Definition Halorhodospira halophila SL1 chromosome, complete genome.
Accession NC_008789
Length 2,678,452

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The map label for this gene is 121997592

Identifier: 121997592

GI number: 121997592

Start: 883053

End: 883883

Strand: Reverse

Name: 121997592

Synonym: Hhal_0801

Alternate gene names: NA

Gene position: 883883-883053 (Counterclockwise)

Preceding gene: 121997594

Following gene: 121997591

Centisome position: 33.0

GC content: 67.75

Gene sequence:

>831_bases
ATGCAGGAGAGTGGTACGGTACCGTCGCTTGATCACGAAGCGGCCCATCGAAGCCCCGTCATGTCCGATATCACGGCCCT
GAACCTCCCGGCCCGCCTGCGCCGTTCCCGGCGGGCCCTGGCCAGCAGCGCACTGCGCCCGATCTGCCGGGCCTCCACCC
GCCTCGCTGCTCGACGCCTGGGGCTGCGCAAGCCGGACGCCAGTCTCCTTCCCGCCAAGAAGCGCAGTATTCGGGTGCCG
CTGGCGAGCATCGCACACTACTACGCGGATGTGCCGAGCTACATCCTCGGTGGCTACCAGCTCATTGCCGGACCCTGGGA
CCGTCTGGTCTATCCGCTGGCGACGGACCCCACCTGGCGCGAGGCTTGCCGGCACAGCCGGACCATCTACCAGATCTTCG
AGCAGGGGCTGCCCATCGAGCAGACCGACGAGTACCGCAAGCTCTATCGAAAGATGGTTCAGGGGAAGTCGGTTCGCAAA
GGGATCAAGCGGGAGCAGGAGCTCCAGGCTTACTTCCAGCGGATGTTCGATGCCTACGAGAACATGCGCGCCAATGGCTT
CCTCGGCCAGCAGGAGCTCGGCGGAGAGCCGAAGGACGACGTCCGCGTGGCCATCGATCGCCACGGACGGCTGGTGCGTC
TGGGCAACGGCCGCCACCGTTTCGCCATGGCGCAGATCCTGGCGGTGCCCACGGTGGTCGTGCACGTCCGCCATGTGCAC
AGCCGCTGGGTGGAGGGGTGCATGCGCGCGTACCAGGAGCCGGATCCGGGCGAGGCGGTGCGACGGGGGCTGGCGGCCTA
CACCCTGGGCGTGGCGGGCGATGCCGCCTAA

Upstream 100 bases:

>100_bases
GGTGTGGCAACGCATGCTGGCTCCGCTTCGTCCGCGCCGACGGCCCAGTCTAGCGGTTGTTCCCGGCCGGATCACGCGGC
TCGGGCGGCCTTCGCTCAAC

Downstream 100 bases:

>100_bases
CTCGAAAAGCCGAGCGTGATAAAGTACGGGCCTTCGTTCCACGTTGCTAGGTTCGACGTCCGTGCAGTACCTCCAAGCCC
GTATTCAGTCCGAAACCCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MQESGTVPSLDHEAAHRSPVMSDITALNLPARLRRSRRALASSALRPICRASTRLAARRLGLRKPDASLLPAKKRSIRVP
LASIAHYYADVPSYILGGYQLIAGPWDRLVYPLATDPTWREACRHSRTIYQIFEQGLPIEQTDEYRKLYRKMVQGKSVRK
GIKREQELQAYFQRMFDAYENMRANGFLGQQELGGEPKDDVRVAIDRHGRLVRLGNGRHRFAMAQILAVPTVVVHVRHVH
SRWVEGCMRAYQEPDPGEAVRRGLAAYTLGVAGDAA

Sequences:

>Translated_276_residues
MQESGTVPSLDHEAAHRSPVMSDITALNLPARLRRSRRALASSALRPICRASTRLAARRLGLRKPDASLLPAKKRSIRVP
LASIAHYYADVPSYILGGYQLIAGPWDRLVYPLATDPTWREACRHSRTIYQIFEQGLPIEQTDEYRKLYRKMVQGKSVRK
GIKREQELQAYFQRMFDAYENMRANGFLGQQELGGEPKDDVRVAIDRHGRLVRLGNGRHRFAMAQILAVPTVVVHVRHVH
SRWVEGCMRAYQEPDPGEAVRRGLAAYTLGVAGDAA
>Mature_276_residues
MQESGTVPSLDHEAAHRSPVMSDITALNLPARLRRSRRALASSALRPICRASTRLAARRLGLRKPDASLLPAKKRSIRVP
LASIAHYYADVPSYILGGYQLIAGPWDRLVYPLATDPTWREACRHSRTIYQIFEQGLPIEQTDEYRKLYRKMVQGKSVRK
GIKREQELQAYFQRMFDAYENMRANGFLGQQELGGEPKDDVRVAIDRHGRLVRLGNGRHRFAMAQILAVPTVVVHVRHVH
SRWVEGCMRAYQEPDPGEAVRRGLAAYTLGVAGDAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31148; Mature: 31148

Theoretical pI: Translated: 10.60; Mature: 10.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQESGTVPSLDHEAAHRSPVMSDITALNLPARLRRSRRALASSALRPICRASTRLAARRL
CCCCCCCCCCCHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLRKPDASLLPAKKRSIRVPLASIAHYYADVPSYILGGYQLIAGPWDRLVYPLATDPTWR
CCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCHHHCCCCHHHCEECCCCCCCHH
EACRHSRTIYQIFEQGLPIEQTDEYRKLYRKMVQGKSVRKGIKREQELQAYFQRMFDAYE
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
NMRANGFLGQQELGGEPKDDVRVAIDRHGRLVRLGNGRHRFAMAQILAVPTVVVHVRHVH
CCCCCCCCCHHHHCCCCCHHHEEHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
SRWVEGCMRAYQEPDPGEAVRRGLAAYTLGVAGDAA
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MQESGTVPSLDHEAAHRSPVMSDITALNLPARLRRSRRALASSALRPICRASTRLAARRL
CCCCCCCCCCCHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLRKPDASLLPAKKRSIRVPLASIAHYYADVPSYILGGYQLIAGPWDRLVYPLATDPTWR
CCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCHHHCCCCHHHCEECCCCCCCHH
EACRHSRTIYQIFEQGLPIEQTDEYRKLYRKMVQGKSVRKGIKREQELQAYFQRMFDAYE
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
NMRANGFLGQQELGGEPKDDVRVAIDRHGRLVRLGNGRHRFAMAQILAVPTVVVHVRHVH
CCCCCCCCCHHHHCCCCCHHHEEHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
SRWVEGCMRAYQEPDPGEAVRRGLAAYTLGVAGDAA
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA