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The map label for this gene is birA [H]

Identifier: 121997666

GI number: 121997666

Start: 947661

End: 948638

Strand: Reverse

Name: birA [H]

Synonym: Hhal_0875

Alternate gene names: 121997666

Gene position: 948638-947661 (Counterclockwise)

Preceding gene: 121997667

Following gene: 121997665

Centisome position: 35.42

GC content: 74.54

Gene sequence:

>978_bases
TTGGAACACCTGGATCAGAACACCGAGACCCGCCTCCTGCGGGCGCTGAGCGACGGACGGTTCGCCTCCGGCACAGTGCT
CGGGCAGCATCTCGGTATCGGCCGTGCCGGGGTGGCGCGCGCGGTGTCCCGTCTGCGCCAGGCTGGGGTGCGCATCGACG
CCGTACGGGGCCGGGGTTACCGCATCCCCGGCGGCTACGCGGCCCTCGATCCTGCGGCTGTGCGGCGCGCCTGGGAGGCC
GTTGGCGCCCCGCCCCCGTCGCGCCTTGAATGCCTCTACCGTCCACCCTCCACCAATGCCGACGCGTTCCGGACGGCGGC
GCGCGGCACCGGCGTGGTCTTCGCCGAGGGTCAGGCCGCCGGACGCGGGCGGCTCGGGCGCGCCTGGGCCTCCCCGCTGG
GCAATATCTACTTCTCGGTCGTCCATGACTTCGACGCTGTGCCCGAGCCACCCGCCCCCCTGGCGTTGGGGGTCGCCGTG
GCTCTCGCCCACGGATTGCGTGGCGTCGGCGTGCCGGCCCGGGTCAAGTGGCCCAACGACCTATTGGTCGCCGGCTGCAA
GATCGGCGGCATCCTGACGGAGCTGCGCGGTGACCCGCTCGGCCCGTGCCGCGTGGTGATGGGGGTGGGCCTCAACCGGC
AAATGCCCGAGGTCACCGATCCCCGGGGCCTGCCGCCCGGCGCCCTGAGCGAACCGCAGGGGCCGGAGCTCGACCGCTCG
TGGTTGGCCGGCGCGGCCGCCGGCTGGGTGGCGCTCGCCGCTCGCAGGTTCGAGGCCCACGGTCTGGCCCCGCTGATCGC
TGACTGGCCGGCCCTGGACGCGCTGCACGGCCAGACCGTGGAACTCGAGGCGGCCGGGCGTACCACCCGCGGGATCGCCC
GGGGTATCGACGAGCACGGCCGACTGCGCGTCGAGACGGACCAGGGACCGGTCGCGCTCGCCAGCGGCGAGGCCCACCTG
CAGCGGAGCGCGCCATGA

Upstream 100 bases:

>100_bases
CAAAACCCCCGACGTCCCATAGGACGCCGGGGGTTTTTTTTGTCCAACGGTTCGGTATAAGAGGGACCACATTCGACCGT
AGAGGCGAGACGCCAAGGCC

Downstream 100 bases:

>100_bases
GGCTCCTGCTCGATCTCGGCAACAGCGCGATCAAGTGGGCTGTTGTCCCGCCGGGGGGCGCGGCCTGGCAGACCGGCCGC
CTGGCCTACGCCGACGGCGC

Product: biotin--acetyl-CoA-carboxylase ligase

Products: NA

Alternate protein names: Biotin operon repressor; Biotin--[acetyl-CoA-carboxylase] synthetase; Biotin--protein ligase [H]

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MEHLDQNTETRLLRALSDGRFASGTVLGQHLGIGRAGVARAVSRLRQAGVRIDAVRGRGYRIPGGYAALDPAAVRRAWEA
VGAPPPSRLECLYRPPSTNADAFRTAARGTGVVFAEGQAAGRGRLGRAWASPLGNIYFSVVHDFDAVPEPPAPLALGVAV
ALAHGLRGVGVPARVKWPNDLLVAGCKIGGILTELRGDPLGPCRVVMGVGLNRQMPEVTDPRGLPPGALSEPQGPELDRS
WLAGAAAGWVALAARRFEAHGLAPLIADWPALDALHGQTVELEAAGRTTRGIARGIDEHGRLRVETDQGPVALASGEAHL
QRSAP

Sequences:

>Translated_325_residues
MEHLDQNTETRLLRALSDGRFASGTVLGQHLGIGRAGVARAVSRLRQAGVRIDAVRGRGYRIPGGYAALDPAAVRRAWEA
VGAPPPSRLECLYRPPSTNADAFRTAARGTGVVFAEGQAAGRGRLGRAWASPLGNIYFSVVHDFDAVPEPPAPLALGVAV
ALAHGLRGVGVPARVKWPNDLLVAGCKIGGILTELRGDPLGPCRVVMGVGLNRQMPEVTDPRGLPPGALSEPQGPELDRS
WLAGAAAGWVALAARRFEAHGLAPLIADWPALDALHGQTVELEAAGRTTRGIARGIDEHGRLRVETDQGPVALASGEAHL
QRSAP
>Mature_325_residues
MEHLDQNTETRLLRALSDGRFASGTVLGQHLGIGRAGVARAVSRLRQAGVRIDAVRGRGYRIPGGYAALDPAAVRRAWEA
VGAPPPSRLECLYRPPSTNADAFRTAARGTGVVFAEGQAAGRGRLGRAWASPLGNIYFSVVHDFDAVPEPPAPLALGVAV
ALAHGLRGVGVPARVKWPNDLLVAGCKIGGILTELRGDPLGPCRVVMGVGLNRQMPEVTDPRGLPPGALSEPQGPELDRS
WLAGAAAGWVALAARRFEAHGLAPLIADWPALDALHGQTVELEAAGRTTRGIARGIDEHGRLRVETDQGPVALASGEAHL
QRSAP

Specific function: BirA acts both as a biotin-operon repressor and as the enzyme that synthesizes the corepressor, acetyl-CoA:carbon-dioxide ligase. This protein also activates biotin to form biotinyl-5'- adenylate and transfers the biotin moiety to biotin-accepting protein

COG id: COG0340

COG function: function code H; Biotin-(acetyl-CoA carboxylase) ligase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the biotin--protein ligase family [H]

Homologues:

Organism=Escherichia coli, GI1790408, Length=307, Percent_Identity=33.8762214983713, Blast_Score=150, Evalue=1e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004408
- InterPro:   IPR004409
- InterPro:   IPR003142
- InterPro:   IPR004143
- InterPro:   IPR013196
- InterPro:   IPR008988
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02237 BPL_C; PF03099 BPL_LipA_LipB; PF08279 HTH_11 [H]

EC number: =6.3.4.15 [H]

Molecular weight: Translated: 34041; Mature: 34041

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHLDQNTETRLLRALSDGRFASGTVLGQHLGIGRAGVARAVSRLRQAGVRIDAVRGRGY
CCCCCCCHHHHHHHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCEEEEECCCCE
RIPGGYAALDPAAVRRAWEAVGAPPPSRLECLYRPPSTNADAFRTAARGTGVVFAEGQAA
ECCCCCCCCCHHHHHHHHHHHCCCCCHHCEEEECCCCCCHHHHHHHHCCCEEEEECCCCC
GRGRLGRAWASPLGNIYFSVVHDFDAVPEPPAPLALGVAVALAHGLRGVGVPARVKWPND
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEECCCC
LLVAGCKIGGILTELRGDPLGPCRVVMGVGLNRQMPEVTDPRGLPPGALSEPQGPELDRS
EEEECCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
WLAGAAAGWVALAARRFEAHGLAPLIADWPALDALHGQTVELEAAGRTTRGIARGIDEHG
HHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHCCCEEEEEECCCHHHHHHHCCCCCC
RLRVETDQGPVALASGEAHLQRSAP
CEEEECCCCCEEEECCHHHHCCCCC
>Mature Secondary Structure
MEHLDQNTETRLLRALSDGRFASGTVLGQHLGIGRAGVARAVSRLRQAGVRIDAVRGRGY
CCCCCCCHHHHHHHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCEEEEECCCCE
RIPGGYAALDPAAVRRAWEAVGAPPPSRLECLYRPPSTNADAFRTAARGTGVVFAEGQAA
ECCCCCCCCCHHHHHHHHHHHCCCCCHHCEEEECCCCCCHHHHHHHHCCCEEEEECCCCC
GRGRLGRAWASPLGNIYFSVVHDFDAVPEPPAPLALGVAVALAHGLRGVGVPARVKWPND
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEECCCC
LLVAGCKIGGILTELRGDPLGPCRVVMGVGLNRQMPEVTDPRGLPPGALSEPQGPELDRS
EEEECCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
WLAGAAAGWVALAARRFEAHGLAPLIADWPALDALHGQTVELEAAGRTTRGIARGIDEHG
HHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHCCCEEEEEECCCHHHHHHHCCCCCC
RLRVETDQGPVALASGEAHLQRSAP
CEEEECCCCCEEEECCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3899863; 3536662; 8265357; 9278503; 1311302; 1328157; 1409631; 11353844 [H]