Definition Halorhodospira halophila SL1 chromosome, complete genome.
Accession NC_008789
Length 2,678,452

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The map label for this gene is 121997930

Identifier: 121997930

GI number: 121997930

Start: 1238514

End: 1238654

Strand: Reverse

Name: 121997930

Synonym: Hhal_1139

Alternate gene names: NA

Gene position: 1238654-1238514 (Counterclockwise)

Preceding gene: 121997938

Following gene: 121997929

Centisome position: 46.25

GC content: 60.99

Gene sequence:

>141_bases
ATGCGCTTGTACCTCTACCTGGTCGTCGGGCTGATGATCCTCATGCTGGTCTGGACGTTCTTTCTCTGGGATCCCGAGGA
GATGATCCCGCCGGCCACCGAGCGTGAGGCACCTGTCCACCCCGAGGAGCAGCAGGAGTAA

Upstream 100 bases:

>100_bases
GTTTCCGATGGGCGGGCATTCTACCGTGTTACGCCGTGAGGTCTGCCCCTCGGGATACGCCGGCTGTTATCGTACTGGTA
ACGTCGCTCAGGAGTCCGCC

Downstream 100 bases:

>100_bases
TCAACGTGGCAGGACATGCCGGCGACGTGTTTCAGCCCCTGGCCCTGGCGGTGCTCACTGTTTCCGATACCCGCGGGCTG
GCCGAGGACACCTCCGGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 46; Mature: 46

Protein sequence:

>46_residues
MRLYLYLVVGLMILMLVWTFFLWDPEEMIPPATEREAPVHPEEQQE

Sequences:

>Translated_46_residues
MRLYLYLVVGLMILMLVWTFFLWDPEEMIPPATEREAPVHPEEQQE
>Mature_46_residues
MRLYLYLVVGLMILMLVWTFFLWDPEEMIPPATEREAPVHPEEQQE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5563; Mature: 5563

Theoretical pI: Translated: 3.92; Mature: 3.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
8.7 %Met     (Translated Protein)
8.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
8.7 %Met     (Mature Protein)
8.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLYLYLVVGLMILMLVWTFFLWDPEEMIPPATEREAPVHPEEQQE
CHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRLYLYLVVGLMILMLVWTFFLWDPEEMIPPATEREAPVHPEEQQE
CHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA