| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is 121997594
Identifier: 121997594
GI number: 121997594
Start: 884800
End: 885348
Strand: Reverse
Name: 121997594
Synonym: Hhal_0803
Alternate gene names: NA
Gene position: 885348-884800 (Counterclockwise)
Preceding gene: 121997596
Following gene: 121997592
Centisome position: 33.05
GC content: 68.85
Gene sequence:
>549_bases ATGAAACGCATACGTAAACTTTGGCACGCCACCGTGGACCTGCTTGAGGGGGCATTCCTCAACGGCTGGCAGGCGTTTTT CCAGACGGTGGGCTACTACCGGCTGATCCCGATCGAGCCGGGCGTCCTCTACCGCACCACCGAGATGCCGCCCCAGCGCC TGGTGGCGCTGTGCCGGGCGCAGGGCGTGCGTACCGTGATCGACCTGCGCCGCAAGGCCCATCGGGCCGAGGCCGAGGCG GCAGCGCTCGAGCCGGCCGGGATCCGCCACGTGCATCTCCCCTCGGCGCAGGTGCCCGATGCATCCACGGTGGCGGCGTT CCTCGAGCTGATGGACGACCCCGCCAACGGGCCCGTGGTGATCCACTGCGTCCACGGTGTCGGCCGCACGGGCGCATTGA TGGCGGTCTACCTCATGGAGTACCGCGGCCTGGACAACGAATCGGCCCGGCGGGCGGCCAAGCGCATCGGTGGTTTCCAG AGTTTCGGGCGCGGACGGCCGAAAGGCGAGTTCGTGCTGCACTACGCACCCCGCCCGAGGAGCGCGTAA
Upstream 100 bases:
>100_bases GCAGCAGCCGGGTCGCGGGGGGTGTCCATCACAGCGGGTTCTATTCCTGAGCAGGGTGTCGGCGTAGGATACGCGCCAGC CCCAGACAATTGCATCGATC
Downstream 100 bases:
>100_bases CCCGGCGCCTGGGGGGGGGCGCTAGCGGGTCTCGAGGACGCGTTCCCGCCATCGCCGGGCGGTCGCCGCCAGTCGATCAC CCGCGCGGGCGCCGCGGCCA
Product: dual specificity protein phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MKRIRKLWHATVDLLEGAFLNGWQAFFQTVGYYRLIPIEPGVLYRTTEMPPQRLVALCRAQGVRTVIDLRRKAHRAEAEA AALEPAGIRHVHLPSAQVPDASTVAAFLELMDDPANGPVVIHCVHGVGRTGALMAVYLMEYRGLDNESARRAAKRIGGFQ SFGRGRPKGEFVLHYAPRPRSA
Sequences:
>Translated_182_residues MKRIRKLWHATVDLLEGAFLNGWQAFFQTVGYYRLIPIEPGVLYRTTEMPPQRLVALCRAQGVRTVIDLRRKAHRAEAEA AALEPAGIRHVHLPSAQVPDASTVAAFLELMDDPANGPVVIHCVHGVGRTGALMAVYLMEYRGLDNESARRAAKRIGGFQ SFGRGRPKGEFVLHYAPRPRSA >Mature_182_residues MKRIRKLWHATVDLLEGAFLNGWQAFFQTVGYYRLIPIEPGVLYRTTEMPPQRLVALCRAQGVRTVIDLRRKAHRAEAEA AALEPAGIRHVHLPSAQVPDASTVAAFLELMDDPANGPVVIHCVHGVGRTGALMAVYLMEYRGLDNESARRAAKRIGGFQ SFGRGRPKGEFVLHYAPRPRSA
Specific function: Unknown
COG id: COG2365
COG function: function code T; Protein tyrosine/serine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20210; Mature: 20210
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: PS00383 TYR_PHOSPHATASE_1 ; PS50056 TYR_PHOSPHATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRIRKLWHATVDLLEGAFLNGWQAFFQTVGYYRLIPIEPGVLYRTTEMPPQRLVALCRA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCCCHHHHHHHHHH QGVRTVIDLRRKAHRAEAEAAALEPAGIRHVHLPSAQVPDASTVAAFLELMDDPANGPVV CCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEE IHCVHGVGRTGALMAVYLMEYRGLDNESARRAAKRIGGFQSFGRGRPKGEFVLHYAPRPR EEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHCCCCCCCCEEEEECCCCC SA CC >Mature Secondary Structure MKRIRKLWHATVDLLEGAFLNGWQAFFQTVGYYRLIPIEPGVLYRTTEMPPQRLVALCRA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCCCHHHHHHHHHH QGVRTVIDLRRKAHRAEAEAAALEPAGIRHVHLPSAQVPDASTVAAFLELMDDPANGPVV CCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEE IHCVHGVGRTGALMAVYLMEYRGLDNESARRAAKRIGGFQSFGRGRPKGEFVLHYAPRPR EEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHCCCCCCCCEEEEECCCCC SA CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA