| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is pykA [H]
Identifier: 121997831
GI number: 121997831
Start: 1122884
End: 1124320
Strand: Reverse
Name: pykA [H]
Synonym: Hhal_1040
Alternate gene names: 121997831
Gene position: 1124320-1122884 (Counterclockwise)
Preceding gene: 121997832
Following gene: 121997830
Centisome position: 41.98
GC content: 70.56
Gene sequence:
>1437_bases ATGATGCCCCGCAGAACCAAGATCCTGGCGACCCTCGGGCCGGCGACGGATCGCCCCGAAGGGCTGGAGGCGGTCCTCGC CGCCGGGGTGGATGTGGTCCGCATCAACCTCTCCCACGGCGAGGCCAGCGACCACCGCCGGCGGGTCGAGGCCGTCCGGA CCTGGGGCGAAGCCCACGGCCGGCGGGTGGGCGTGCTGGTGGACCTGCAGGGGCCGAAGATCCGGATTGAGCGCTTTCGC AATGGCCCGGTCCTCCTGCGCCGCGGGGACCCCTTCATCCTCGATCCTACCGTGGATCCCGATGCCGGGGACCAGACGCA GGTCGGGGTCGCCTACCGGGCCCTGCCCGACGACCTGCACCCCGGCGACGAGCTGCTGCTCGACGACGGCCGCCTGGTGG TGCGGGTCGAACGCATCGAGGGGACCGCGGTGCACACCAGCGTGCAGGTCGGCGGTGAACTCAGCGATCGCAAGGGCATC AACCGCCGCGGTGGCGGGCTTTCGGCGCCGGCGCTCACCGACAAGGACCGGGTCGACATCGTCACCGCCGCCGAACTGGC CGCCGACTACGTGGCGGTGTCGTTCCCGCGGTGTGCGGACGATATCCACGAGGCCCGCCGGCTGCTGACCGAGGCCGGTG GGCGGTCCGGGATCGTGGCCAAGATCGAGCGGGCCGAGGCCCTGGACGCCGCCGAGGAGATCATGGATGCCGCCGACGCC ATCATGGTCGCCCGCGGCGATCTCGGCGTGGAGATCGGCGACGCCGCCCTGCCCGAGGTTCAGAAGCAGCTCATCCAGAC CGCCCGGGCCCGGAACCGGGTCGCCATCACGGCGACCCAGATGATGGAGTCGATGATCGACAATCCCATCCCCACCCGGG CCGAGGTCTTCGACGTTGCCAACGCCGTGCGGGATGGCACCGACGCCGTGATGCTCTCGGCAGAGACCGCCACCGGCTCG TTCCCGGCCGAGACCGTGGCCGCCATGGACCGCGTCTGCCGGGCCGCCGAGCGCAGCCGTACGGTGACGGTCTCCCACCA CCGGCTGGACGAGCACTTCACGCAGGTCGACGAGACGGTGGCCATGGCGGCGATGTACGCCGCCAACCACTTCGCCATCA AGGCGCTGATCGCCATCACCGAGTCCGGAGGGACGGCCTCGTGGATGTCGCGGATCAGCTCCGGGCTGCCGATCTACGTC CTCACCCGCCACCCGGAGACCCGGGGCCGGGTCACCCTCTACCGTGGCGTCTACCCGCTGGAGTTCGATGCCGAGCAGGA GGACCTCAACGCCCTCAAGAGTCGGCTGCTGGCCCGTCTCTCCAAGCAAGGGCTGGTCAGCCAGGGGGACTACGTCCTGG TGACCCACGGCGAGGAGCTCGGCGCCGCAGGGGGCACGAACACGTTGCGCATCGTCTGCGTGGACGATTATCTCTAG
Upstream 100 bases:
>100_bases AGTTCCTCGAGGGGCGCGTTCTGCCCGGCGTTGCGGCCCTGGAGCAGCACGCGGCAGCGCACTCGTGATCGACGCGGTAA TCAGGCAGGGAGCCGGTGGC
Downstream 100 bases:
>100_bases AGTGAATGCATAGATAGCGGAGGAGTCGAAACTATGGCGATGATCACCCTGCGACAGCTGCTCGATCACGCAGCCGAGCA CGGCTACGGCATGCCGGCGT
Product: pyruvate kinase
Products: NA
Alternate protein names: PK-2 [H]
Number of amino acids: Translated: 478; Mature: 478
Protein sequence:
>478_residues MMPRRTKILATLGPATDRPEGLEAVLAAGVDVVRINLSHGEASDHRRRVEAVRTWGEAHGRRVGVLVDLQGPKIRIERFR NGPVLLRRGDPFILDPTVDPDAGDQTQVGVAYRALPDDLHPGDELLLDDGRLVVRVERIEGTAVHTSVQVGGELSDRKGI NRRGGGLSAPALTDKDRVDIVTAAELAADYVAVSFPRCADDIHEARRLLTEAGGRSGIVAKIERAEALDAAEEIMDAADA IMVARGDLGVEIGDAALPEVQKQLIQTARARNRVAITATQMMESMIDNPIPTRAEVFDVANAVRDGTDAVMLSAETATGS FPAETVAAMDRVCRAAERSRTVTVSHHRLDEHFTQVDETVAMAAMYAANHFAIKALIAITESGGTASWMSRISSGLPIYV LTRHPETRGRVTLYRGVYPLEFDAEQEDLNALKSRLLARLSKQGLVSQGDYVLVTHGEELGAAGGTNTLRIVCVDDYL
Sequences:
>Translated_478_residues MMPRRTKILATLGPATDRPEGLEAVLAAGVDVVRINLSHGEASDHRRRVEAVRTWGEAHGRRVGVLVDLQGPKIRIERFR NGPVLLRRGDPFILDPTVDPDAGDQTQVGVAYRALPDDLHPGDELLLDDGRLVVRVERIEGTAVHTSVQVGGELSDRKGI NRRGGGLSAPALTDKDRVDIVTAAELAADYVAVSFPRCADDIHEARRLLTEAGGRSGIVAKIERAEALDAAEEIMDAADA IMVARGDLGVEIGDAALPEVQKQLIQTARARNRVAITATQMMESMIDNPIPTRAEVFDVANAVRDGTDAVMLSAETATGS FPAETVAAMDRVCRAAERSRTVTVSHHRLDEHFTQVDETVAMAAMYAANHFAIKALIAITESGGTASWMSRISSGLPIYV LTRHPETRGRVTLYRGVYPLEFDAEQEDLNALKSRLLARLSKQGLVSQGDYVLVTHGEELGAAGGTNTLRIVCVDDYL >Mature_478_residues MMPRRTKILATLGPATDRPEGLEAVLAAGVDVVRINLSHGEASDHRRRVEAVRTWGEAHGRRVGVLVDLQGPKIRIERFR NGPVLLRRGDPFILDPTVDPDAGDQTQVGVAYRALPDDLHPGDELLLDDGRLVVRVERIEGTAVHTSVQVGGELSDRKGI NRRGGGLSAPALTDKDRVDIVTAAELAADYVAVSFPRCADDIHEARRLLTEAGGRSGIVAKIERAEALDAAEEIMDAADA IMVARGDLGVEIGDAALPEVQKQLIQTARARNRVAITATQMMESMIDNPIPTRAEVFDVANAVRDGTDAVMLSAETATGS FPAETVAAMDRVCRAAERSRTVTVSHHRLDEHFTQVDETVAMAAMYAANHFAIKALIAITESGGTASWMSRISSGLPIYV LTRHPETRGRVTLYRGVYPLEFDAEQEDLNALKSRLLARLSKQGLVSQGDYVLVTHGEELGAAGGTNTLRIVCVDDYL
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyruvate kinase family [H]
Homologues:
Organism=Homo sapiens, GI33286422, Length=492, Percent_Identity=36.1788617886179, Blast_Score=265, Evalue=1e-70, Organism=Homo sapiens, GI33286420, Length=492, Percent_Identity=36.1788617886179, Blast_Score=265, Evalue=1e-70, Organism=Homo sapiens, GI33286418, Length=496, Percent_Identity=35.2822580645161, Blast_Score=257, Evalue=2e-68, Organism=Homo sapiens, GI10835121, Length=496, Percent_Identity=34.2741935483871, Blast_Score=236, Evalue=3e-62, Organism=Homo sapiens, GI32967597, Length=496, Percent_Identity=34.2741935483871, Blast_Score=236, Evalue=4e-62, Organism=Homo sapiens, GI310128732, Length=289, Percent_Identity=33.5640138408304, Blast_Score=145, Evalue=9e-35, Organism=Homo sapiens, GI310128730, Length=289, Percent_Identity=33.5640138408304, Blast_Score=145, Evalue=9e-35, Organism=Homo sapiens, GI310128736, Length=237, Percent_Identity=32.0675105485232, Blast_Score=116, Evalue=4e-26, Organism=Homo sapiens, GI310128734, Length=237, Percent_Identity=32.0675105485232, Blast_Score=116, Evalue=4e-26, Organism=Homo sapiens, GI310128738, Length=216, Percent_Identity=31.0185185185185, Blast_Score=100, Evalue=5e-21, Organism=Escherichia coli, GI1788160, Length=476, Percent_Identity=55.8823529411765, Blast_Score=513, Evalue=1e-146, Organism=Escherichia coli, GI1787965, Length=470, Percent_Identity=36.5957446808511, Blast_Score=276, Evalue=2e-75, Organism=Caenorhabditis elegans, GI17544584, Length=485, Percent_Identity=36.701030927835, Blast_Score=277, Evalue=9e-75, Organism=Caenorhabditis elegans, GI17506831, Length=489, Percent_Identity=36.1963190184049, Blast_Score=249, Evalue=3e-66, Organism=Caenorhabditis elegans, GI71984406, Length=489, Percent_Identity=36.1963190184049, Blast_Score=249, Evalue=3e-66, Organism=Caenorhabditis elegans, GI71984413, Length=489, Percent_Identity=36.1963190184049, Blast_Score=248, Evalue=4e-66, Organism=Caenorhabditis elegans, GI17506829, Length=489, Percent_Identity=36.1963190184049, Blast_Score=248, Evalue=5e-66, Organism=Saccharomyces cerevisiae, GI6319279, Length=484, Percent_Identity=33.8842975206612, Blast_Score=240, Evalue=3e-64, Organism=Saccharomyces cerevisiae, GI6324923, Length=488, Percent_Identity=32.3770491803279, Blast_Score=227, Evalue=4e-60, Organism=Drosophila melanogaster, GI24648964, Length=493, Percent_Identity=33.8742393509128, Blast_Score=248, Evalue=7e-66, Organism=Drosophila melanogaster, GI28571814, Length=493, Percent_Identity=33.8742393509128, Blast_Score=248, Evalue=8e-66, Organism=Drosophila melanogaster, GI24648966, Length=408, Percent_Identity=34.3137254901961, Blast_Score=221, Evalue=1e-57, Organism=Drosophila melanogaster, GI24581235, Length=489, Percent_Identity=31.0838445807771, Blast_Score=216, Evalue=3e-56, Organism=Drosophila melanogaster, GI24646914, Length=277, Percent_Identity=34.2960288808664, Blast_Score=146, Evalue=3e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 51648; Mature: 51648
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMPRRTKILATLGPATDRPEGLEAVLAAGVDVVRINLSHGEASDHRRRVEAVRTWGEAHG CCCCCEEEEEEECCCCCCCHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCC RRVGVLVDLQGPKIRIERFRNGPVLLRRGDPFILDPTVDPDAGDQTQVGVAYRALPDDLH CEEEEEEECCCCEEEEEEECCCCEEEECCCCEEECCCCCCCCCCCCEECEEEECCCCCCC PGDELLLDDGRLVVRVERIEGTAVHTSVQVGGELSDRKGINRRGGGLSAPALTDKDRVDI CCCCEEEECCEEEEEEEECCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEE VTAAELAADYVAVSFPRCADDIHEARRLLTEAGGRSGIVAKIERAEALDAAEEIMDAADA EEHHHHHHHHHHEECCHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHE IMVARGDLGVEIGDAALPEVQKQLIQTARARNRVAITATQMMESMIDNPIPTRAEVFDVA EEEECCCCCEEECCCHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHCCCCCCHHHHHHHH NAVRDGTDAVMLSAETATGSFPAETVAAMDRVCRAAERSRTVTVSHHRLDEHFTQVDETV HHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHH AMAAMYAANHFAIKALIAITESGGTASWMSRISSGLPIYVLTRHPETRGRVTLYRGVYPL HHHHHHHHHHHEEEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCEEEEECEEEE EFDAEQEDLNALKSRLLARLSKQGLVSQGDYVLVTHGEELGAAGGTNTLRIVCVDDYL ECCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHCCCCCCCEEEEEEECCCC >Mature Secondary Structure MMPRRTKILATLGPATDRPEGLEAVLAAGVDVVRINLSHGEASDHRRRVEAVRTWGEAHG CCCCCEEEEEEECCCCCCCHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCC RRVGVLVDLQGPKIRIERFRNGPVLLRRGDPFILDPTVDPDAGDQTQVGVAYRALPDDLH CEEEEEEECCCCEEEEEEECCCCEEEECCCCEEECCCCCCCCCCCCEECEEEECCCCCCC PGDELLLDDGRLVVRVERIEGTAVHTSVQVGGELSDRKGINRRGGGLSAPALTDKDRVDI CCCCEEEECCEEEEEEEECCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEE VTAAELAADYVAVSFPRCADDIHEARRLLTEAGGRSGIVAKIERAEALDAAEEIMDAADA EEHHHHHHHHHHEECCHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHE IMVARGDLGVEIGDAALPEVQKQLIQTARARNRVAITATQMMESMIDNPIPTRAEVFDVA EEEECCCCCEEECCCHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHCCCCCCHHHHHHHH NAVRDGTDAVMLSAETATGSFPAETVAAMDRVCRAAERSRTVTVSHHRLDEHFTQVDETV HHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHH AMAAMYAANHFAIKALIAITESGGTASWMSRISSGLPIYVLTRHPETRGRVTLYRGVYPL HHHHHHHHHHHEEEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCEEEEECEEEE EFDAEQEDLNALKSRLLARLSKQGLVSQGDYVLVTHGEELGAAGGTNTLRIVCVDDYL ECCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHCCCCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503; 1732206; 1859631; 8439398 [H]