNDQWREYADAGQRMRQGYLVGAQRASIRVRVAGEYAWLNIKSATLGVERREYEYPIPLRDAEEMLAELC ERPQIEKVRYEVPWAGHTWEVDVFEGDNEGLVVAEIELSDAEEAFERPPWIGEEVSDDPRYYNVCLIQHPFSQWAK
Specific function: Unknown
COG id: COG2954
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18408; Mature: 18277
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQEIERKFLLVNDQWREYADAGQRMRQGYLVGAQRASIRVRVAGEYAWLNIKSATLGVE CCCCCCCEEEEECHHHHHHHHHHHHHHCCEEEECCCCEEEEEEECCEEEEEEEHHEECCC RREYEYPIPLRDAEEMLAELCERPQIEKVRYEVPWAGHTWEVDVFEGDNEGLVVAEIELS CCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCEEEEEEEECCCCCEEEEEEECC DAEEAFERPPWIGEEVSDDPRYYNVCLIQHPFSQWAK CHHHHHHCCCCCCCCCCCCCCEEEEEEEECCHHHHCC >Mature Secondary Structure AQEIERKFLLVNDQWREYADAGQRMRQGYLVGAQRASIRVRVAGEYAWLNIKSATLGVE CCCCCCEEEEECHHHHHHHHHHHHHHCCEEEECCCCEEEEEEECCEEEEEEEHHEECCC RREYEYPIPLRDAEEMLAELCERPQIEKVRYEVPWAGHTWEVDVFEGDNEGLVVAEIELS CCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCEEEEEEEECCCCCEEEEEEECC DAEEAFERPPWIGEEVSDDPRYYNVCLIQHPFSQWAK CHHHHHHCCCCCCCCCCCCCCEEEEEEEECCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA