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The map label for this gene is secE

Identifier: 121997662

GI number: 121997662

Start: 944057

End: 944467

Strand: Reverse

Name: secE

Synonym: Hhal_0871

Alternate gene names: 121997662

Gene position: 944467-944057 (Counterclockwise)

Preceding gene: 121997663

Following gene: 121997661

Centisome position: 35.26

GC content: 64.96

Gene sequence:

>411_bases
ATGGCTCGCCGGACCGCTTCGGTAGCAGGGTCCATGAAGTCAAAGGCAGAGACTGCGAAATCCCCGCTTGACGTCGTTAA
GTGGGTCGTAGCCATCGCCCTCGCGCTCGGGGCCGTGGCCGGGTTCTACGTCTTCGGTGACGAGCCGCTCCTCTACCGCG
TTGCCGGTCTGTTGGCCGTTGTCGGCGTCGCCGTCGCCGTCCTCGCTACCACTGCACAGGGGCGCAGCGTCTGGTCGTTC
GCCCAGGGCGCCAAGCAGGAGGTGCGCAAGGTCGTCTGGCCCACCCGGCAGGAGACCCTGCAAACGACGCTGATTGTTGC
CGCGGTGGTGATTATTGTGGCCATCTTCCTCTGGCTGATGGACCTGCTGCTGCTTTGGCTGGTCGGCATGATCACCGGCC
ACGGAGGCTGA

Upstream 100 bases:

>100_bases
AGGCCAGTAGCTCAATTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGGGGGTTCGAGTCCCTCCTGGCCTGCCAACTT
CACGACGCGGTCCGGCGGGC

Downstream 100 bases:

>100_bases
CGCATGGCACTGCGCTGGTACGTAATCCACGCCTATTCGGGCTTCGAGAAGCAGGTTCAGCGTTCCCTTCAGGAGCGCAT
CCGGCGCGCTGGCATGGAAG

Product: preprotein translocase subunit SecE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 135

Protein sequence:

>136_residues
MARRTASVAGSMKSKAETAKSPLDVVKWVVAIALALGAVAGFYVFGDEPLLYRVAGLLAVVGVAVAVLATTAQGRSVWSF
AQGAKQEVRKVVWPTRQETLQTTLIVAAVVIIVAIFLWLMDLLLLWLVGMITGHGG

Sequences:

>Translated_136_residues
MARRTASVAGSMKSKAETAKSPLDVVKWVVAIALALGAVAGFYVFGDEPLLYRVAGLLAVVGVAVAVLATTAQGRSVWSF
AQGAKQEVRKVVWPTRQETLQTTLIVAAVVIIVAIFLWLMDLLLLWLVGMITGHGG
>Mature_135_residues
ARRTASVAGSMKSKAETAKSPLDVVKWVVAIALALGAVAGFYVFGDEPLLYRVAGLLAVVGVAVAVLATTAQGRSVWSFA
QGAKQEVRKVVWPTRQETLQTTLIVAAVVIIVAIFLWLMDLLLLWLVGMITGHGG

Specific function: Essential for protein export [H]

COG id: COG0690

COG function: function code U; Preprotein translocase subunit SecE

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secE/SEC61-gamma family [H]

Homologues:

Organism=Escherichia coli, GI1790413, Length=123, Percent_Identity=43.0894308943089, Blast_Score=85, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001901
- InterPro:   IPR005807 [H]

Pfam domain/function: PF00584 SecE [H]

EC number: NA

Molecular weight: Translated: 14419; Mature: 14288

Theoretical pI: Translated: 10.62; Mature: 10.62

Prosite motif: PS01067 SECE_SEC61G

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARRTASVAGSMKSKAETAKSPLDVVKWVVAIALALGAVAGFYVFGDEPLLYRVAGLLAV
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
VGVAVAVLATTAQGRSVWSFAQGAKQEVRKVVWPTRQETLQTTLIVAAVVIIVAIFLWLM
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DLLLLWLVGMITGHGG
HHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ARRTASVAGSMKSKAETAKSPLDVVKWVVAIALALGAVAGFYVFGDEPLLYRVAGLLAV
CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
VGVAVAVLATTAQGRSVWSFAQGAKQEVRKVVWPTRQETLQTTLIVAAVVIIVAIFLWLM
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DLLLLWLVGMITGHGG
HHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]