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The map label for this gene is 121997587

Identifier: 121997587

GI number: 121997587

Start: 877425

End: 877664

Strand: Reverse

Name: 121997587

Synonym: Hhal_0796

Alternate gene names: NA

Gene position: 877664-877425 (Counterclockwise)

Preceding gene: 121997591

Following gene: 121997586

Centisome position: 32.77

GC content: 61.25

Gene sequence:

>240_bases
GTGGAAGAAAAGCGCACGGTCCGGATCTTCCGTAACGGGCGGAATCAGGCCGTCAGGATCCCTCGCGGCTTCGAGCTGGA
TAGTGATGAGGCTGTGCTTCGCCGCGAAGGAGATTGCCTGATCCTGGAGCCTGTCCGCCGAAAAGGTTTGATCGCCACCC
TGGACGGCCTCGAGGACCTCGATGAGTCTTTCCCGGATGTGGATGCCGAGCTGCCTCCCAACGACCCGGTCGAGCTCTAA

Upstream 100 bases:

>100_bases
ATTTGTGCCGAAGTGTCTTCAAAAGGGGAGTGGGTTTCGTTGACGTACCATTCGCAGGGGGGCGTATGCTCTGGGCATAT
GCCGATGACCCGGAGGTGTC

Downstream 100 bases:

>100_bases
GGATGGTGCCGAGCTACCTGCTCGATACCAACATGGTCTCGGCGCTGATTACGCGACCGCGCGGTGCCGTGGCCAACCGG
GTTCGGGGCGTTGGTGAGGT

Product: virulence-associated protein VapB-like protein

Products: NA

Alternate protein names: SpoVT/AbrB-Like Protein; SpoVT/AbrB-Like; SpoVT/AbrB Domain-Containing Protein; NtrP Protein; SpoVT/AbrB Family Protein; Virulence-Associated Protein VapB-Like; SpoVT/AbrB Domain Protein; Virulence-Associated Protein

Number of amino acids: Translated: 79; Mature: 79

Protein sequence:

>79_residues
MEEKRTVRIFRNGRNQAVRIPRGFELDSDEAVLRREGDCLILEPVRRKGLIATLDGLEDLDESFPDVDAELPPNDPVEL

Sequences:

>Translated_79_residues
MEEKRTVRIFRNGRNQAVRIPRGFELDSDEAVLRREGDCLILEPVRRKGLIATLDGLEDLDESFPDVDAELPPNDPVEL
>Mature_79_residues
MEEKRTVRIFRNGRNQAVRIPRGFELDSDEAVLRREGDCLILEPVRRKGLIATLDGLEDLDESFPDVDAELPPNDPVEL

Specific function: Unknown

COG id: COG4456

COG function: function code S; Virulence-associated protein and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9017; Mature: 9017

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEKRTVRIFRNGRNQAVRIPRGFELDSDEAVLRREGDCLILEPVRRKGLIATLDGLEDL
CCCCCEEEEEECCCCCEEECCCCCCCCCCCHHEECCCCEEEECCCCCCCEEEECCCHHHH
DESFPDVDAELPPNDPVEL
HHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEEKRTVRIFRNGRNQAVRIPRGFELDSDEAVLRREGDCLILEPVRRKGLIATLDGLEDL
CCCCCEEEEEECCCCCEEECCCCCCCCCCCHHEECCCCEEEECCCCCCCEEEECCCHHHH
DESFPDVDAELPPNDPVEL
HHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA