| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is glgP [H]
Identifier: 121997900
GI number: 121997900
Start: 1205837
End: 1208392
Strand: Reverse
Name: glgP [H]
Synonym: Hhal_1109
Alternate gene names: 121997900
Gene position: 1208392-1205837 (Counterclockwise)
Preceding gene: 121997901
Following gene: 121997896
Centisome position: 45.12
GC content: 67.02
Gene sequence:
>2556_bases ATGTCCGAACGCGTCTTCACCCTGGAAGTCCACCCCAATCTGCCACCCTCACTCGGCCGCCTGCGCGAGCTCGTCGACGA CCTCTACTACTCGTGGGATCGGCGCGTGCGGGGCTTGTTCTACCAGATCGACCCGGAATGCTGGGAGGCCAGCGGCCACA ACCCCAAGGTGTTCCTGCGGCGGGTGTCTCAGGAAGCGCTGGAGCGGGCCGCCCAGGATCCGACCTTTATTGAGGATTAC AACCGGACACTCTCCGCCTACGACACCTACCTGGAGCAGGAGACTTCGCCGGAGGTGACCCCGCACCTGGATCCGGGACA GGACCTGGTGGCCTACTTCTGTGCCGAGTTCGGGCTCCACGAGAGCCTGCCCCTCTACTCCGGGGGGCTGGGGATCCTGG CCGGTGACCACTGCAAGGCCGCCAGCGATCTGCGCGTACCGTTGGTTGCCGTGGGCCTGCTCTACCGTCAGGGCTACTTC ATCCAGACCATCGATCATGAAGGGTGTCAGGTCGCCCACTACGTACCCACCGAAGTGGCCCAGCTGCCCGCCTACCCGCG TCAGGACGGCGACGGCGAGGAGCTGCGCGTGTTCGTCGAGTTGCCCGGGCGCACGGTTCAGCTGCGCATCTGGTCAGTGC GGGCCGGGCACGTGCGCCTCTATATGCTCGATAGCGATGTTCCGGAGAACCGCCCCGAAGATCGCTCGATCACCTATCAG CTTTACGGCGGCGGCAGCGAGATGCGGATCAAGCAGGAACTCTGCCTCGGTATCGGCGGGGTGCGGGCGCTGCGCAAGCT GGGCGTGATGCCCACGGTCTGGCATCTCAACGAGGGCCATTCGGCCTTTCAGCTCGTCGAGCGTTGCCGCGAGTGGGTGG CCGCCGGCACTGACTTCGCCACGGCCCTGGAGGTGGTCGCCGGGACCTCGGTTTTCACCACGCATACCCCGGTGGCGGCT GGGCACGACATCTTCGACCCGGAGATGGTGCGGGAGTATCTGGACGCCGCGCTGGGAGAGAGCGGGCTGGATCTCGATGC CCTGCTGGAGCTGGGTAACGGCCGGGCCGAGCATCCGGGCTTCAACATGACCAGCCTGGCCCTGCGGGGGTCGCGCTTTC ACAACGGCGTCAGCCGGATCCACGGCCGCGTGGCCTCGGAGATGGAGGCCCGCATATGGCCGGATGTCCCGGCTCAACAG AACCCCATCCACTCCATCACCAACGGCGTCCATGTGCCGACCTTCCTCGCCCAGGAGTGGGGCAACCTCTTCGATCAGCG CTGGCCGGCCTGGCGGAGTGAGCTGAGCAATGAGGCGTTTTGGAGCGTCGTCGACGAACTGCCCGACCATCGCTACTGGA GCATGCGCCAGAGCCTGAAGTCGCAGATGCTCCGCGATGTCTGTGCCCGGGTCGAGGCCCGATGCAAGCGCAACGGCATG GCCGAGGCCATGATCCGCCGCATGACCCGCTATATCCGTGATCCCGAGGCCGATGTGCTGGTGCTCGGCTTCGCCCGCCG CTTCGCGACCTACAAGCGGGCTCTGCTGATCTTCCGCGACCTGGACCGGCTCAAGCAGCTGCTCAACGACCCCGAGCGGC CGATGATCCTGATCTTTGCCGGCAAGGCGCATCCGCACGACGAGCAGGGTCAGGCGATGATCCAGCGCATCCACGAGCTG ACCCTGGATCCCGATCTGATCGGCCGGCTGCTGCTGCTCGAGAACTACGACATGGCGCTGGCCCGCAAGCTGGTGACCGG GGTTGATGTGTGGCTGAACAACCCGGAGTACCCCCTCGAGGCGTGCGGGACGTCCGGCCAGAAGGCGGCCATCAACGGCG TGATCAACCTCTCGGTCCTGGACGGCTGGTGGGACGAGGGCTACGCCGGCGATAACGGTTGGGCCATCTACCCCCACGCC CCGGGGTTCGATCCGGATTACCGCGACGGTGAGGAGGCCCGGGACCTCCTGGATACGCTGGCCGGCGAGGTGGCGCCGCT CTACTACGATCGCGGCGAGCGTGGCTATTCGGCCGGCTGGGTGCAGATGTCCAAGGCGTCGATGCGCAGCACGTTGCCCC GCTTCAATGCCCAGCGCATGGTCATGGACTATGTGCGCGACCTCTACGGCCCGGCCGCCCGGCAGCAAAGGCGTCTGGCG GAGGAAGAGCTGGCGGGGGCGGCCGGGCTGGCGGCGTGGAAGGAGCACGTCCTGGCCTGCTGGGACGGGACGGCCCTGGA GCTGGTCGACGACGCCCCTGCCAGTCTGTATCACGGCGAGTCCCTGCGCCTGCGGGTCAAGGCGCAGCTCAATGGCCTCC GGGCCGAGGATGTCACCGTCGAGTGCCGTTTCAGCCCGGTGCCCCACCCGCGGGATCCGGCCCGGACCCAGCGGTTCGTC CTCTCGGCCACGGACCAGGATGACGCCGGGGATCCGCTCTTCACCCTCGACATCCAGCCACGGCTCAACGGCCTGCAGTA CTTCCGCATCTGCATGTATCCCAGCCACCCGCTGCTCGCGCACCCGCTGGAGCTGGGGCGGATGCGTTGGCTCTAG
Upstream 100 bases:
>100_bases CCCCCGGCGGGCCTTTCTCGTTGCGGGGGTGGTGTTCGAGCGTGTGTGCCCCCGCAACCTGTGCTAAACAGGGGGGTCTA CAGAGGGAGTTGCCCCACCC
Downstream 100 bases:
>100_bases GCCTCCGACGGGGCCTAGAGCCGGCCGTAGAGCCGGTTGAGGTCGTACAGCTGCCCGGCCAGGGAGTCGGGCAGCCACTC CCAAGCAAAGCGCCAGCGCC
Product: alpha-glucan phosphorylases
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 851; Mature: 850
Protein sequence:
>851_residues MSERVFTLEVHPNLPPSLGRLRELVDDLYYSWDRRVRGLFYQIDPECWEASGHNPKVFLRRVSQEALERAAQDPTFIEDY NRTLSAYDTYLEQETSPEVTPHLDPGQDLVAYFCAEFGLHESLPLYSGGLGILAGDHCKAASDLRVPLVAVGLLYRQGYF IQTIDHEGCQVAHYVPTEVAQLPAYPRQDGDGEELRVFVELPGRTVQLRIWSVRAGHVRLYMLDSDVPENRPEDRSITYQ LYGGGSEMRIKQELCLGIGGVRALRKLGVMPTVWHLNEGHSAFQLVERCREWVAAGTDFATALEVVAGTSVFTTHTPVAA GHDIFDPEMVREYLDAALGESGLDLDALLELGNGRAEHPGFNMTSLALRGSRFHNGVSRIHGRVASEMEARIWPDVPAQQ NPIHSITNGVHVPTFLAQEWGNLFDQRWPAWRSELSNEAFWSVVDELPDHRYWSMRQSLKSQMLRDVCARVEARCKRNGM AEAMIRRMTRYIRDPEADVLVLGFARRFATYKRALLIFRDLDRLKQLLNDPERPMILIFAGKAHPHDEQGQAMIQRIHEL TLDPDLIGRLLLLENYDMALARKLVTGVDVWLNNPEYPLEACGTSGQKAAINGVINLSVLDGWWDEGYAGDNGWAIYPHA PGFDPDYRDGEEARDLLDTLAGEVAPLYYDRGERGYSAGWVQMSKASMRSTLPRFNAQRMVMDYVRDLYGPAARQQRRLA EEELAGAAGLAAWKEHVLACWDGTALELVDDAPASLYHGESLRLRVKAQLNGLRAEDVTVECRFSPVPHPRDPARTQRFV LSATDQDDAGDPLFTLDIQPRLNGLQYFRICMYPSHPLLAHPLELGRMRWL
Sequences:
>Translated_851_residues MSERVFTLEVHPNLPPSLGRLRELVDDLYYSWDRRVRGLFYQIDPECWEASGHNPKVFLRRVSQEALERAAQDPTFIEDY NRTLSAYDTYLEQETSPEVTPHLDPGQDLVAYFCAEFGLHESLPLYSGGLGILAGDHCKAASDLRVPLVAVGLLYRQGYF IQTIDHEGCQVAHYVPTEVAQLPAYPRQDGDGEELRVFVELPGRTVQLRIWSVRAGHVRLYMLDSDVPENRPEDRSITYQ LYGGGSEMRIKQELCLGIGGVRALRKLGVMPTVWHLNEGHSAFQLVERCREWVAAGTDFATALEVVAGTSVFTTHTPVAA GHDIFDPEMVREYLDAALGESGLDLDALLELGNGRAEHPGFNMTSLALRGSRFHNGVSRIHGRVASEMEARIWPDVPAQQ NPIHSITNGVHVPTFLAQEWGNLFDQRWPAWRSELSNEAFWSVVDELPDHRYWSMRQSLKSQMLRDVCARVEARCKRNGM AEAMIRRMTRYIRDPEADVLVLGFARRFATYKRALLIFRDLDRLKQLLNDPERPMILIFAGKAHPHDEQGQAMIQRIHEL TLDPDLIGRLLLLENYDMALARKLVTGVDVWLNNPEYPLEACGTSGQKAAINGVINLSVLDGWWDEGYAGDNGWAIYPHA PGFDPDYRDGEEARDLLDTLAGEVAPLYYDRGERGYSAGWVQMSKASMRSTLPRFNAQRMVMDYVRDLYGPAARQQRRLA EEELAGAAGLAAWKEHVLACWDGTALELVDDAPASLYHGESLRLRVKAQLNGLRAEDVTVECRFSPVPHPRDPARTQRFV LSATDQDDAGDPLFTLDIQPRLNGLQYFRICMYPSHPLLAHPLELGRMRWL >Mature_850_residues SERVFTLEVHPNLPPSLGRLRELVDDLYYSWDRRVRGLFYQIDPECWEASGHNPKVFLRRVSQEALERAAQDPTFIEDYN RTLSAYDTYLEQETSPEVTPHLDPGQDLVAYFCAEFGLHESLPLYSGGLGILAGDHCKAASDLRVPLVAVGLLYRQGYFI QTIDHEGCQVAHYVPTEVAQLPAYPRQDGDGEELRVFVELPGRTVQLRIWSVRAGHVRLYMLDSDVPENRPEDRSITYQL YGGGSEMRIKQELCLGIGGVRALRKLGVMPTVWHLNEGHSAFQLVERCREWVAAGTDFATALEVVAGTSVFTTHTPVAAG HDIFDPEMVREYLDAALGESGLDLDALLELGNGRAEHPGFNMTSLALRGSRFHNGVSRIHGRVASEMEARIWPDVPAQQN PIHSITNGVHVPTFLAQEWGNLFDQRWPAWRSELSNEAFWSVVDELPDHRYWSMRQSLKSQMLRDVCARVEARCKRNGMA EAMIRRMTRYIRDPEADVLVLGFARRFATYKRALLIFRDLDRLKQLLNDPERPMILIFAGKAHPHDEQGQAMIQRIHELT LDPDLIGRLLLLENYDMALARKLVTGVDVWLNNPEYPLEACGTSGQKAAINGVINLSVLDGWWDEGYAGDNGWAIYPHAP GFDPDYRDGEEARDLLDTLAGEVAPLYYDRGERGYSAGWVQMSKASMRSTLPRFNAQRMVMDYVRDLYGPAARQQRRLAE EELAGAAGLAAWKEHVLACWDGTALELVDDAPASLYHGESLRLRVKAQLNGLRAEDVTVECRFSPVPHPRDPARTQRFVL SATDQDDAGDPLFTLDIQPRLNGLQYFRICMYPSHPLLAHPLELGRMRWL
Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [
COG id: COG0058
COG function: function code G; Glucan phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycogen phosphorylase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011834 - InterPro: IPR000811 [H]
Pfam domain/function: PF00343 Phosphorylase [H]
EC number: =2.4.1.1 [H]
Molecular weight: Translated: 96236; Mature: 96105
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSERVFTLEVHPNLPPSLGRLRELVDDLYYSWDRRVRGLFYQIDPECWEASGHNPKVFLR CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHCCCCCCHHHHHH RVSQEALERAAQDPTFIEDYNRTLSAYDTYLEQETSPEVTPHLDPGQDLVAYFCAEFGLH HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCC ESLPLYSGGLGILAGDHCKAASDLRVPLVAVGLLYRQGYFIQTIDHEGCQVAHYVPTEVA CCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCEEEEECCHHHH QLPAYPRQDGDGEELRVFVELPGRTVQLRIWSVRAGHVRLYMLDSDVPENRPEDRSITYQ HCCCCCCCCCCCCEEEEEEECCCCEEEEEEEEEEECEEEEEEECCCCCCCCCCCCCEEEE LYGGGSEMRIKQELCLGIGGVRALRKLGVMPTVWHLNEGHSAFQLVERCREWVAAGTDFA EECCCCCEEEHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCHHH TALEVVAGTSVFTTHTPVAAGHDIFDPEMVREYLDAALGESGLDLDALLELGNGRAEHPG HHHHHHHCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCC FNMTSLALRGSRFHNGVSRIHGRVASEMEARIWPDVPAQQNPIHSITNGVHVPTFLAQEW CCHHHHEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCHHHHHHHH GNLFDQRWPAWRSELSNEAFWSVVDELPDHRYWSMRQSLKSQMLRDVCARVEARCKRNGM HHHHHHCCCHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH AEAMIRRMTRYIRDPEADVLVLGFARRFATYKRALLIFRDLDRLKQLLNDPERPMILIFA HHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE GKAHPHDEQGQAMIQRIHELTLDPDLIGRLLLLENYDMALARKLVTGVDVWLNNPEYPLE CCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHEEECCCCCCHH ACGTSGQKAAINGVINLSVLDGWWDEGYAGDNGWAIYPHAPGFDPDYRDGEEARDLLDTL HCCCCCCCEEECEEEEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHH AGEVAPLYYDRGERGYSAGWVQMSKASMRSTLPRFNAQRMVMDYVRDLYGPAARQQRRLA HHHHEEHEECCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHH EEELAGAAGLAAWKEHVLACWDGTALELVDDAPASLYHGESLRLRVKAQLNGLRAEDVTV HHHHHCHHHHHHHHHHEEEECCCCEEEEECCCCCHHCCCCCEEEEEEEECCCCCCCCEEE ECRFSPVPHPRDPARTQRFVLSATDQDDAGDPLFTLDIQPRLNGLQYFRICMYPSHPLLA EEEECCCCCCCCCHHHHEEEEEECCCCCCCCCEEEEECCCCCCCEEEEEEEECCCCCCHH HPLELGRMRWL CCHHHHHCCCC >Mature Secondary Structure SERVFTLEVHPNLPPSLGRLRELVDDLYYSWDRRVRGLFYQIDPECWEASGHNPKVFLR CCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHCCCCCCHHHHHH RVSQEALERAAQDPTFIEDYNRTLSAYDTYLEQETSPEVTPHLDPGQDLVAYFCAEFGLH HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCC ESLPLYSGGLGILAGDHCKAASDLRVPLVAVGLLYRQGYFIQTIDHEGCQVAHYVPTEVA CCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCEEEEECCHHHH QLPAYPRQDGDGEELRVFVELPGRTVQLRIWSVRAGHVRLYMLDSDVPENRPEDRSITYQ HCCCCCCCCCCCCEEEEEEECCCCEEEEEEEEEEECEEEEEEECCCCCCCCCCCCCEEEE LYGGGSEMRIKQELCLGIGGVRALRKLGVMPTVWHLNEGHSAFQLVERCREWVAAGTDFA EECCCCCEEEHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCHHH TALEVVAGTSVFTTHTPVAAGHDIFDPEMVREYLDAALGESGLDLDALLELGNGRAEHPG HHHHHHHCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCC FNMTSLALRGSRFHNGVSRIHGRVASEMEARIWPDVPAQQNPIHSITNGVHVPTFLAQEW CCHHHHEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCHHHHHHHH GNLFDQRWPAWRSELSNEAFWSVVDELPDHRYWSMRQSLKSQMLRDVCARVEARCKRNGM HHHHHHCCCHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH AEAMIRRMTRYIRDPEADVLVLGFARRFATYKRALLIFRDLDRLKQLLNDPERPMILIFA HHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE GKAHPHDEQGQAMIQRIHELTLDPDLIGRLLLLENYDMALARKLVTGVDVWLNNPEYPLE CCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHEEECCCCCCHH ACGTSGQKAAINGVINLSVLDGWWDEGYAGDNGWAIYPHAPGFDPDYRDGEEARDLLDTL HCCCCCCCEEECEEEEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHH AGEVAPLYYDRGERGYSAGWVQMSKASMRSTLPRFNAQRMVMDYVRDLYGPAARQQRRLA HHHHEEHEECCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHH EEELAGAAGLAAWKEHVLACWDGTALELVDDAPASLYHGESLRLRVKAQLNGLRAEDVTV HHHHHCHHHHHHHHHHEEEECCCCEEEEECCCCCHHCCCCCEEEEEEEECCCCCCCCEEE ECRFSPVPHPRDPARTQRFVLSATDQDDAGDPLFTLDIQPRLNGLQYFRICMYPSHPLLA EEEECCCCCCCCCHHHHEEEEEECCCCCCCCCEEEEECCCCCCCEEEEEEEECCCCCCHH HPLELGRMRWL CCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]