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The map label for this gene is 121997938

Identifier: 121997938

GI number: 121997938

Start: 1246569

End: 1249148

Strand: Reverse

Name: 121997938

Synonym: Hhal_1147

Alternate gene names: NA

Gene position: 1249148-1246569 (Counterclockwise)

Preceding gene: 121997940

Following gene: 121997930

Centisome position: 46.64

GC content: 46.55

Gene sequence:

>2580_bases
TTGAGAGTATGGGTTCTCATTGCCCCGTTAATTATGTTACAAGCAAAAAATGGCACGCTATCGATCGAAAATGCAGGAGC
ACAAATAATGACTGTAGATTTTTCTAACTTGGCCCGAGGTAGCGGTGAAGTAATTACTGAACCGAGGAAAATATTCACAA
CTCTTCCAAGTAAAGACAAAAAGTTTTCATATTTGAGGGATGTCCAAGGTCAAGTCCTAGAACGTTGGTACGAGCGCCGT
AAAGAGAAAGATCTTATAATAAAAATGAACACTGGCAGTGGCAAGACTACTGTCGGGCTGCTAATACTCCAAAGTTCTCT
CCGAGAAAAAATATCACCAGTCGTCTATGTTGCTCCAGATCGGTTCCTGGCGGATCAGGTGCTTAATGAAGCTACTTTGC
TCGGAGTTGAAGCGACAAATAATGAAGACGATCCAGGATTTACGGCAGGTCGAAAAGTTCTGGTTACCTATGTGCATAAA
CTATTGAATGGACGCTCACGATTTGGCGTAGGCGAAGAAGGCAGAAAAATAGAAATTGGCACTTTGTTAATCGATGATGC
TCATGCTTGCCTCGAAACTACGCGAGATCAATTCAAGATAACAATTCCAAGTAACCATTTAGCCTACAGTAAAATCTTAG
ACTTATTTTACGATTCACTTTATGATCAAAGCCCTCGGGCAGCACTGGATATACGATCAGGTGATCCATTCTCATATCAA
GAGGTGCCCTTCTGGGTGTGGCAGCAGAAAAACGAAGAACTTGTTAAAATCTTGCACGAGCATAAAAGCGACGACAGCAT
CAAGTTTAATTTTCCACTTATTGCTGACGTTCTACAGCTCTGCCGTTACGTAATTGGTGGCAGTGAGATAGAAATCGCGC
CGACCTGTATTCCAATAGATGTCATACCGTCCTTTGCATACGCACAAAGGCGCATCTACATGACAGCGACGCTCTCTGAC
GATAGCGTCTTAGTTACCGAGTTCAATGCGGATCCAGAAGCGATCCATAAAGTCATTACACCGAAAACAGCGGATGATCT
TGGCGAGCGGATGATCCTGGTCCCACAGGAAGTCAATCCAGACATACAACTCCCATCTATAAAGGGAATGCTTCAAGGGT
TCGCTAAGAAATATAATGTTGTCGTGATTGTTCCTTCCCTCCGGGCAGTAACGCAATGGAAGGATATATCAGATCAGATC
CTCATCGCCCAAAACATGACTGCTGGCGTGAGACGTCTTAGGGATGAGCACGTTGGTTTATCAGTTCTTGTCAATAAATA
CGATGGCATTGACCTGCCTGACGGGGCCTGCAGGATTCTTGTGATTGATGGTTTGCCAGAAGCGCGCTCCTTGATCCAGC
GCACCGACACTGCCGCGCTTGATGAGACTGAAGTCACTCTTCGGAGACAAATACAAAGGATCGAACAGGGTATGGGCCGA
GGAGTTCGGTCTAATGATGATCACTGCGTTGTATTGCTTGTTGGAGCTGGATTAAGCCGGAGACTTCATTCCGCAAAAGG
ACGTAAAAAGTTTACGCCGGCGACCAAGGCGCAGTTAGACTTATCTGCAGAGCTTGCCCAGCAATTGGAAGGTGGCGGTG
TCGCAGATCTCGAAAATGTAATTAGTAAATGTTTGGATCGTGATCCAGGCTGGATAGAGGCTAGTAAAAGGGCGCTAGTC
GACGTTGAACCACCGAGCGAGGGGCGCTTGGAGCCATCGGCTGTGGCATTAAGGCAAGCATTTAATACAGCGTTGGTAGG
GCAATTCCCAAAAGCGGCTGAAATTATACAGAAAGCTGTTAATTGTGCGGAGGAAGCGCGACTAAAGGCGTGGTTGAAAG
TCAGGTTGGCCGAGTTGAAGAATTTTTATGACCCGTCCACGGCGCAGGAAATACTATTGTCTGCGCATAAGCAAAATCGT
CAAGTGACACGCCCTCTTAGAGGTGTGGGCTATCAGAAGCTGTCGATCGCAACGGATGCTCAGGTATCAAAAGTTATTCA
ATACAGGCAAGAAAGCTTTCTTGAACACAACGATTTGCTCTTGTGGGTGAATGAACTTAAAGCAGACCTTAGGTATTCGC
CGGAACATCCAAACCAGCGATTTGAGAGGGCTGTTGCCGATATTGGGCGACTTCTTGGATTTGCGACGCAAAGACCAGAA
ATTGATTTTGGGCAAGGCCCGGATGGTTTATGGGCGCTCGATGGTGGTCGATTCCTTGTTCTTGAGTGCAAGAACCGTTC
AGAAGCTGATGTGATTGCAAAGGGTGAGGTAGATCAGTTGTCGGGTTCAATGAATTGGTTCGTTGACAGGTATGGGGAAG
TTCCTGAGGCCATACCTGTTATGGCTCATCCAAAGTATGTCTTGGATAAGCAGGCGTCGCCGCCGGAAGGGATGAGGATA
ATATCGGAGAAGCAGCTAAAAGACTTGATCGACGCGTTAACCAAATTTGCCGAGTCTCTTGGCGCTCCTGGGATGTTAGA
AAATCCTAAGCGAGTGCACGAGGCGTTACACGATCATGGCCTATCGTCCACAGAATTCATAAGAACGCACACGAGGGACC
CTTCACGTAAGGGTATATAG

Upstream 100 bases:

>100_bases
GTCGGCCTACTACCCCCGCGGCAATCAGGTGTCACCTATACAATCCGCGAGAGGACCGGTAATACCGCTCTTATAAACCC
CATCACCTTCTTCAACTAAT

Downstream 100 bases:

>100_bases
GCTTTTATAGCCCGACCGCCTGCTGGTCGCCCCCACTGCGTAGAATCAAATTTCAAGCGCAACACCCGAGAAAAAAGAGA
AGATTTTCGGCGTTCAGGCT

Product: DEAD-like helicases-like

Products: NA

Alternate protein names: DEAD-Like Helicase; Helicase; Dead/Deah Box Helicase Domain Protein; Dead-Like Helicase; DEAD-Like Helicases-Like; DEAD/DEAH Box Helicase Domain Protein

Number of amino acids: Translated: 859; Mature: 859

Protein sequence:

>859_residues
MRVWVLIAPLIMLQAKNGTLSIENAGAQIMTVDFSNLARGSGEVITEPRKIFTTLPSKDKKFSYLRDVQGQVLERWYERR
KEKDLIIKMNTGSGKTTVGLLILQSSLREKISPVVYVAPDRFLADQVLNEATLLGVEATNNEDDPGFTAGRKVLVTYVHK
LLNGRSRFGVGEEGRKIEIGTLLIDDAHACLETTRDQFKITIPSNHLAYSKILDLFYDSLYDQSPRAALDIRSGDPFSYQ
EVPFWVWQQKNEELVKILHEHKSDDSIKFNFPLIADVLQLCRYVIGGSEIEIAPTCIPIDVIPSFAYAQRRIYMTATLSD
DSVLVTEFNADPEAIHKVITPKTADDLGERMILVPQEVNPDIQLPSIKGMLQGFAKKYNVVVIVPSLRAVTQWKDISDQI
LIAQNMTAGVRRLRDEHVGLSVLVNKYDGIDLPDGACRILVIDGLPEARSLIQRTDTAALDETEVTLRRQIQRIEQGMGR
GVRSNDDHCVVLLVGAGLSRRLHSAKGRKKFTPATKAQLDLSAELAQQLEGGGVADLENVISKCLDRDPGWIEASKRALV
DVEPPSEGRLEPSAVALRQAFNTALVGQFPKAAEIIQKAVNCAEEARLKAWLKVRLAELKNFYDPSTAQEILLSAHKQNR
QVTRPLRGVGYQKLSIATDAQVSKVIQYRQESFLEHNDLLLWVNELKADLRYSPEHPNQRFERAVADIGRLLGFATQRPE
IDFGQGPDGLWALDGGRFLVLECKNRSEADVIAKGEVDQLSGSMNWFVDRYGEVPEAIPVMAHPKYVLDKQASPPEGMRI
ISEKQLKDLIDALTKFAESLGAPGMLENPKRVHEALHDHGLSSTEFIRTHTRDPSRKGI

Sequences:

>Translated_859_residues
MRVWVLIAPLIMLQAKNGTLSIENAGAQIMTVDFSNLARGSGEVITEPRKIFTTLPSKDKKFSYLRDVQGQVLERWYERR
KEKDLIIKMNTGSGKTTVGLLILQSSLREKISPVVYVAPDRFLADQVLNEATLLGVEATNNEDDPGFTAGRKVLVTYVHK
LLNGRSRFGVGEEGRKIEIGTLLIDDAHACLETTRDQFKITIPSNHLAYSKILDLFYDSLYDQSPRAALDIRSGDPFSYQ
EVPFWVWQQKNEELVKILHEHKSDDSIKFNFPLIADVLQLCRYVIGGSEIEIAPTCIPIDVIPSFAYAQRRIYMTATLSD
DSVLVTEFNADPEAIHKVITPKTADDLGERMILVPQEVNPDIQLPSIKGMLQGFAKKYNVVVIVPSLRAVTQWKDISDQI
LIAQNMTAGVRRLRDEHVGLSVLVNKYDGIDLPDGACRILVIDGLPEARSLIQRTDTAALDETEVTLRRQIQRIEQGMGR
GVRSNDDHCVVLLVGAGLSRRLHSAKGRKKFTPATKAQLDLSAELAQQLEGGGVADLENVISKCLDRDPGWIEASKRALV
DVEPPSEGRLEPSAVALRQAFNTALVGQFPKAAEIIQKAVNCAEEARLKAWLKVRLAELKNFYDPSTAQEILLSAHKQNR
QVTRPLRGVGYQKLSIATDAQVSKVIQYRQESFLEHNDLLLWVNELKADLRYSPEHPNQRFERAVADIGRLLGFATQRPE
IDFGQGPDGLWALDGGRFLVLECKNRSEADVIAKGEVDQLSGSMNWFVDRYGEVPEAIPVMAHPKYVLDKQASPPEGMRI
ISEKQLKDLIDALTKFAESLGAPGMLENPKRVHEALHDHGLSSTEFIRTHTRDPSRKGI
>Mature_859_residues
MRVWVLIAPLIMLQAKNGTLSIENAGAQIMTVDFSNLARGSGEVITEPRKIFTTLPSKDKKFSYLRDVQGQVLERWYERR
KEKDLIIKMNTGSGKTTVGLLILQSSLREKISPVVYVAPDRFLADQVLNEATLLGVEATNNEDDPGFTAGRKVLVTYVHK
LLNGRSRFGVGEEGRKIEIGTLLIDDAHACLETTRDQFKITIPSNHLAYSKILDLFYDSLYDQSPRAALDIRSGDPFSYQ
EVPFWVWQQKNEELVKILHEHKSDDSIKFNFPLIADVLQLCRYVIGGSEIEIAPTCIPIDVIPSFAYAQRRIYMTATLSD
DSVLVTEFNADPEAIHKVITPKTADDLGERMILVPQEVNPDIQLPSIKGMLQGFAKKYNVVVIVPSLRAVTQWKDISDQI
LIAQNMTAGVRRLRDEHVGLSVLVNKYDGIDLPDGACRILVIDGLPEARSLIQRTDTAALDETEVTLRRQIQRIEQGMGR
GVRSNDDHCVVLLVGAGLSRRLHSAKGRKKFTPATKAQLDLSAELAQQLEGGGVADLENVISKCLDRDPGWIEASKRALV
DVEPPSEGRLEPSAVALRQAFNTALVGQFPKAAEIIQKAVNCAEEARLKAWLKVRLAELKNFYDPSTAQEILLSAHKQNR
QVTRPLRGVGYQKLSIATDAQVSKVIQYRQESFLEHNDLLLWVNELKADLRYSPEHPNQRFERAVADIGRLLGFATQRPE
IDFGQGPDGLWALDGGRFLVLECKNRSEADVIAKGEVDQLSGSMNWFVDRYGEVPEAIPVMAHPKYVLDKQASPPEGMRI
ISEKQLKDLIDALTKFAESLGAPGMLENPKRVHEALHDHGLSSTEFIRTHTRDPSRKGI

Specific function: Unknown

COG id: COG1204

COG function: function code R; Superfamily II helicase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 95932; Mature: 95932

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVWVLIAPLIMLQAKNGTLSIENAGAQIMTVDFSNLARGSGEVITEPRKIFTTLPSKDK
CEEEEEEHHHHHEECCCCEEEEECCCCEEEEEEHHHHCCCCCCEECCCHHHHHCCCCCCC
KFSYLRDVQGQVLERWYERRKEKDLIIKMNTGSGKTTVGLLILQSSLREKISPVVYVAPD
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEECCC
RFLADQVLNEATLLGVEATNNEDDPGFTAGRKVLVTYVHKLLNGRSRFGVGEEGRKIEIG
HHHHHHHHCHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEE
TLLIDDAHACLETTRDQFKITIPSNHLAYSKILDLFYDSLYDQSPRAALDIRSGDPFSYQ
EEEECCHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCC
EVPFWVWQQKNEELVKILHEHKSDDSIKFNFPLIADVLQLCRYVIGGSEIEIAPTCIPID
CCCEEEECCCCHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHCCCEEEEECCEEEHH
VIPSFAYAQRRIYMTATLSDDSVLVTEFNADPEAIHKVITPKTADDLGERMILVPQEVNP
HHCCHHHHCCEEEEEEEECCCCEEEEEECCCHHHHHHHCCCCCHHHHCCEEEEEECCCCC
DIQLPSIKGMLQGFAKKYNVVVIVPSLRAVTQWKDISDQILIAQNMTAGVRRLRDEHVGL
CCCCCHHHHHHHHHHHHCCEEEEECCCHHHHHHCCCCCCEEEECCHHHHHHHHHHHCCCE
SVLVNKYDGIDLPDGACRILVIDGLPEARSLIQRTDTAALDETEVTLRRQIQRIEQGMGR
EEEEECCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC
GVRSNDDHCVVLLVGAGLSRRLHSAKGRKKFTPATKAQLDLSAELAQQLEGGGVADLENV
CCCCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHH
ISKCLDRDPGWIEASKRALVDVEPPSEGRLEPSAVALRQAFNTALVGQFPKAAEIIQKAV
HHHHHCCCCCCEECCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
NCAEEARLKAWLKVRLAELKNFYDPSTAQEILLSAHKQNRQVTRPLRGVGYQKLSIATDA
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCEEEEECCHH
QVSKVIQYRQESFLEHNDLLLWVNELKADLRYSPEHPNQRFERAVADIGRLLGFATQRPE
HHHHHHHHHHHHHHCCCCEEEEEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
IDFGQGPDGLWALDGGRFLVLECKNRSEADVIAKGEVDQLSGSMNWFVDRYGEVPEAIPV
CCCCCCCCCEEEECCCEEEEEEECCCCCCCEEECCCHHHHCCCHHHHHHHHCCCCCCCCC
MAHPKYVLDKQASPPEGMRIISEKQLKDLIDALTKFAESLGAPGMLENPKRVHEALHDHG
CCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCC
LSSTEFIRTHTRDPSRKGI
CCCHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MRVWVLIAPLIMLQAKNGTLSIENAGAQIMTVDFSNLARGSGEVITEPRKIFTTLPSKDK
CEEEEEEHHHHHEECCCCEEEEECCCCEEEEEEHHHHCCCCCCEECCCHHHHHCCCCCCC
KFSYLRDVQGQVLERWYERRKEKDLIIKMNTGSGKTTVGLLILQSSLREKISPVVYVAPD
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEECCC
RFLADQVLNEATLLGVEATNNEDDPGFTAGRKVLVTYVHKLLNGRSRFGVGEEGRKIEIG
HHHHHHHHCHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEE
TLLIDDAHACLETTRDQFKITIPSNHLAYSKILDLFYDSLYDQSPRAALDIRSGDPFSYQ
EEEECCHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCC
EVPFWVWQQKNEELVKILHEHKSDDSIKFNFPLIADVLQLCRYVIGGSEIEIAPTCIPID
CCCEEEECCCCHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHCCCEEEEECCEEEHH
VIPSFAYAQRRIYMTATLSDDSVLVTEFNADPEAIHKVITPKTADDLGERMILVPQEVNP
HHCCHHHHCCEEEEEEEECCCCEEEEEECCCHHHHHHHCCCCCHHHHCCEEEEEECCCCC
DIQLPSIKGMLQGFAKKYNVVVIVPSLRAVTQWKDISDQILIAQNMTAGVRRLRDEHVGL
CCCCCHHHHHHHHHHHHCCEEEEECCCHHHHHHCCCCCCEEEECCHHHHHHHHHHHCCCE
SVLVNKYDGIDLPDGACRILVIDGLPEARSLIQRTDTAALDETEVTLRRQIQRIEQGMGR
EEEEECCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC
GVRSNDDHCVVLLVGAGLSRRLHSAKGRKKFTPATKAQLDLSAELAQQLEGGGVADLENV
CCCCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHH
ISKCLDRDPGWIEASKRALVDVEPPSEGRLEPSAVALRQAFNTALVGQFPKAAEIIQKAV
HHHHHCCCCCCEECCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
NCAEEARLKAWLKVRLAELKNFYDPSTAQEILLSAHKQNRQVTRPLRGVGYQKLSIATDA
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCEEEEECCHH
QVSKVIQYRQESFLEHNDLLLWVNELKADLRYSPEHPNQRFERAVADIGRLLGFATQRPE
HHHHHHHHHHHHHHCCCCEEEEEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
IDFGQGPDGLWALDGGRFLVLECKNRSEADVIAKGEVDQLSGSMNWFVDRYGEVPEAIPV
CCCCCCCCCEEEECCCEEEEEEECCCCCCCEEECCCHHHHCCCHHHHHHHHCCCCCCCCC
MAHPKYVLDKQASPPEGMRIISEKQLKDLIDALTKFAESLGAPGMLENPKRVHEALHDHG
CCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCC
LSSTEFIRTHTRDPSRKGI
CCCHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA