Definition Halorhodospira halophila SL1 chromosome, complete genome.
Accession NC_008789
Length 2,678,452

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The map label for this gene is 121998052

Identifier: 121998052

GI number: 121998052

Start: 1370021

End: 1370563

Strand: Reverse

Name: 121998052

Synonym: Hhal_1262

Alternate gene names: NA

Gene position: 1370563-1370021 (Counterclockwise)

Preceding gene: 121998053

Following gene: 121998051

Centisome position: 51.17

GC content: 68.88

Gene sequence:

>543_bases
ATGGGCGAAGTGAGCAACATCCCGTCGAGCCGCTGGCTGAGTGTGGATCTGCTGGCGCAGCGGCTGACTCTGCTCGAGGG
AGAGACGGCGCTTGGCGTGTATGCGGTGGCCACGGGCGCCCGAGGCGCCGGTGAGCGCAATGGCAGTGGTGGCACCCCGC
GAGGCTGGCACTGCGTGCGGGCACGGATCGGTGCCGGTGCCCCGAGCGGTGCCGTCTTCGTGGGCCGTCGCTGGACCGGC
GAGGTGTGGACACCGACCCTGCATCACGACCACCCCGAGCGCGACTGGATCCTGAGCCGCATCCTGTGGCTCTCCGGCCT
GGAGCGCGGGGTGAATCGGCTTGGCGCAGTGGATACCATGAGACGGTTCATCTACATCCACGGGTGCCCGGATAGCGAGC
CTGTTGGCGTACCGTGCTCCCACGGATGCGTTCGTATGCGTAACGCGGCCGTGATCGACCTGTTCGATGCGGTGACTGGA
GGCACCCCGGTTTGGATCGGTCCGCCCTGGCCGACCCGGCCCGTGCCGGCCAGGGCTGGGTGA

Upstream 100 bases:

>100_bases
ATGCCGAGGAGGCGTTCGAGCGCCCCCCCTGGATCGGTGAGGAGGTCTCGGACGACCCGCGCTATTACAACGTCTGCCTG
ATCCAGCACCCCTTCAGTCA

Downstream 100 bases:

>100_bases
TCGGGGCGACAGGGAGGAGCACGCCATGCTGGGCCCGCTCATGATTGGAATCGCGGGGGGTGAACTCCCAGCGCAGGCGC
GAGAGCTCCTGCGGCATCCG

Product: ErfK/YbiS/YcfS/YnhG family protein

Products: NA

Alternate protein names: ErfK/YbiS/YcfS/YnhG; ErfK/YbiS/YcfS/YnhG Superfamily; ErfK/SrfK Family Protein; ErfK/YbiS/YcfS/YnhG Protein

Number of amino acids: Translated: 180; Mature: 179

Protein sequence:

>180_residues
MGEVSNIPSSRWLSVDLLAQRLTLLEGETALGVYAVATGARGAGERNGSGGTPRGWHCVRARIGAGAPSGAVFVGRRWTG
EVWTPTLHHDHPERDWILSRILWLSGLERGVNRLGAVDTMRRFIYIHGCPDSEPVGVPCSHGCVRMRNAAVIDLFDAVTG
GTPVWIGPPWPTRPVPARAG

Sequences:

>Translated_180_residues
MGEVSNIPSSRWLSVDLLAQRLTLLEGETALGVYAVATGARGAGERNGSGGTPRGWHCVRARIGAGAPSGAVFVGRRWTG
EVWTPTLHHDHPERDWILSRILWLSGLERGVNRLGAVDTMRRFIYIHGCPDSEPVGVPCSHGCVRMRNAAVIDLFDAVTG
GTPVWIGPPWPTRPVPARAG
>Mature_179_residues
GEVSNIPSSRWLSVDLLAQRLTLLEGETALGVYAVATGARGAGERNGSGGTPRGWHCVRARIGAGAPSGAVFVGRRWTGE
VWTPTLHHDHPERDWILSRILWLSGLERGVNRLGAVDTMRRFIYIHGCPDSEPVGVPCSHGCVRMRNAAVIDLFDAVTGG
TPVWIGPPWPTRPVPARAG

Specific function: Unknown

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19376; Mature: 19245

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEVSNIPSSRWLSVDLLAQRLTLLEGETALGVYAVATGARGAGERNGSGGTPRGWHCVR
CCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEE
ARIGAGAPSGAVFVGRRWTGEVWTPTLHHDHPERDWILSRILWLSGLERGVNRLGAVDTM
HHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRFIYIHGCPDSEPVGVPCSHGCVRMRNAAVIDLFDAVTGGTPVWIGPPWPTRPVPARAG
HHEEEEECCCCCCCCCCCCCCCCEECCCCCEEEHHHHHCCCCEEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
GEVSNIPSSRWLSVDLLAQRLTLLEGETALGVYAVATGARGAGERNGSGGTPRGWHCVR
CCCCCCCCCCEEHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEE
ARIGAGAPSGAVFVGRRWTGEVWTPTLHHDHPERDWILSRILWLSGLERGVNRLGAVDTM
HHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRFIYIHGCPDSEPVGVPCSHGCVRMRNAAVIDLFDAVTGGTPVWIGPPWPTRPVPARAG
HHEEEEECCCCCCCCCCCCCCCCEECCCCCEEEHHHHHCCCCEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA