| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is ptsP [H]
Identifier: 121997675
GI number: 121997675
Start: 961250
End: 963517
Strand: Reverse
Name: ptsP [H]
Synonym: Hhal_0884
Alternate gene names: 121997675
Gene position: 963517-961250 (Counterclockwise)
Preceding gene: 121997676
Following gene: 121997674
Centisome position: 35.97
GC content: 69.75
Gene sequence:
>2268_bases ATGCTCGAAATCCTCCACCGCGTCTCCCGAGAAGTGAACGCCGCCCCGAACCTGCGCCAGGGGCTGCGGATCATCGTCGA GCGGGTCGCCGATGCCATGGCGGTGGATGTCTGCTCGGTGTACCTCCTCGACGCCACCCAGGGCGACTTCGTCCTCATGG ACACCCGTGGCCTGAACACCGAGTCGGTGGGCCGCGTACGCCTGACCTCCGCCGAGGGGCTGGTGGGCCTGGTGGCCGAG CGCGAGGAGCCGATCAACCTCAAGAACGCCCCGGCGCACTCGCGGTTTCGCTACTTCCCCGAGACCGGCGAGGAGCGCTA CTCCTCCTTTCTCGGGGTGCCCATCATCCACTACCGCTCGGTGCTCGGTGTGCTGGTGGTCCAGCAGGCCGAAGAGCGCC GCTTCGAGGAGAACGAGGTCGCCTTCCTGGTCACCCTGGCGGCGCAGCTGGCCGGGGCGATCGCCCACGCCCGGGCCAGC GGCGGGATCCACGACATCGGCGACGAGCCGGTGGCCGGGGACAGTCGCGCCCTGCGCGGTCTGCCCGGGGCCCCGGGGGT GGCCATCGGCACGGCGGTGGTCCCCTATGCCCAGTCGGACCTCAACGCCATCCCCGATCGTACGGCCGCCGACCCCGAGG CCGAGGTGGCGACCTTCGAGGCCGCCGTCGACCAGGTCACCGCCGAGCTGCGCCAGCTCGGCCAGCAGATCTCCGGCTCG GTCAGCGCCGACGAGCAGATGCTCTTCGATGTCTATCTGCGCATGCTCGAAGGCGATAGCCTGGTCAGCGAGACCGTCGA GCGCATCCGCGCCGGCAACTGGGCGCCCGGCGCGTTGCGCCAGGTCATCGGGGAGCACGTGCAGGTCTTCGAGAACATGG ACGACCCCTACCTGCGCGAGCGGGCCAGCGACATCCGCGACCTTGGGCGGCGGATCCTCGGGCGCCTGCGCGATGAGGGC GGACGGGTGGAGGACCTGCCCGAGAAGGCCGTGTTGGTCGGCCACGAGGTCAGCGCCTCGCAACTGGCCGAGATCCCCAG TGATCGGCTGGTCGGTGTTGTCTCGGCGACCGGTTCGCGCAACTCCCACGTGGCCATCCTCGCCCGCGCCCTGGGTATCC CGGCGGTGATGGGGGTGGACGACCTGCGGACCCGGAAGATGGACGGCCGGCCGGTGGTGGTCGACGGCTACGCGGGGCGC TTCTACGTCGATCCCACGGAGACCGTGGAGCAGGAGTATCAGCGCCTGATCCGCGACGAGGCGGAGTTCACCGAAGGGCT CGAGGCGGTGCGCGACGAGCCGGCGATCAGCCCCGACGGCCGCAACCTGGCCCTCTACGCCAACACCGGCCTGATCTCCG ATATCAATCTGTCGCTGGCGGCCGGTTGTGACGGCATCGGGCTGCACCGCACCGAGTTCCCGTTCCTGATCCGTGACCGC TTCCCGGGCGAAGAGGAGCAGGCTGACCTCTACCGCCGGGTGCTGGAGCAGTTCGCACCGAAGCCCGTCACCCTGCGTAC CCTGGATGTCGGCGGCGACAAGTCGCTGGCCTACTTCCCCATCGAGGAAGAGAACCCCTTCCTCGGTTGGCGGGGGATCC GCCTGACCCTGGACCACCCGGAGATCTTCCTCACCCAGCTGCGCGCCATGCTGCGCGCCGACGTTGGCCTGGGGAATCTG CAGATCCTCCTGCCCATGGTCAGTCGCCTGGAGGAGATCGCCGACGTGCGTCGGCTGTTGCTGCGCGCCCGCCAGGAGCT GGCCGAGGAGGGCATCCAGGCGCGCATCCCGCCCCTGGGCGTGATGATCGAGGTGCCTGCCACCATCTACCAGATCGATC GCTACTGCGATCAGGCCGACTTCCTCTCCCTCGGCTCCAACGACCTGACCCAGTACCTGCTGGCTGTGGATCGCAACAAC AGCCGCGTGGCCGGGCTCTACGACGAGCTGCACCCGGCCGTGCTCGGCGCGGTGCAGCACGTGGCCCAGGCGGCGCGGCG CCACGGCAAACGTCTGACCGTCTGCGGCGGCATGGCCGGCGATCCGGCCGGGGCCATCCTGCTCATGGGCTTCGGCATCG AAGGGTTATCGATGAGCGTCTCGAGCCTGCTGCGCATCAAGTGGGTGGTGCGCCGCGTGCCCGTCCGGCGCGCCGCCGAG CTGGCCAACCGGGCCGTCGAGATGGACTCCCCCGAGGAGGTGCGCCGCATGCTCCGCCGTACCCTGGAGGAGTACGAGCT CGGCGGCCTCATGCGGGCGGGCAAGTAA
Upstream 100 bases:
>100_bases ATCTGCAGGCCGATGACTGGGCCGGCACCGGCACCGAGGGTGGCCCCGCTGCGGTCATCCCGCCGGCGGCTCGGCGCCGA TTGCGATAGGGCGGGGCTTG
Downstream 100 bases:
>100_bases TCGCTCGCAATTGACAATCACTCGCGTTCAAGGTTTGATGGTGATCAGTCGTGATGATCGGGGCCTGCCATGTACGTCTG CATCTGTAACGCCGTAACCG
Product: phosphoenolpyruvate-protein phosphotransferase PtsP
Products: NA
Alternate protein names: Enzyme I-Ntr; Phosphotransferase system, enzyme I [H]
Number of amino acids: Translated: 755; Mature: 755
Protein sequence:
>755_residues MLEILHRVSREVNAAPNLRQGLRIIVERVADAMAVDVCSVYLLDATQGDFVLMDTRGLNTESVGRVRLTSAEGLVGLVAE REEPINLKNAPAHSRFRYFPETGEERYSSFLGVPIIHYRSVLGVLVVQQAEERRFEENEVAFLVTLAAQLAGAIAHARAS GGIHDIGDEPVAGDSRALRGLPGAPGVAIGTAVVPYAQSDLNAIPDRTAADPEAEVATFEAAVDQVTAELRQLGQQISGS VSADEQMLFDVYLRMLEGDSLVSETVERIRAGNWAPGALRQVIGEHVQVFENMDDPYLRERASDIRDLGRRILGRLRDEG GRVEDLPEKAVLVGHEVSASQLAEIPSDRLVGVVSATGSRNSHVAILARALGIPAVMGVDDLRTRKMDGRPVVVDGYAGR FYVDPTETVEQEYQRLIRDEAEFTEGLEAVRDEPAISPDGRNLALYANTGLISDINLSLAAGCDGIGLHRTEFPFLIRDR FPGEEEQADLYRRVLEQFAPKPVTLRTLDVGGDKSLAYFPIEEENPFLGWRGIRLTLDHPEIFLTQLRAMLRADVGLGNL QILLPMVSRLEEIADVRRLLLRARQELAEEGIQARIPPLGVMIEVPATIYQIDRYCDQADFLSLGSNDLTQYLLAVDRNN SRVAGLYDELHPAVLGAVQHVAQAARRHGKRLTVCGGMAGDPAGAILLMGFGIEGLSMSVSSLLRIKWVVRRVPVRRAAE LANRAVEMDSPEEVRRMLRRTLEEYELGGLMRAGK
Sequences:
>Translated_755_residues MLEILHRVSREVNAAPNLRQGLRIIVERVADAMAVDVCSVYLLDATQGDFVLMDTRGLNTESVGRVRLTSAEGLVGLVAE REEPINLKNAPAHSRFRYFPETGEERYSSFLGVPIIHYRSVLGVLVVQQAEERRFEENEVAFLVTLAAQLAGAIAHARAS GGIHDIGDEPVAGDSRALRGLPGAPGVAIGTAVVPYAQSDLNAIPDRTAADPEAEVATFEAAVDQVTAELRQLGQQISGS VSADEQMLFDVYLRMLEGDSLVSETVERIRAGNWAPGALRQVIGEHVQVFENMDDPYLRERASDIRDLGRRILGRLRDEG GRVEDLPEKAVLVGHEVSASQLAEIPSDRLVGVVSATGSRNSHVAILARALGIPAVMGVDDLRTRKMDGRPVVVDGYAGR FYVDPTETVEQEYQRLIRDEAEFTEGLEAVRDEPAISPDGRNLALYANTGLISDINLSLAAGCDGIGLHRTEFPFLIRDR FPGEEEQADLYRRVLEQFAPKPVTLRTLDVGGDKSLAYFPIEEENPFLGWRGIRLTLDHPEIFLTQLRAMLRADVGLGNL QILLPMVSRLEEIADVRRLLLRARQELAEEGIQARIPPLGVMIEVPATIYQIDRYCDQADFLSLGSNDLTQYLLAVDRNN SRVAGLYDELHPAVLGAVQHVAQAARRHGKRLTVCGGMAGDPAGAILLMGFGIEGLSMSVSSLLRIKWVVRRVPVRRAAE LANRAVEMDSPEEVRRMLRRTLEEYELGGLMRAGK >Mature_755_residues MLEILHRVSREVNAAPNLRQGLRIIVERVADAMAVDVCSVYLLDATQGDFVLMDTRGLNTESVGRVRLTSAEGLVGLVAE REEPINLKNAPAHSRFRYFPETGEERYSSFLGVPIIHYRSVLGVLVVQQAEERRFEENEVAFLVTLAAQLAGAIAHARAS GGIHDIGDEPVAGDSRALRGLPGAPGVAIGTAVVPYAQSDLNAIPDRTAADPEAEVATFEAAVDQVTAELRQLGQQISGS VSADEQMLFDVYLRMLEGDSLVSETVERIRAGNWAPGALRQVIGEHVQVFENMDDPYLRERASDIRDLGRRILGRLRDEG GRVEDLPEKAVLVGHEVSASQLAEIPSDRLVGVVSATGSRNSHVAILARALGIPAVMGVDDLRTRKMDGRPVVVDGYAGR FYVDPTETVEQEYQRLIRDEAEFTEGLEAVRDEPAISPDGRNLALYANTGLISDINLSLAAGCDGIGLHRTEFPFLIRDR FPGEEEQADLYRRVLEQFAPKPVTLRTLDVGGDKSLAYFPIEEENPFLGWRGIRLTLDHPEIFLTQLRAMLRADVGLGNL QILLPMVSRLEEIADVRRLLLRARQELAEEGIQARIPPLGVMIEVPATIYQIDRYCDQADFLSLGSNDLTQYLLAVDRNN SRVAGLYDELHPAVLGAVQHVAQAARRHGKRLTVCGGMAGDPAGAILLMGFGIEGLSMSVSSLLRIKWVVRRVPVRRAAE LANRAVEMDSPEEVRRMLRRTLEEYELGGLMRAGK
Specific function: Component of the phosphoenolpyruvate-dependent nitrogen- metabolic phosphotransferase system (nitrogen-metabolic PTS), that seems to be involved in regulating nitrogen metabolism. Enzyme I- Ntr transfers the phosphoryl group from phosphoenolpyruvate (PEP)
COG id: COG3605
COG function: function code T; Signal transduction protein containing GAF and PtsI domains
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GAF domain [H]
Homologues:
Organism=Escherichia coli, GI1789193, Length=757, Percent_Identity=43.4610303830911, Blast_Score=591, Evalue=1e-170, Organism=Escherichia coli, GI1788756, Length=576, Percent_Identity=33.8541666666667, Blast_Score=327, Evalue=3e-90, Organism=Escherichia coli, GI48994992, Length=561, Percent_Identity=33.8680926916221, Blast_Score=275, Evalue=9e-75, Organism=Escherichia coli, GI1788726, Length=566, Percent_Identity=33.0388692579505, Blast_Score=274, Evalue=1e-74, Organism=Escherichia coli, GI1787994, Length=406, Percent_Identity=29.064039408867, Blast_Score=115, Evalue=9e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003018 - InterPro: IPR008279 - InterPro: IPR006318 - InterPro: IPR018274 - InterPro: IPR023151 - InterPro: IPR000121 - InterPro: IPR008731 - InterPro: IPR015813 [H]
Pfam domain/function: PF01590 GAF; PF05524 PEP-utilisers_N; PF00391 PEP-utilizers; PF02896 PEP-utilizers_C [H]
EC number: =2.7.3.9 [H]
Molecular weight: Translated: 82964; Mature: 82964
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: PS00742 PEP_ENZYMES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEILHRVSREVNAAPNLRQGLRIIVERVADAMAVDVCSVYLLDATQGDFVLMDTRGLNT CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEECCCCCC ESVGRVRLTSAEGLVGLVAEREEPINLKNAPAHSRFRYFPETGEERYSSFLGVPIIHYRS CCCCEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHH VLGVLVVQQAEERRFEENEVAFLVTLAAQLAGAIAHARASGGIHDIGDEPVAGDSRALRG HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCC LPGAPGVAIGTAVVPYAQSDLNAIPDRTAADPEAEVATFEAAVDQVTAELRQLGQQISGS CCCCCCCCHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC VSADEQMLFDVYLRMLEGDSLVSETVERIRAGNWAPGALRQVIGEHVQVFENMDDPYLRE CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHH RASDIRDLGRRILGRLRDEGGRVEDLPEKAVLVGHEVSASQLAEIPSDRLVGVVSATGSR HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCHHHHHHCCCCCEEEEEEECCCC NSHVAILARALGIPAVMGVDDLRTRKMDGRPVVVDGYAGRFYVDPTETVEQEYQRLIRDE CCHHHHHHHHHCCCHHCCCHHHHHCCCCCCCEEEECCCCEEEECCHHHHHHHHHHHHHHH AEFTEGLEAVRDEPAISPDGRNLALYANTGLISDINLSLAAGCDGIGLHRTEFPFLIRDR HHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEECCEEEECCCCCCCCCCCCCCEEEECC FPGEEEQADLYRRVLEQFAPKPVTLRTLDVGGDKSLAYFPIEEENPFLGWRGIRLTLDHP CCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEECCCCCCCEEEEEEEEEECCH EIFLTQLRAMLRADVGLGNLQILLPMVSRLEEIADVRRLLLRARQELAEEGIQARIPPLG HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCC VMIEVPATIYQIDRYCDQADFLSLGSNDLTQYLLAVDRNNSRVAGLYDELHPAVLGAVQH EEEECCHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHH VAQAARRHGKRLTVCGGMAGDPAGAILLMGFGIEGLSMSVSSLLRIKWVVRRVPVRRAAE HHHHHHHCCCEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHH LANRAVEMDSPEEVRRMLRRTLEEYELGGLMRAGK HHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHCCCC >Mature Secondary Structure MLEILHRVSREVNAAPNLRQGLRIIVERVADAMAVDVCSVYLLDATQGDFVLMDTRGLNT CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEECCCCCC ESVGRVRLTSAEGLVGLVAEREEPINLKNAPAHSRFRYFPETGEERYSSFLGVPIIHYRS CCCCEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHH VLGVLVVQQAEERRFEENEVAFLVTLAAQLAGAIAHARASGGIHDIGDEPVAGDSRALRG HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCC LPGAPGVAIGTAVVPYAQSDLNAIPDRTAADPEAEVATFEAAVDQVTAELRQLGQQISGS CCCCCCCCHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC VSADEQMLFDVYLRMLEGDSLVSETVERIRAGNWAPGALRQVIGEHVQVFENMDDPYLRE CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHH RASDIRDLGRRILGRLRDEGGRVEDLPEKAVLVGHEVSASQLAEIPSDRLVGVVSATGSR HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCHHHHHHCCCCCEEEEEEECCCC NSHVAILARALGIPAVMGVDDLRTRKMDGRPVVVDGYAGRFYVDPTETVEQEYQRLIRDE CCHHHHHHHHHCCCHHCCCHHHHHCCCCCCCEEEECCCCEEEECCHHHHHHHHHHHHHHH AEFTEGLEAVRDEPAISPDGRNLALYANTGLISDINLSLAAGCDGIGLHRTEFPFLIRDR HHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEECCEEEECCCCCCCCCCCCCCEEEECC FPGEEEQADLYRRVLEQFAPKPVTLRTLDVGGDKSLAYFPIEEENPFLGWRGIRLTLDHP CCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEECCCCCCCEEEEEEEEEECCH EIFLTQLRAMLRADVGLGNLQILLPMVSRLEEIADVRRLLLRARQELAEEGIQARIPPLG HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCC VMIEVPATIYQIDRYCDQADFLSLGSNDLTQYLLAVDRNNSRVAGLYDELHPAVLGAVQH EEEECCHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHH VAQAARRHGKRLTVCGGMAGDPAGAILLMGFGIEGLSMSVSSLLRIKWVVRRVPVRRAAE HHHHHHHCCCEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHH LANRAVEMDSPEEVRRMLRRTLEEYELGGLMRAGK HHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503; 7896715; 8973315 [H]