Definition Halorhodospira halophila SL1 chromosome, complete genome.
Accession NC_008789
Length 2,678,452

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The map label for this gene is bfd [C]

Identifier: 121997674

GI number: 121997674

Start: 960908

End: 961180

Strand: Reverse

Name: bfd [C]

Synonym: Hhal_0883

Alternate gene names: 121997674

Gene position: 961180-960908 (Counterclockwise)

Preceding gene: 121997675

Following gene: 121997673

Centisome position: 35.89

GC content: 73.63

Gene sequence:

>273_bases
ATGTACGTCTGCATCTGTAACGCCGTAACCGACCGGCAGATCCGCGAGGCCATGGCCAGTGGCTGCGCCTCCATGCGCGA
GCTGCGCGCCCGGCTGGGCGTGGCCGGTTGCTGTGGGAAGTGCGTCCCGGAGGCCCGGCAACTCCTCGGCGAATGTGCCG
GGTGCCCACTGGAGCGCCGGCCCGATGCGGCCGGTCCGGAACCGGTCCCCGTTGAGTCGCCCGGGGTCGGGACGGCGGCC
GGAGGGGCGACAGACGCGGTGCGCGGGCCCTGA

Upstream 100 bases:

>100_bases
GCTCGGCGGCCTCATGCGGGCGGGCAAGTAATCGCTCGCAATTGACAATCACTCGCGTTCAAGGTTTGATGGTGATCAGT
CGTGATGATCGGGGCCTGCC

Downstream 100 bases:

>100_bases
TAGAATCACCACTGGACACTCAGGAACGCGTTCATCAAAGGGGGCGCAATGGCGAGCGACAAGAAGGTCATCGAATACCT
CAACGGCGGGCTCAAGAAGG

Product: BFD/(2Fe-2S)-binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 90; Mature: 90

Protein sequence:

>90_residues
MYVCICNAVTDRQIREAMASGCASMRELRARLGVAGCCGKCVPEARQLLGECAGCPLERRPDAAGPEPVPVESPGVGTAA
GGATDAVRGP

Sequences:

>Translated_90_residues
MYVCICNAVTDRQIREAMASGCASMRELRARLGVAGCCGKCVPEARQLLGECAGCPLERRPDAAGPEPVPVESPGVGTAA
GGATDAVRGP
>Mature_90_residues
MYVCICNAVTDRQIREAMASGCASMRELRARLGVAGCCGKCVPEARQLLGECAGCPLERRPDAAGPEPVPVESPGVGTAA
GGATDAVRGP

Specific function: Seems To Associate With Bfr; Could Be A General Redox And/Or Regulatory Component Participating In The Iron Storage Mobilization Functions Of Bfr. Could Participate In The Release Or The Delivery Of Iron From/To Bacterioferritin (Or Other Iron Complexes)

COG id: COG2906

COG function: function code P; Bacterioferritin-associated ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9160; Mature: 9160

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

8.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
12.2 %Cys+Met (Translated Protein)
8.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
12.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYVCICNAVTDRQIREAMASGCASMRELRARLGVAGCCGKCVPEARQLLGECAGCPLERR
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHCCCCCCC
PDAAGPEPVPVESPGVGTAAGGATDAVRGP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MYVCICNAVTDRQIREAMASGCASMRELRARLGVAGCCGKCVPEARQLLGECAGCPLERR
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHCCCCCCC
PDAAGPEPVPVESPGVGTAAGGATDAVRGP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA