| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is lnt [H]
Identifier: 121997680
GI number: 121997680
Start: 965947
End: 967479
Strand: Reverse
Name: lnt [H]
Synonym: Hhal_0889
Alternate gene names: 121997680
Gene position: 967479-965947 (Counterclockwise)
Preceding gene: 121997681
Following gene: 121997676
Centisome position: 36.12
GC content: 72.86
Gene sequence:
>1533_bases ATGAGGACGGCTGAGCGCCTGGCCGCCGGGCGTGCCGGTGTGCTCGCGGCCGGGCTGGCTGGGGGTTTGCTGCCCCTGGC GTTGGCCCCGCTGGGCTGGGCCGTGCTGGCGGTGCTGTCCCCCGCCGTGCTCTTCGCCGTGGCGGCGCTGGCGCCACGGC GGCGCGCCCTGCAGGCCGGCTACGCCTTCGGGCTGGGCCAGTTCGGGGTCGGCGTCTCCTGGGTCTTTGTCAGCATCAAC GATTACGGCGGCGCCGGTCCGGTGCTCTCCGGGGGAGTCACCGTGCTCTTCGTGGCCTTCCTGGCCCTCTTCCCCCTACT GGCGGTGGTGCTCGGACGGGGGCTGGGGCGCTGCTCCGGGGTGCGCCTGCTGGTGACTCTGCCAGCGGCGTGGGTGGCGG TGGAGTGGCTGCGCACCTGGCTGTTCACCGGCTTCCCGTGGCTGTTTGTCGGCTACGCCGCCCTAGATACCCCGCTGGCT GGCCTGGCGCCGGTGATCGGCGTGCTCGGCCTGAGCGCCCTGCTGGTATTGCTGGCCGGGGCCGCGGCGTGGCTGGTGGT GGCCCCGGGGTGGCGGCGCGCGGCCAGTGTGGCGGCGTTGCTGGTGGCCGCGGTGGCTGCCGGCGTGGCGGCGGATCGGC CGTGGACCGAGGCCCACGGCGAGCCGGTGCGTGCGGCGCTGCTCCAGGGCAACTTCAGTCAGGACCTCAAGTGGGACCCG GCGGAGCTCCAGCGCATCCAGACCCGCTACGCCGAGCTGACTGCCGAGCACCCGGAGGCGGACCTGGTGATCTGGCCGGA GACGGCCATCCCGCGCCGCTTCGATGCGGTGCAGCCGTATCTAGAGCAGGTGGCCGAGCAGGTCCGCGAGACCGGCGGCA CCCTGGTGCTCGGCATCCCCTACCAGGAGTGGGCCCCGGATGGCAGTCAGCTGCACAACAGCGTGGCCGTCCTTGGCGAG GAGCGTGACGTCTACCACAAGCGTCATCTGGTCCCCTACGGCGAGTACGTGCCGTTCCGCGACCTCTTCGGCCGCAGCCT CGACTTCCTCGGCGCCCCGATGGCCGACTACAGCCGCGGGCCCCGGCCGGAGCCGCTGGCCGTCGACAACCGCCTGCGTC TCGGGGCCACAATCTGTTACGAGGTGGCCTACCCGGTGGCCGTGCGGCGCACGGCGGGAGAGGTGGACCTGCTGGTCAAC GTCAGCAACGACGCCTGGTTCGGTGACTCCCTGGCGCCCCATCAGCACCTGCAGAAGGCGCGCATGCGCGCTGCGGAGTC CGGGCGCTGGATGCTGCGTGCGACCAATACCGGCATCACCGCCGTGATCGGTCCCGACGGTGAGGTGGTCGAGCGTCGAC CGCAGTTCGAGGTGGCCACCCTCGCCACCGAGGTCGAGCGCCGCAGCGGCACCACCCCCTACGCCCGCATCGGCGACGGT CCCCTGCTGGGACTGCTGGCCGCTGCGCTGCTGCTGCCCGGAGGGTTGCGGTGGTATCGCCGGCGGCGGGTCGGCGGGTC AGCCGCCGAGTGA
Upstream 100 bases:
>100_bases GGCGAGCGCATCGTCTTTGCCGGCTTCGAGTTCCGGGTGCTGCGCGCCGATCAGCGCCGCATCCACCTGCTGCGGGTCAT GCCCGTGGGAAGTGAGGGCC
Downstream 100 bases:
>100_bases GCCCAGCCAGGGCAGGACCACCGGCAGCAGGAAGGCGGTCACCAGCCCGGCCAGCCCCAGGCCCAGGCCGGCGAAGGCGC CGGCGGCGGCGCTGCTGCTG
Product: apolipoprotein N-acyltransferase
Products: NA
Alternate protein names: ALP N-acyltransferase [H]
Number of amino acids: Translated: 510; Mature: 510
Protein sequence:
>510_residues MRTAERLAAGRAGVLAAGLAGGLLPLALAPLGWAVLAVLSPAVLFAVAALAPRRRALQAGYAFGLGQFGVGVSWVFVSIN DYGGAGPVLSGGVTVLFVAFLALFPLLAVVLGRGLGRCSGVRLLVTLPAAWVAVEWLRTWLFTGFPWLFVGYAALDTPLA GLAPVIGVLGLSALLVLLAGAAAWLVVAPGWRRAASVAALLVAAVAAGVAADRPWTEAHGEPVRAALLQGNFSQDLKWDP AELQRIQTRYAELTAEHPEADLVIWPETAIPRRFDAVQPYLEQVAEQVRETGGTLVLGIPYQEWAPDGSQLHNSVAVLGE ERDVYHKRHLVPYGEYVPFRDLFGRSLDFLGAPMADYSRGPRPEPLAVDNRLRLGATICYEVAYPVAVRRTAGEVDLLVN VSNDAWFGDSLAPHQHLQKARMRAAESGRWMLRATNTGITAVIGPDGEVVERRPQFEVATLATEVERRSGTTPYARIGDG PLLGLLAAALLLPGGLRWYRRRRVGGSAAE
Sequences:
>Translated_510_residues MRTAERLAAGRAGVLAAGLAGGLLPLALAPLGWAVLAVLSPAVLFAVAALAPRRRALQAGYAFGLGQFGVGVSWVFVSIN DYGGAGPVLSGGVTVLFVAFLALFPLLAVVLGRGLGRCSGVRLLVTLPAAWVAVEWLRTWLFTGFPWLFVGYAALDTPLA GLAPVIGVLGLSALLVLLAGAAAWLVVAPGWRRAASVAALLVAAVAAGVAADRPWTEAHGEPVRAALLQGNFSQDLKWDP AELQRIQTRYAELTAEHPEADLVIWPETAIPRRFDAVQPYLEQVAEQVRETGGTLVLGIPYQEWAPDGSQLHNSVAVLGE ERDVYHKRHLVPYGEYVPFRDLFGRSLDFLGAPMADYSRGPRPEPLAVDNRLRLGATICYEVAYPVAVRRTAGEVDLLVN VSNDAWFGDSLAPHQHLQKARMRAAESGRWMLRATNTGITAVIGPDGEVVERRPQFEVATLATEVERRSGTTPYARIGDG PLLGLLAAALLLPGGLRWYRRRRVGGSAAE >Mature_510_residues MRTAERLAAGRAGVLAAGLAGGLLPLALAPLGWAVLAVLSPAVLFAVAALAPRRRALQAGYAFGLGQFGVGVSWVFVSIN DYGGAGPVLSGGVTVLFVAFLALFPLLAVVLGRGLGRCSGVRLLVTLPAAWVAVEWLRTWLFTGFPWLFVGYAALDTPLA GLAPVIGVLGLSALLVLLAGAAAWLVVAPGWRRAASVAALLVAAVAAGVAADRPWTEAHGEPVRAALLQGNFSQDLKWDP AELQRIQTRYAELTAEHPEADLVIWPETAIPRRFDAVQPYLEQVAEQVRETGGTLVLGIPYQEWAPDGSQLHNSVAVLGE ERDVYHKRHLVPYGEYVPFRDLFGRSLDFLGAPMADYSRGPRPEPLAVDNRLRLGATICYEVAYPVAVRRTAGEVDLLVN VSNDAWFGDSLAPHQHLQKARMRAAESGRWMLRATNTGITAVIGPDGEVVERRPQFEVATLATEVERRSGTTPYARIGDG PLLGLLAAALLLPGGLRWYRRRRVGGSAAE
Specific function: Transfers the fatty acyl group on membrane lipoproteins [H]
COG id: COG0815
COG function: function code M; Apolipoprotein N-acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Escherichia coli, GI1786878, Length=502, Percent_Identity=38.2470119521912, Blast_Score=298, Evalue=7e-82,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004563 - InterPro: IPR003010 [H]
Pfam domain/function: PF00795 CN_hydrolase [H]
EC number: 2.3.1.- [C]
Molecular weight: Translated: 54520; Mature: 54520
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: PS50263 CN_HYDROLASE ; PS00211 ABC_TRANSPORTER_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTAERLAAGRAGVLAAGLAGGLLPLALAPLGWAVLAVLSPAVLFAVAALAPRRRALQAG CCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YAFGLGQFGVGVSWVFVSINDYGGAGPVLSGGVTVLFVAFLALFPLLAVVLGRGLGRCSG HHHCCHHHCCCEEEEEEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC VRLLVTLPAAWVAVEWLRTWLFTGFPWLFVGYAALDTPLAGLAPVIGVLGLSALLVLLAG CEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH AAAWLVVAPGWRRAASVAALLVAAVAAGVAADRPWTEAHGEPVRAALLQGNFSQDLKWDP HHHEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHCCCCCCCCCCCH AELQRIQTRYAELTAEHPEADLVIWPETAIPRRFDAVQPYLEQVAEQVRETGGTLVLGIP HHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECC YQEWAPDGSQLHNSVAVLGEERDVYHKRHLVPYGEYVPFRDLFGRSLDFLGAPMADYSRG HHHHCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCHHHHHCCCHHHHCCCHHHHCCC PRPEPLAVDNRLRLGATICYEVAYPVAVRRTAGEVDLLVNVSNDAWFGDSLAPHQHLQKA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHH RMRAAESGRWMLRATNTGITAVIGPDGEVVERRPQFEVATLATEVERRSGTTPYARIGDG HHHHHCCCCEEEEEECCCEEEEECCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCEECCCC PLLGLLAAALLLPGGLRWYRRRRVGGSAAE HHHHHHHHHHHCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure MRTAERLAAGRAGVLAAGLAGGLLPLALAPLGWAVLAVLSPAVLFAVAALAPRRRALQAG CCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YAFGLGQFGVGVSWVFVSINDYGGAGPVLSGGVTVLFVAFLALFPLLAVVLGRGLGRCSG HHHCCHHHCCCEEEEEEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC VRLLVTLPAAWVAVEWLRTWLFTGFPWLFVGYAALDTPLAGLAPVIGVLGLSALLVLLAG CEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH AAAWLVVAPGWRRAASVAALLVAAVAAGVAADRPWTEAHGEPVRAALLQGNFSQDLKWDP HHHEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHCCCCCCCCCCCH AELQRIQTRYAELTAEHPEADLVIWPETAIPRRFDAVQPYLEQVAEQVRETGGTLVLGIP HHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECC YQEWAPDGSQLHNSVAVLGEERDVYHKRHLVPYGEYVPFRDLFGRSLDFLGAPMADYSRG HHHHCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCHHHHHCCCHHHHCCCHHHHCCC PRPEPLAVDNRLRLGATICYEVAYPVAVRRTAGEVDLLVNVSNDAWFGDSLAPHQHLQKA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHH RMRAAESGRWMLRATNTGITAVIGPDGEVVERRPQFEVATLATEVERRSGTTPYARIGDG HHHHHCCCCEEEEEECCCEEEEECCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCEECCCC PLLGLLAAALLLPGGLRWYRRRRVGGSAAE HHHHHHHHHHHCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Acyltransferases; Transferring groups other than amino-acyl groups [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA