| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is 121997592
Identifier: 121997592
GI number: 121997592
Start: 883053
End: 883883
Strand: Reverse
Name: 121997592
Synonym: Hhal_0801
Alternate gene names: NA
Gene position: 883883-883053 (Counterclockwise)
Preceding gene: 121997594
Following gene: 121997591
Centisome position: 33.0
GC content: 67.75
Gene sequence:
>831_bases ATGCAGGAGAGTGGTACGGTACCGTCGCTTGATCACGAAGCGGCCCATCGAAGCCCCGTCATGTCCGATATCACGGCCCT GAACCTCCCGGCCCGCCTGCGCCGTTCCCGGCGGGCCCTGGCCAGCAGCGCACTGCGCCCGATCTGCCGGGCCTCCACCC GCCTCGCTGCTCGACGCCTGGGGCTGCGCAAGCCGGACGCCAGTCTCCTTCCCGCCAAGAAGCGCAGTATTCGGGTGCCG CTGGCGAGCATCGCACACTACTACGCGGATGTGCCGAGCTACATCCTCGGTGGCTACCAGCTCATTGCCGGACCCTGGGA CCGTCTGGTCTATCCGCTGGCGACGGACCCCACCTGGCGCGAGGCTTGCCGGCACAGCCGGACCATCTACCAGATCTTCG AGCAGGGGCTGCCCATCGAGCAGACCGACGAGTACCGCAAGCTCTATCGAAAGATGGTTCAGGGGAAGTCGGTTCGCAAA GGGATCAAGCGGGAGCAGGAGCTCCAGGCTTACTTCCAGCGGATGTTCGATGCCTACGAGAACATGCGCGCCAATGGCTT CCTCGGCCAGCAGGAGCTCGGCGGAGAGCCGAAGGACGACGTCCGCGTGGCCATCGATCGCCACGGACGGCTGGTGCGTC TGGGCAACGGCCGCCACCGTTTCGCCATGGCGCAGATCCTGGCGGTGCCCACGGTGGTCGTGCACGTCCGCCATGTGCAC AGCCGCTGGGTGGAGGGGTGCATGCGCGCGTACCAGGAGCCGGATCCGGGCGAGGCGGTGCGACGGGGGCTGGCGGCCTA CACCCTGGGCGTGGCGGGCGATGCCGCCTAA
Upstream 100 bases:
>100_bases GGTGTGGCAACGCATGCTGGCTCCGCTTCGTCCGCGCCGACGGCCCAGTCTAGCGGTTGTTCCCGGCCGGATCACGCGGC TCGGGCGGCCTTCGCTCAAC
Downstream 100 bases:
>100_bases CTCGAAAAGCCGAGCGTGATAAAGTACGGGCCTTCGTTCCACGTTGCTAGGTTCGACGTCCGTGCAGTACCTCCAAGCCC GTATTCAGTCCGAAACCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MQESGTVPSLDHEAAHRSPVMSDITALNLPARLRRSRRALASSALRPICRASTRLAARRLGLRKPDASLLPAKKRSIRVP LASIAHYYADVPSYILGGYQLIAGPWDRLVYPLATDPTWREACRHSRTIYQIFEQGLPIEQTDEYRKLYRKMVQGKSVRK GIKREQELQAYFQRMFDAYENMRANGFLGQQELGGEPKDDVRVAIDRHGRLVRLGNGRHRFAMAQILAVPTVVVHVRHVH SRWVEGCMRAYQEPDPGEAVRRGLAAYTLGVAGDAA
Sequences:
>Translated_276_residues MQESGTVPSLDHEAAHRSPVMSDITALNLPARLRRSRRALASSALRPICRASTRLAARRLGLRKPDASLLPAKKRSIRVP LASIAHYYADVPSYILGGYQLIAGPWDRLVYPLATDPTWREACRHSRTIYQIFEQGLPIEQTDEYRKLYRKMVQGKSVRK GIKREQELQAYFQRMFDAYENMRANGFLGQQELGGEPKDDVRVAIDRHGRLVRLGNGRHRFAMAQILAVPTVVVHVRHVH SRWVEGCMRAYQEPDPGEAVRRGLAAYTLGVAGDAA >Mature_276_residues MQESGTVPSLDHEAAHRSPVMSDITALNLPARLRRSRRALASSALRPICRASTRLAARRLGLRKPDASLLPAKKRSIRVP LASIAHYYADVPSYILGGYQLIAGPWDRLVYPLATDPTWREACRHSRTIYQIFEQGLPIEQTDEYRKLYRKMVQGKSVRK GIKREQELQAYFQRMFDAYENMRANGFLGQQELGGEPKDDVRVAIDRHGRLVRLGNGRHRFAMAQILAVPTVVVHVRHVH SRWVEGCMRAYQEPDPGEAVRRGLAAYTLGVAGDAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31148; Mature: 31148
Theoretical pI: Translated: 10.60; Mature: 10.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQESGTVPSLDHEAAHRSPVMSDITALNLPARLRRSRRALASSALRPICRASTRLAARRL CCCCCCCCCCCHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLRKPDASLLPAKKRSIRVPLASIAHYYADVPSYILGGYQLIAGPWDRLVYPLATDPTWR CCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCHHHCCCCHHHCEECCCCCCCHH EACRHSRTIYQIFEQGLPIEQTDEYRKLYRKMVQGKSVRKGIKREQELQAYFQRMFDAYE HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH NMRANGFLGQQELGGEPKDDVRVAIDRHGRLVRLGNGRHRFAMAQILAVPTVVVHVRHVH CCCCCCCCCHHHHCCCCCHHHEEHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHH SRWVEGCMRAYQEPDPGEAVRRGLAAYTLGVAGDAA HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MQESGTVPSLDHEAAHRSPVMSDITALNLPARLRRSRRALASSALRPICRASTRLAARRL CCCCCCCCCCCHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLRKPDASLLPAKKRSIRVPLASIAHYYADVPSYILGGYQLIAGPWDRLVYPLATDPTWR CCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCHHHCCCCHHHCEECCCCCCCHH EACRHSRTIYQIFEQGLPIEQTDEYRKLYRKMVQGKSVRKGIKREQELQAYFQRMFDAYE HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH NMRANGFLGQQELGGEPKDDVRVAIDRHGRLVRLGNGRHRFAMAQILAVPTVVVHVRHVH CCCCCCCCCHHHHCCCCCHHHEEHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHH SRWVEGCMRAYQEPDPGEAVRRGLAAYTLGVAGDAA HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA