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The map label for this gene is 121997773

Identifier: 121997773

GI number: 121997773

Start: 1053971

End: 1055074

Strand: Reverse

Name: 121997773

Synonym: Hhal_0982

Alternate gene names: NA

Gene position: 1055074-1053971 (Counterclockwise)

Preceding gene: 121997774

Following gene: 121997768

Centisome position: 39.39

GC content: 69.02

Gene sequence:

>1104_bases
ATGCCCGAGGCTTCGCTGGTCGAGGACGCGCTGGCCCGCAACAAGGCGCGGCACGAGCACTACGCCGGGCTGGATTACGT
CCGGCTCACCGACGGCTTCTCCGGCTGGCCGCGGGGGACCGTCTTCCTCGACGGGCGCGCCGTGCCCGGCTACCCCTCCA
TCGGTCGTGTGCTGAACCTGGAGCAGGGCCTGGCGCAGCACTTCCGGGCCCCGTTCCACGCCGAGGAGAAGATCGACGGC
TTCAACGTTCGCCTGGTCCGCCATCGCGGCCAGGATCTCGCCTTCTCGCGCGGCGGTTTCGTCTGCCCCTTCACCACGGA
CCGGTTGCCCGATCTCATCGACCCCGCCGTCTTTCAGGCCGAGCCGGATCTGGTGCTCTGCGCTGAAGTGGCGGGGCCGG
GGAACCCGTACCTGGAGGGGCATCCGCCGGAGATCCACGAGGACGTAGCGCTGCTGGTCTTCGATCTGATGCGCTGGGAC
CACGCCGAGTTCATGGCGGTCGAGGAGCGCCGCGCGTTGCTCCAGGAGCACGGACTGCCAGAGGTGCCGTATCACGGCCG
GTTTACTGTCGATCAGGCCGGGGCCCTGCGCGAGTTGATCGCCGGGCTCGACGCGCGCGGCGTGGAGGGGGTGGTGCTTA
AGGAGGAGGGGGATCGGCGCAAGCGGGCCAAGTACGTCACCCCCGCCTCGGTGGTTCAGGACCTCGGTGCCATGGGGGAT
GCGCTGCTCGATCTGCCCCCGGAGTACTTCACCAATCGGCTGATGCGCCTGGTGCTGATCCTGGAGGAGTCGCCGGAACT
GGACCGCGAAACGCTGCGCGCCGAACTCGGCGCGGCGCTCATCGATCCCCTGCTGAATGCCGCCCGCGAGCACCGCGAGA
CCCACAAAGTGGCCCACCACTTCTGCAGCCGCTTCCGCCACCGGGCCAATGCCGAGCGGTTTGCCGAGCATCTGCGCCGG
GTGCCGCAGAGCCAGATCCACACCACCGTCCGCAGCCTGGAGCAAGCCGCCGACGGCTACTGGGAGCTGCGCTTCGACCG
GGTCTTCCCGCGGATCAGCGGGCTGCTGGGCAACTTCCTCAGCGGTGGGCAGGTCTACGACTAG

Upstream 100 bases:

>100_bases
GGGGCGCGCAATGACATCCTGGCCGAGCATGGCCTGGACCGGGACGGGGTGCGCCGGACCGTGCAGGGTCTCCTGCAGCA
GTCGTAGGGAAGGGGGCGCC

Downstream 100 bases:

>100_bases
GCGTATTCGTCCACCTGGTGATCGTCATCGCCGGTGCGCGCCCGGCGGGCGCGGGCGCGCTGGCCGCTGCGCAGGCGCTC
GTCCACCGCATCCGGTCGCT

Product: ATP dependent DNA ligase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 366

Protein sequence:

>367_residues
MPEASLVEDALARNKARHEHYAGLDYVRLTDGFSGWPRGTVFLDGRAVPGYPSIGRVLNLEQGLAQHFRAPFHAEEKIDG
FNVRLVRHRGQDLAFSRGGFVCPFTTDRLPDLIDPAVFQAEPDLVLCAEVAGPGNPYLEGHPPEIHEDVALLVFDLMRWD
HAEFMAVEERRALLQEHGLPEVPYHGRFTVDQAGALRELIAGLDARGVEGVVLKEEGDRRKRAKYVTPASVVQDLGAMGD
ALLDLPPEYFTNRLMRLVLILEESPELDRETLRAELGAALIDPLLNAAREHRETHKVAHHFCSRFRHRANAERFAEHLRR
VPQSQIHTTVRSLEQAADGYWELRFDRVFPRISGLLGNFLSGGQVYD

Sequences:

>Translated_367_residues
MPEASLVEDALARNKARHEHYAGLDYVRLTDGFSGWPRGTVFLDGRAVPGYPSIGRVLNLEQGLAQHFRAPFHAEEKIDG
FNVRLVRHRGQDLAFSRGGFVCPFTTDRLPDLIDPAVFQAEPDLVLCAEVAGPGNPYLEGHPPEIHEDVALLVFDLMRWD
HAEFMAVEERRALLQEHGLPEVPYHGRFTVDQAGALRELIAGLDARGVEGVVLKEEGDRRKRAKYVTPASVVQDLGAMGD
ALLDLPPEYFTNRLMRLVLILEESPELDRETLRAELGAALIDPLLNAAREHRETHKVAHHFCSRFRHRANAERFAEHLRR
VPQSQIHTTVRSLEQAADGYWELRFDRVFPRISGLLGNFLSGGQVYD
>Mature_366_residues
PEASLVEDALARNKARHEHYAGLDYVRLTDGFSGWPRGTVFLDGRAVPGYPSIGRVLNLEQGLAQHFRAPFHAEEKIDGF
NVRLVRHRGQDLAFSRGGFVCPFTTDRLPDLIDPAVFQAEPDLVLCAEVAGPGNPYLEGHPPEIHEDVALLVFDLMRWDH
AEFMAVEERRALLQEHGLPEVPYHGRFTVDQAGALRELIAGLDARGVEGVVLKEEGDRRKRAKYVTPASVVQDLGAMGDA
LLDLPPEYFTNRLMRLVLILEESPELDRETLRAELGAALIDPLLNAAREHRETHKVAHHFCSRFRHRANAERFAEHLRRV
PQSQIHTTVRSLEQAADGYWELRFDRVFPRISGLLGNFLSGGQVYD

Specific function: Unknown

COG id: COG1423

COG function: function code L; ATP-dependent DNA ligase, homolog of eukaryotic ligase III

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012310
- InterPro:   IPR001072 [H]

Pfam domain/function: PF01068 DNA_ligase_A_M [H]

EC number: NA

Molecular weight: Translated: 41337; Mature: 41206

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEASLVEDALARNKARHEHYAGLDYVRLTDGFSGWPRGTVFLDGRAVPGYPSIGRVLNL
CCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEECCCCCCCCCCHHHHHHH
EQGLAQHFRAPFHAEEKIDGFNVRLVRHRGQDLAFSRGGFVCPFTTDRLPDLIDPAVFQA
HHHHHHHHCCCCCCHHCCCCCEEEEEEECCCCCEECCCCEECCCCCCCCCHHHCCHHHCC
EPDLVLCAEVAGPGNPYLEGHPPEIHEDVALLVFDLMRWDHAEFMAVEERRALLQEHGLP
CCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
EVPYHGRFTVDQAGALRELIAGLDARGVEGVVLKEEGDRRKRAKYVTPASVVQDLGAMGD
CCCCCCCEEHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHCCCHHHHHHHHHHHHH
ALLDLPPEYFTNRLMRLVLILEESPELDRETLRAELGAALIDPLLNAAREHRETHKVAHH
HHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FCSRFRHRANAERFAEHLRRVPQSQIHTTVRSLEQAADGYWELRFDRVFPRISGLLGNFL
HHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHH
SGGQVYD
CCCCCCC
>Mature Secondary Structure 
PEASLVEDALARNKARHEHYAGLDYVRLTDGFSGWPRGTVFLDGRAVPGYPSIGRVLNL
CCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEECCCCCCCCCCHHHHHHH
EQGLAQHFRAPFHAEEKIDGFNVRLVRHRGQDLAFSRGGFVCPFTTDRLPDLIDPAVFQA
HHHHHHHHCCCCCCHHCCCCCEEEEEEECCCCCEECCCCEECCCCCCCCCHHHCCHHHCC
EPDLVLCAEVAGPGNPYLEGHPPEIHEDVALLVFDLMRWDHAEFMAVEERRALLQEHGLP
CCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
EVPYHGRFTVDQAGALRELIAGLDARGVEGVVLKEEGDRRKRAKYVTPASVVQDLGAMGD
CCCCCCCEEHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHCCCHHHHHHHHHHHHH
ALLDLPPEYFTNRLMRLVLILEESPELDRETLRAELGAALIDPLLNAAREHRETHKVAHH
HHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FCSRFRHRANAERFAEHLRRVPQSQIHTTVRSLEQAADGYWELRFDRVFPRISGLLGNFL
HHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHH
SGGQVYD
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]