| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is yhhP [C]
Identifier: 121998008
GI number: 121998008
Start: 1322954
End: 1323187
Strand: Reverse
Name: yhhP [C]
Synonym: Hhal_1218
Alternate gene names: 121998008
Gene position: 1323187-1322954 (Counterclockwise)
Preceding gene: 121998009
Following gene: 121998007
Centisome position: 49.4
GC content: 67.09
Gene sequence:
>234_bases ATGGCGACGACTGAAGAACTCGACTGCCGCCATCTCCTTTGCCCCCTGCCTGTGATTCGCACCCAGGCGCAGGTGGCTCG GCTAAGCGTCGGCGACGAGCTCGAGGTGGTGGTTACGGACCCCGGGGCCCTGGAGGATATCCCTGCCTGGTGCCGGGTCC ATGGCCACGAGGTCGTGGGTGCCCGCGAGACGGGCGATGAGCATCGGATTCGCATCCGCGTCGGCGGTTCGTGA
Upstream 100 bases:
>100_bases GATCTGGAATTCGAGGATACGGACGGCCAGGTACGAGCGCTCTCGGTGCCGCCCATGGCGACCGATAGCGTTCCCGACGC GTGGTATGTGGGAGGCGCCC
Downstream 100 bases:
>100_bases CCACTGCGCGGGCGCAGCGTCACGCCGCGGGTGCGTTGGGCCGCGAAATGCCCCACAATAAGTCGCGGCTGCGGGGCTTT GCACCTTCCCGGCGCACGCT
Product: SirA family protein
Products: NA
Alternate protein names: SirA-Like Protein; Protein Family UPF
Number of amino acids: Translated: 77; Mature: 76
Protein sequence:
>77_residues MATTEELDCRHLLCPLPVIRTQAQVARLSVGDELEVVVTDPGALEDIPAWCRVHGHEVVGARETGDEHRIRIRVGGS
Sequences:
>Translated_77_residues MATTEELDCRHLLCPLPVIRTQAQVARLSVGDELEVVVTDPGALEDIPAWCRVHGHEVVGARETGDEHRIRIRVGGS >Mature_76_residues ATTEELDCRHLLCPLPVIRTQAQVARLSVGDELEVVVTDPGALEDIPAWCRVHGHEVVGARETGDEHRIRIRVGGS
Specific function: Unknown
COG id: COG0425
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8438; Mature: 8307
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATTEELDCRHLLCPLPVIRTQAQVARLSVGDELEVVVTDPGALEDIPAWCRVHGHEVVG CCCCCCCCCCEEECCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCEEECCCEEEC ARETGDEHRIRIRVGGS CCCCCCCEEEEEEECCC >Mature Secondary Structure ATTEELDCRHLLCPLPVIRTQAQVARLSVGDELEVVVTDPGALEDIPAWCRVHGHEVVG CCCCCCCCCEEECCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCEEECCCEEEC ARETGDEHRIRIRVGGS CCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA