Definition Halorhodospira halophila SL1 chromosome, complete genome.
Accession NC_008789
Length 2,678,452

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The map label for this gene is 121997591

Identifier: 121997591

GI number: 121997591

Start: 882113

End: 882991

Strand: Reverse

Name: 121997591

Synonym: Hhal_0800

Alternate gene names: NA

Gene position: 882991-882113 (Counterclockwise)

Preceding gene: 121997592

Following gene: 121997587

Centisome position: 32.97

GC content: 67.35

Gene sequence:

>879_bases
GTGCAGTACCTCCAAGCCCGTATTCAGTCCGAAACCCACCAGGACCCGGCTATTGCCCATGCGCAGGGCGAAGACGGTGC
CCTGTGGCTGACCGACAGCCGCGTGCTGACCCCGGCAGAGCTGGCGGAGTGGCTGCCGCGCTGGGAGGCCGAGTTGCCCG
TACGCGGCGAGTTGTTGGCTTCTCGGCGGCGCCACGATGTCTATCGTCTGGATACGGAGGAGTTTGGTCCGCTGGTGCTC
AAGTACACCAACCCCGGCAAGACCAAGCGACGTTCGGCGGTGGCGGCCTGGCTAACCGGGCGACGCCTTGACCGGGCGCT
GCCGGGTGTCGTTGCTCAGCCGCTCGGCGCAGTGGATCGCTACCAAGGGGATGCTGTCGTCGCCGCCTGCCTCATCTGCC
GCTACGTCGACGCCCAGCCGCTGCCGGAACCGGACGAGGGTGCGGAGCTGGGCGAGCTGGCGGATCGGGTGGGGCGCTTC
CAGGCCCGGCTCCACGCCAGCGGCGTCTATCTACAGGATTGCCGAATGGGGAATATGCTGGCCGTTGCCAGCGTTGCGGA
AGGGGGGGAGGAGGGCGCCGAGACAGAGGGGCTGACCATCGTCGACCTGGAGGCGCTGGCCGAGGGGCGGCCGAGCTGCT
TCAACGCCGCCCGTCTGCTCCTCAAGCTGCGACTTTCGCACGAGGACTTCGCCCGCGTCTGGGCAGCCTACGTGGAGAAG
CGGGGTGCGGACCTGGGTCATGCGGAGCGGTTCGTGCTGTGGTGGATTTATTTGCCGTTGCGTCGGGTGCGCCATAAGGG
GCTGCGGTTTTATCGTGGCTGCCTGCGGCCAATGTTCGGGCTCTCGAGGCATGGCACGGGATCTAGAACCAGCGCCTAG

Upstream 100 bases:

>100_bases
GCGGCCTACACCCTGGGCGTGGCGGGCGATGCCGCCTAACTCGAAAAGCCGAGCGTGATAAAGTACGGGCCTTCGTTCCA
CGTTGCTAGGTTCGACGTCC

Downstream 100 bases:

>100_bases
CGCGCTATGCACGATCCATCGTCCAAATCAAAATCGTATTCGCATAATACCCGGTGTTCTCGTGCTCGTACCGTCTCTAG
CCTGTTTGGCGATACCAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MQYLQARIQSETHQDPAIAHAQGEDGALWLTDSRVLTPAELAEWLPRWEAELPVRGELLASRRRHDVYRLDTEEFGPLVL
KYTNPGKTKRRSAVAAWLTGRRLDRALPGVVAQPLGAVDRYQGDAVVAACLICRYVDAQPLPEPDEGAELGELADRVGRF
QARLHASGVYLQDCRMGNMLAVASVAEGGEEGAETEGLTIVDLEALAEGRPSCFNAARLLLKLRLSHEDFARVWAAYVEK
RGADLGHAERFVLWWIYLPLRRVRHKGLRFYRGCLRPMFGLSRHGTGSRTSA

Sequences:

>Translated_292_residues
MQYLQARIQSETHQDPAIAHAQGEDGALWLTDSRVLTPAELAEWLPRWEAELPVRGELLASRRRHDVYRLDTEEFGPLVL
KYTNPGKTKRRSAVAAWLTGRRLDRALPGVVAQPLGAVDRYQGDAVVAACLICRYVDAQPLPEPDEGAELGELADRVGRF
QARLHASGVYLQDCRMGNMLAVASVAEGGEEGAETEGLTIVDLEALAEGRPSCFNAARLLLKLRLSHEDFARVWAAYVEK
RGADLGHAERFVLWWIYLPLRRVRHKGLRFYRGCLRPMFGLSRHGTGSRTSA
>Mature_292_residues
MQYLQARIQSETHQDPAIAHAQGEDGALWLTDSRVLTPAELAEWLPRWEAELPVRGELLASRRRHDVYRLDTEEFGPLVL
KYTNPGKTKRRSAVAAWLTGRRLDRALPGVVAQPLGAVDRYQGDAVVAACLICRYVDAQPLPEPDEGAELGELADRVGRF
QARLHASGVYLQDCRMGNMLAVASVAEGGEEGAETEGLTIVDLEALAEGRPSCFNAARLLLKLRLSHEDFARVWAAYVEK
RGADLGHAERFVLWWIYLPLRRVRHKGLRFYRGCLRPMFGLSRHGTGSRTSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32593; Mature: 32593

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQYLQARIQSETHQDPAIAHAQGEDGALWLTDSRVLTPAELAEWLPRWEAELPVRGELLA
CCHHHHHHHHHCCCCCCEEECCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCHHHHHH
SRRRHDVYRLDTEEFGPLVLKYTNPGKTKRRSAVAAWLTGRRLDRALPGVVAQPLGAVDR
HHHHCCEEEECHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
YQGDAVVAACLICRYVDAQPLPEPDEGAELGELADRVGRFQARLHASGVYLQDCRMGNML
CCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCH
AVASVAEGGEEGAETEGLTIVDLEALAEGRPSCFNAARLLLKLRLSHEDFARVWAAYVEK
HHHHHHCCCCCCCCCCCEEEEEHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
RGADLGHAERFVLWWIYLPLRRVRHKGLRFYRGCLRPMFGLSRHGTGSRTSA
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MQYLQARIQSETHQDPAIAHAQGEDGALWLTDSRVLTPAELAEWLPRWEAELPVRGELLA
CCHHHHHHHHHCCCCCCEEECCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCHHHHHH
SRRRHDVYRLDTEEFGPLVLKYTNPGKTKRRSAVAAWLTGRRLDRALPGVVAQPLGAVDR
HHHHCCEEEECHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
YQGDAVVAACLICRYVDAQPLPEPDEGAELGELADRVGRFQARLHASGVYLQDCRMGNML
CCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCH
AVASVAEGGEEGAETEGLTIVDLEALAEGRPSCFNAARLLLKLRLSHEDFARVWAAYVEK
HHHHHHCCCCCCCCCCCEEEEEHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
RGADLGHAERFVLWWIYLPLRRVRHKGLRFYRGCLRPMFGLSRHGTGSRTSA
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA