Click here to switch to the map view.

The map label for this gene is perR [H]

Identifier: 121997768

GI number: 121997768

Start: 1049279

End: 1049722

Strand: Reverse

Name: perR [H]

Synonym: Hhal_0977

Alternate gene names: 121997768

Gene position: 1049722-1049279 (Counterclockwise)

Preceding gene: 121997773

Following gene: 121997764

Centisome position: 39.19

GC content: 65.54

Gene sequence:

>444_bases
ATGACGGAAACCCGAGACAATTCGATCCTCAGCGAAGGGCAGGGTGCCGGCTATCTGCGCTCGGTGGGGCTGCGCCCGAC
CCAGCAGCGGCTGGCCCTGGCCGGACTTTTGTTCTCCGGTGAGGACCGCCACGTGACCGCCGAATCCCTGTACGAGGAGG
CCGCGGCGCAAGGGGTCAAGGTCTCGCTGGCCACCGTCTACAACACCCTCAACCAGTTCAAGGAAGCCGGCCTGCTGCGC
GAAGTCATCGTGCACTCCGGCAAGTCCTACTTCGACACCAAGACCGAGGCCCACCACCACCTCTACGACGAGGACAGCGG
CAAGATCGAGGACGTCCACCTGGAGGTGGATGAGCACGAGGTCCGCCGCAAGGTCCAGGTCCCGGAAGGTAAGCAGATCG
CCGGCGTGGACATCGTCGTGCGGCTGCGCGCGGATCGGGGGTAG

Upstream 100 bases:

>100_bases
GCAGTTGGGAAGACGGGGTGGGAGGTTGAGCGGGGCGCCGGCTTTGCATTAGACTAATTCTGTGTTTTTGCGCACAGTCG
CCAGCGGGCAAGGATCTGAA

Downstream 100 bases:

>100_bases
CGCGCCCGATGTCGCCGCCGGCTGGGCCCCGTGCCCCCGCGGCCGCTTAGCGCGCCAGAAGCTCGGCTAGCCGATCGGCG
TGGAGGCATTGCTGACGGCG

Product: ferric uptake regulator family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MTETRDNSILSEGQGAGYLRSVGLRPTQQRLALAGLLFSGEDRHVTAESLYEEAAAQGVKVSLATVYNTLNQFKEAGLLR
EVIVHSGKSYFDTKTEAHHHLYDEDSGKIEDVHLEVDEHEVRRKVQVPEGKQIAGVDIVVRLRADRG

Sequences:

>Translated_147_residues
MTETRDNSILSEGQGAGYLRSVGLRPTQQRLALAGLLFSGEDRHVTAESLYEEAAAQGVKVSLATVYNTLNQFKEAGLLR
EVIVHSGKSYFDTKTEAHHHLYDEDSGKIEDVHLEVDEHEVRRKVQVPEGKQIAGVDIVVRLRADRG
>Mature_146_residues
TETRDNSILSEGQGAGYLRSVGLRPTQQRLALAGLLFSGEDRHVTAESLYEEAAAQGVKVSLATVYNTLNQFKEAGLLRE
VIVHSGKSYFDTKTEAHHHLYDEDSGKIEDVHLEVDEHEVRRKVQVPEGKQIAGVDIVVRLRADRG

Specific function: Manganese-dependent repressor that controls a regulon of oxidative stress resistance and iron-storage proteins. May act as a hydrogen peroxide and organic hydroperoxide sensor [H]

COG id: COG0735

COG function: function code P; Fe2+/Zn2+ uptake regulation proteins

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Fur family [H]

Homologues:

Organism=Escherichia coli, GI1786899, Length=92, Percent_Identity=39.1304347826087, Blast_Score=64, Evalue=3e-12,

Paralogues:

None

Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002481 [H]

Pfam domain/function: PF01475 FUR [H]

EC number: NA

Molecular weight: Translated: 16325; Mature: 16194

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTETRDNSILSEGQGAGYLRSVGLRPTQQRLALAGLLFSGEDRHVTAESLYEEAAAQGVK
CCCCCCCCHHHCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCCEECHHHHHHHHHHCCCE
VSLATVYNTLNQFKEAGLLREVIVHSGKSYFDTKTEAHHHLYDEDSGKIEDVHLEVDEHE
EHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCEEEEEEECCHHH
VRRKVQVPEGKQIAGVDIVVRLRADRG
HHHHCCCCCCCEEECEEEEEEEECCCC
>Mature Secondary Structure 
TETRDNSILSEGQGAGYLRSVGLRPTQQRLALAGLLFSGEDRHVTAESLYEEAAAQGVK
CCCCCCCHHHCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCCEECHHHHHHHHHHCCCE
VSLATVYNTLNQFKEAGLLREVIVHSGKSYFDTKTEAHHHLYDEDSGKIEDVHLEVDEHE
EHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCEEEEEEECCHHH
VRRKVQVPEGKQIAGVDIVVRLRADRG
HHHHCCCCCCCEEECEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA