| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is bfd [C]
Identifier: 121997674
GI number: 121997674
Start: 960908
End: 961180
Strand: Reverse
Name: bfd [C]
Synonym: Hhal_0883
Alternate gene names: 121997674
Gene position: 961180-960908 (Counterclockwise)
Preceding gene: 121997675
Following gene: 121997673
Centisome position: 35.89
GC content: 73.63
Gene sequence:
>273_bases ATGTACGTCTGCATCTGTAACGCCGTAACCGACCGGCAGATCCGCGAGGCCATGGCCAGTGGCTGCGCCTCCATGCGCGA GCTGCGCGCCCGGCTGGGCGTGGCCGGTTGCTGTGGGAAGTGCGTCCCGGAGGCCCGGCAACTCCTCGGCGAATGTGCCG GGTGCCCACTGGAGCGCCGGCCCGATGCGGCCGGTCCGGAACCGGTCCCCGTTGAGTCGCCCGGGGTCGGGACGGCGGCC GGAGGGGCGACAGACGCGGTGCGCGGGCCCTGA
Upstream 100 bases:
>100_bases GCTCGGCGGCCTCATGCGGGCGGGCAAGTAATCGCTCGCAATTGACAATCACTCGCGTTCAAGGTTTGATGGTGATCAGT CGTGATGATCGGGGCCTGCC
Downstream 100 bases:
>100_bases TAGAATCACCACTGGACACTCAGGAACGCGTTCATCAAAGGGGGCGCAATGGCGAGCGACAAGAAGGTCATCGAATACCT CAACGGCGGGCTCAAGAAGG
Product: BFD/(2Fe-2S)-binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 90; Mature: 90
Protein sequence:
>90_residues MYVCICNAVTDRQIREAMASGCASMRELRARLGVAGCCGKCVPEARQLLGECAGCPLERRPDAAGPEPVPVESPGVGTAA GGATDAVRGP
Sequences:
>Translated_90_residues MYVCICNAVTDRQIREAMASGCASMRELRARLGVAGCCGKCVPEARQLLGECAGCPLERRPDAAGPEPVPVESPGVGTAA GGATDAVRGP >Mature_90_residues MYVCICNAVTDRQIREAMASGCASMRELRARLGVAGCCGKCVPEARQLLGECAGCPLERRPDAAGPEPVPVESPGVGTAA GGATDAVRGP
Specific function: Seems To Associate With Bfr; Could Be A General Redox And/Or Regulatory Component Participating In The Iron Storage Mobilization Functions Of Bfr. Could Participate In The Release Or The Delivery Of Iron From/To Bacterioferritin (Or Other Iron Complexes)
COG id: COG2906
COG function: function code P; Bacterioferritin-associated ferredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9160; Mature: 9160
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
8.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 12.2 %Cys+Met (Translated Protein) 8.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 12.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYVCICNAVTDRQIREAMASGCASMRELRARLGVAGCCGKCVPEARQLLGECAGCPLERR CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHCCCCCCC PDAAGPEPVPVESPGVGTAAGGATDAVRGP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MYVCICNAVTDRQIREAMASGCASMRELRARLGVAGCCGKCVPEARQLLGECAGCPLERR CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHCCCCCCC PDAAGPEPVPVESPGVGTAAGGATDAVRGP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA