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The map label for this gene is glgB [H]

Identifier: 121997896

GI number: 121997896

Start: 1199010

End: 1201256

Strand: Reverse

Name: glgB [H]

Synonym: Hhal_1105

Alternate gene names: 121997896

Gene position: 1201256-1199010 (Counterclockwise)

Preceding gene: 121997900

Following gene: 121997895

Centisome position: 44.85

GC content: 69.69

Gene sequence:

>2247_bases
ATGGGCGGCCCATCCGGGGCGAGCGGCACCGCAGCGGCGCCTGAGCGGAGGTCAGGCTTGAATCGCGTTAGCCAACAGCG
CGCCGAGGCCGAAGAGCGCCAGCGGATCGCCGAGGGGCGCCACTCGGATCCCTTCGCCTACCTCGGCGGCCCCCACGGCC
CGAGCCGGCGGGTGCGCATCTACCACCCGGAGGCGGCGGCAGTGGCCTTTAGCGAGGGCACCGAGGTGCCGCGCGTTGCC
GGCACCGACTTCTTCGAGGCGCCGCTGCCCGAGGCCCTTGAGGCGCCGTACCAGGTCTGCTGGCGGGATGCCGGGGGTGC
CTGGCACACCGCCTACGACCCTTACGCCTTCCCGCCGGTGCTCTCGGAGTTCGACCTGCACCTCTACGCCGAGGGGCGGC
ACTGGCACGCTCAGCGCTTCCTGGGGGCGCACTGCACCACGGTTGACGGGGTGGCAGGCGTGGTCTTTTCGGTTTGGGCG
CCCAACGCCGAGCGGGTCAGCGTGGTGGGGGATTTCAATCGCTGGGATGGGCGCCGCCACCCCATGCGCCTGCGCCTGGA
GGCCGGGGTCTGGGAGCTGTTTATCCCCGGGGTGGAGCCGGGGGCCCTGTACAAGTTTGAGCTGCGGGGAGCCGGCGGCT
GCGGGCCGCTGCTCAAGACCGACCCCTGTGGCCGGCGCTACCAGCACCGGCCCGAGACCGCCGCCGTGGTGGAGCCGCCC
GAGGCCTACCCCTGGGGGGATGATGCGTGGATGGAGCGCCGCCGGCGCGAGGGGAGCGCCTGGCAGCAGGCACCGTGGTC
GATCTACGAGGTGCATCTGGGCTCCTGGCAGCGGGATGTCGGGGGGGGGTTCCTCGACTACCGCACCCTGGCCCACGAGC
TGGTCGACTACGTCCAGCGCACGGGCTTCACCCACATCGAGCTGCTGCCGATCACTGAGCACCCGTTGGACGACTCCTGG
GGGTATCAGGCCACCGGCTACTTCGCCCCGACCAGTCGGTTCGGCGAGCCGGACGCGTTTCGCTACTTCGTGGACTACTG
CCACCGCCACGGTATCGGCGTGATCCTGGACTGGGTACCGGCTCACTTTCCCCGGGACGCATGGGCCCTGGCCCGTTTCG
ACGGTACGCCGCTCTACGAGCACGCTGATCCCCGGCAGGGCGAGCACCGCGACTGGGGGACGCTGATCTTCAACTTCGGT
CGTAACGAGGTGCGCAGCTTCCTGCTCTCCAGCGCCCTCTACTGGCTGGAGGCCTACCACCTGGACGGGCTCCGGGTGGA
TGCGGTCGCCTCGATGCTCTACCTGAACTACTCCCGCGAAGACGGGGACTGGGTGCCGAACATCCACGGCGGCAACGAGA
ACCTGGAGGCCATTGCCTTCCTGCGCGAGGTGAACACCGTCACCCACGGCGAGCAGCCGGGGACCTGCATCATCGCCGAG
GAGTCCACCTCCTGGCCCCAGGTCACGCGGCCCACCTACCTCGGTGGGTTGGGGTTCACCATGAAGTGGAACATGGGCTG
GATGCACGACACCCTGACCTACCTCGGCGAGGACCCCGTCCATCGCCGCTACCACCACGACCAGCTGACCTTCGGCCTGC
TCTACGCCTTTACCGAGAACTTCGTCCTGCCGTTCAGTCACGACGAGGTGGTCCACGGCAAGGGCAGCCTGCTCGACCGC
ATGCCCGGCGACGACTGGCAGCGCCTGGCGAACCTGCGCCTGCTCTACGCCTACCAGTTCACCTACCCGGGCAAGAAGCT
GCTGTTCATGGGCTGCGAGATCGGCCAGCGCAGCGAGTGGGACGCCGATGCCACGGTGGACTGGGCGGCCCTGTCCGACC
CGCGCCACGCCGGCGTGCAGCGTCTGGTCAGTGATCTCAATGCGCTCTACCGTGGCGTGCCGGCCCTCCACCGCTACGAC
TTCGCCGAGGCGGGTTTCGCCTGGGTGGATTGCCACGACGCCGAGCAGTCGGTACTCAGCTACCTGCGCCGCGGCGATGC
CGGGGAGCAGGCGCTGGTGGTCCTGAACTTTACGCCGGTCCCCCGCCACGGCCACCGGCTGGGCGTGCCGGCCCCCGGGC
GCTGGACAGAGCGGATGAACACCGACTCGGCTTACTACGGCGGATCGGACCTGGGCAATGCCGGCGGTGTGCTCGCCGAG
CCGGTGCCGTGGAGTGGCTACCCCTACTCAGTGACCCTGACCCTGCCACCGCTGGCCGGCCTGGTGCTGGTCGGGGAGGG
GGCGTGA

Upstream 100 bases:

>100_bases
GGGGGGAGCGCTGGGGTAACACGTCGGGTCTTCCTGACAACTGGGGCTTTGGGAGCAGTATGGACGCCTTTTCCGCGGAT
CGACAGGGTATTCACCACCG

Downstream 100 bases:

>100_bases
GGGTCCTCTTCGCCACCGCCGAGGCGTGGCCCCTGGCCAAGACGGGCGGCCTGGGCGATGTGGCCTTCGGCCTGACTCGG
GCCCTGGCTGAGCTCGACTG

Product: glycogen branching enzyme

Products: NA

Alternate protein names: 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase; Glycogen-branching enzyme; BE [H]

Number of amino acids: Translated: 748; Mature: 747

Protein sequence:

>748_residues
MGGPSGASGTAAAPERRSGLNRVSQQRAEAEERQRIAEGRHSDPFAYLGGPHGPSRRVRIYHPEAAAVAFSEGTEVPRVA
GTDFFEAPLPEALEAPYQVCWRDAGGAWHTAYDPYAFPPVLSEFDLHLYAEGRHWHAQRFLGAHCTTVDGVAGVVFSVWA
PNAERVSVVGDFNRWDGRRHPMRLRLEAGVWELFIPGVEPGALYKFELRGAGGCGPLLKTDPCGRRYQHRPETAAVVEPP
EAYPWGDDAWMERRRREGSAWQQAPWSIYEVHLGSWQRDVGGGFLDYRTLAHELVDYVQRTGFTHIELLPITEHPLDDSW
GYQATGYFAPTSRFGEPDAFRYFVDYCHRHGIGVILDWVPAHFPRDAWALARFDGTPLYEHADPRQGEHRDWGTLIFNFG
RNEVRSFLLSSALYWLEAYHLDGLRVDAVASMLYLNYSREDGDWVPNIHGGNENLEAIAFLREVNTVTHGEQPGTCIIAE
ESTSWPQVTRPTYLGGLGFTMKWNMGWMHDTLTYLGEDPVHRRYHHDQLTFGLLYAFTENFVLPFSHDEVVHGKGSLLDR
MPGDDWQRLANLRLLYAYQFTYPGKKLLFMGCEIGQRSEWDADATVDWAALSDPRHAGVQRLVSDLNALYRGVPALHRYD
FAEAGFAWVDCHDAEQSVLSYLRRGDAGEQALVVLNFTPVPRHGHRLGVPAPGRWTERMNTDSAYYGGSDLGNAGGVLAE
PVPWSGYPYSVTLTLPPLAGLVLVGEGA

Sequences:

>Translated_748_residues
MGGPSGASGTAAAPERRSGLNRVSQQRAEAEERQRIAEGRHSDPFAYLGGPHGPSRRVRIYHPEAAAVAFSEGTEVPRVA
GTDFFEAPLPEALEAPYQVCWRDAGGAWHTAYDPYAFPPVLSEFDLHLYAEGRHWHAQRFLGAHCTTVDGVAGVVFSVWA
PNAERVSVVGDFNRWDGRRHPMRLRLEAGVWELFIPGVEPGALYKFELRGAGGCGPLLKTDPCGRRYQHRPETAAVVEPP
EAYPWGDDAWMERRRREGSAWQQAPWSIYEVHLGSWQRDVGGGFLDYRTLAHELVDYVQRTGFTHIELLPITEHPLDDSW
GYQATGYFAPTSRFGEPDAFRYFVDYCHRHGIGVILDWVPAHFPRDAWALARFDGTPLYEHADPRQGEHRDWGTLIFNFG
RNEVRSFLLSSALYWLEAYHLDGLRVDAVASMLYLNYSREDGDWVPNIHGGNENLEAIAFLREVNTVTHGEQPGTCIIAE
ESTSWPQVTRPTYLGGLGFTMKWNMGWMHDTLTYLGEDPVHRRYHHDQLTFGLLYAFTENFVLPFSHDEVVHGKGSLLDR
MPGDDWQRLANLRLLYAYQFTYPGKKLLFMGCEIGQRSEWDADATVDWAALSDPRHAGVQRLVSDLNALYRGVPALHRYD
FAEAGFAWVDCHDAEQSVLSYLRRGDAGEQALVVLNFTPVPRHGHRLGVPAPGRWTERMNTDSAYYGGSDLGNAGGVLAE
PVPWSGYPYSVTLTLPPLAGLVLVGEGA
>Mature_747_residues
GGPSGASGTAAAPERRSGLNRVSQQRAEAEERQRIAEGRHSDPFAYLGGPHGPSRRVRIYHPEAAAVAFSEGTEVPRVAG
TDFFEAPLPEALEAPYQVCWRDAGGAWHTAYDPYAFPPVLSEFDLHLYAEGRHWHAQRFLGAHCTTVDGVAGVVFSVWAP
NAERVSVVGDFNRWDGRRHPMRLRLEAGVWELFIPGVEPGALYKFELRGAGGCGPLLKTDPCGRRYQHRPETAAVVEPPE
AYPWGDDAWMERRRREGSAWQQAPWSIYEVHLGSWQRDVGGGFLDYRTLAHELVDYVQRTGFTHIELLPITEHPLDDSWG
YQATGYFAPTSRFGEPDAFRYFVDYCHRHGIGVILDWVPAHFPRDAWALARFDGTPLYEHADPRQGEHRDWGTLIFNFGR
NEVRSFLLSSALYWLEAYHLDGLRVDAVASMLYLNYSREDGDWVPNIHGGNENLEAIAFLREVNTVTHGEQPGTCIIAEE
STSWPQVTRPTYLGGLGFTMKWNMGWMHDTLTYLGEDPVHRRYHHDQLTFGLLYAFTENFVLPFSHDEVVHGKGSLLDRM
PGDDWQRLANLRLLYAYQFTYPGKKLLFMGCEIGQRSEWDADATVDWAALSDPRHAGVQRLVSDLNALYRGVPALHRYDF
AEAGFAWVDCHDAEQSVLSYLRRGDAGEQALVVLNFTPVPRHGHRLGVPAPGRWTERMNTDSAYYGGSDLGNAGGVLAEP
VPWSGYPYSVTLTLPPLAGLVLVGEGA

Specific function: Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position [H]

COG id: COG0296

COG function: function code G; 1,4-alpha-glucan branching enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Homo sapiens, GI189458812, Length=649, Percent_Identity=29.1217257318952, Blast_Score=171, Evalue=2e-42,
Organism=Escherichia coli, GI1789839, Length=735, Percent_Identity=51.9727891156463, Blast_Score=723, Evalue=0.0,
Organism=Escherichia coli, GI2367229, Length=349, Percent_Identity=27.7936962750716, Blast_Score=67, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17554896, Length=605, Percent_Identity=25.9504132231405, Blast_Score=166, Evalue=4e-41,
Organism=Caenorhabditis elegans, GI32564391, Length=515, Percent_Identity=26.4077669902913, Blast_Score=144, Evalue=1e-34,
Organism=Saccharomyces cerevisiae, GI6320826, Length=652, Percent_Identity=25.3067484662577, Blast_Score=161, Evalue=4e-40,
Organism=Drosophila melanogaster, GI28573410, Length=610, Percent_Identity=28.0327868852459, Blast_Score=181, Evalue=2e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006407
- InterPro:   IPR006048
- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR004193
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783
- InterPro:   IPR014756 [H]

Pfam domain/function: PF00128 Alpha-amylase; PF02806 Alpha-amylase_C; PF02922 CBM_48 [H]

EC number: =2.4.1.18 [H]

Molecular weight: Translated: 83946; Mature: 83815

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGPSGASGTAAAPERRSGLNRVSQQRAEAEERQRIAEGRHSDPFAYLGGPHGPSRRVRI
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCEEE
YHPEAAAVAFSEGTEVPRVAGTDFFEAPLPEALEAPYQVCWRDAGGAWHTAYDPYAFPPV
ECCCHHEEEECCCCCCCCCCCCCCCCCCCCHHHHCCHHHHEECCCCCCCCCCCCCCCCCH
LSEFDLHLYAEGRHWHAQRFLGAHCTTVDGVAGVVFSVWAPNAERVSVVGDFNRWDGRRH
HHCCCEEEEECCCCCHHHHHHCCCCCCHHHHHHHHHEEECCCCCEEEEEECCHHCCCCCC
PMRLRLEAGVWELFIPGVEPGALYKFELRGAGGCGPLLKTDPCGRRYQHRPETAAVVEPP
CEEEEEECCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC
EAYPWGDDAWMERRRREGSAWQQAPWSIYEVHLGSWQRDVGGGFLDYRTLAHELVDYVQR
CCCCCCCHHHHHHHHHCCCCHHCCCCEEEEEECCCCCHHHCCCHHHHHHHHHHHHHHHHH
TGFTHIELLPITEHPLDDSWGYQATGYFAPTSRFGEPDAFRYFVDYCHRHGIGVILDWVP
CCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEECCC
AHFPRDAWALARFDGTPLYEHADPRQGEHRDWGTLIFNFGRNEVRSFLLSSALYWLEAYH
CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHC
LDGLRVDAVASMLYLNYSREDGDWVPNIHGGNENLEAIAFLREVNTVTHGEQPGTCIIAE
CCCCCHHHHHHHHHEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEE
ESTSWPQVTRPTYLGGLGFTMKWNMGWMHDTLTYLGEDPVHRRYHHDQLTFGLLYAFTEN
CCCCCCCCCCCCEECCCCEEEEECCCHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHCC
FVLPFSHDEVVHGKGSLLDRMPGDDWQRLANLRLLYAYQFTYPGKKLLFMGCEIGQRSEW
CEEECCCCCEECCCCCHHHCCCCHHHHHHHCEEEEEEEEEECCCCEEEEEECCCCCCCCC
DADATVDWAALSDPRHAGVQRLVSDLNALYRGVPALHRYDFAEAGFAWVDCHDAEQSVLS
CCCCEEEEHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCHHHCCEEEEECCCHHHHHHH
YLRRGDAGEQALVVLNFTPVPRHGHRLGVPAPGRWTERMNTDSAYYGGSDLGNAGGVLAE
HHHCCCCCCCEEEEEEECCCCCCCCEECCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCC
PVPWSGYPYSVTLTLPPLAGLVLVGEGA
CCCCCCCCEEEEEEECCCCCEEEEECCC
>Mature Secondary Structure 
GGPSGASGTAAAPERRSGLNRVSQQRAEAEERQRIAEGRHSDPFAYLGGPHGPSRRVRI
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCEEE
YHPEAAAVAFSEGTEVPRVAGTDFFEAPLPEALEAPYQVCWRDAGGAWHTAYDPYAFPPV
ECCCHHEEEECCCCCCCCCCCCCCCCCCCCHHHHCCHHHHEECCCCCCCCCCCCCCCCCH
LSEFDLHLYAEGRHWHAQRFLGAHCTTVDGVAGVVFSVWAPNAERVSVVGDFNRWDGRRH
HHCCCEEEEECCCCCHHHHHHCCCCCCHHHHHHHHHEEECCCCCEEEEEECCHHCCCCCC
PMRLRLEAGVWELFIPGVEPGALYKFELRGAGGCGPLLKTDPCGRRYQHRPETAAVVEPP
CEEEEEECCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC
EAYPWGDDAWMERRRREGSAWQQAPWSIYEVHLGSWQRDVGGGFLDYRTLAHELVDYVQR
CCCCCCCHHHHHHHHHCCCCHHCCCCEEEEEECCCCCHHHCCCHHHHHHHHHHHHHHHHH
TGFTHIELLPITEHPLDDSWGYQATGYFAPTSRFGEPDAFRYFVDYCHRHGIGVILDWVP
CCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEECCC
AHFPRDAWALARFDGTPLYEHADPRQGEHRDWGTLIFNFGRNEVRSFLLSSALYWLEAYH
CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHC
LDGLRVDAVASMLYLNYSREDGDWVPNIHGGNENLEAIAFLREVNTVTHGEQPGTCIIAE
CCCCCHHHHHHHHHEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEE
ESTSWPQVTRPTYLGGLGFTMKWNMGWMHDTLTYLGEDPVHRRYHHDQLTFGLLYAFTEN
CCCCCCCCCCCCEECCCCEEEEECCCHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHCC
FVLPFSHDEVVHGKGSLLDRMPGDDWQRLANLRLLYAYQFTYPGKKLLFMGCEIGQRSEW
CEEECCCCCEECCCCCHHHCCCCHHHHHHHCEEEEEEEEEECCCCEEEEEECCCCCCCCC
DADATVDWAALSDPRHAGVQRLVSDLNALYRGVPALHRYDFAEAGFAWVDCHDAEQSVLS
CCCCEEEEHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCHHHCCEEEEECCCHHHHHHH
YLRRGDAGEQALVVLNFTPVPRHGHRLGVPAPGRWTERMNTDSAYYGGSDLGNAGGVLAE
HHHCCCCCCCEEEEEEECCCCCCCCEECCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCC
PVPWSGYPYSVTLTLPPLAGLVLVGEGA
CCCCCCCCEEEEEEECCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA