| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is apl [H]
Identifier: 121997532
GI number: 121997532
Start: 824151
End: 824756
Strand: Reverse
Name: apl [H]
Synonym: Hhal_0736
Alternate gene names: 121997532
Gene position: 824756-824151 (Counterclockwise)
Preceding gene: 121997536
Following gene: 121997531
Centisome position: 30.79
GC content: 69.14
Gene sequence:
>606_bases ATGCCGGAACTCATCGTCGACGCGGTCGAGCTGCTGGGCTGGTTGGGGATCTTTGCGGTGATGATCGTGCTCGCCCCCGA GGCGGTCATGCCCTTCCTCGGCTACGCCGTCTACCAGGCCGAGCTCAACCCGGTGACCGTGTTGGCTGCCGCCAGCCTGG GGGCCACCCTGGGGTCAACGCTGATCTACCTGGTGGTGCGGGCGGTCGGCGATGCGCGGGCCCGCCGGTGGGTCCGCCGG GGCAGCCGCTGGTACCTGATCCAAGAGCGCGATCTGGAGGTGACCCATCGGGTCTTCCGCCGGCACGGGGCGTGGATCGT GCTCTTCGGGCGCTTTGTACCCACCGTGCGCAGCCTGGTCTCCATCCCGGCCGGGCTGTTGCCGATGCGGCTGGTTCCGT TCCTGCTGCTGACCCTGCTCGGCACCACATTGTGGAACGGCGTCCTCCTCGCCGCCGGGTACGCCACCGGCTCCAACTGG GCCCGTGTGGAGGCCTACCTGGGCACCTACGGCACCGTGGTGACGCTGTTGCTTCTGGTCGCCGTTGCCGGGTTGTTGCT GTACCGGCTGCGCAACCTCGTGCTGCGCCACCGGCGTGCCGGTTGA
Upstream 100 bases:
>100_bases TTACACCGGTTGCCCGGGTGGGGCAGGGAGCGGCTGGTACCCTGTATCAGGGCCGGTCGAGGCCGGTCCGACGTGCACCA ACCGGGAGGGATCGCTGCGC
Downstream 100 bases:
>100_bases CCGGTGGCGGGCGGATGGGTACAAGTTAGGCGCCGGCCCCGGTAGCTCAGCCGGATAGAGCAATCGCCTCCTAAGCGATA GGTCGCAGGTTCGAATCCTG
Product: alkaline phosphatase
Products: alcohol; phosphate
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MPELIVDAVELLGWLGIFAVMIVLAPEAVMPFLGYAVYQAELNPVTVLAAASLGATLGSTLIYLVVRAVGDARARRWVRR GSRWYLIQERDLEVTHRVFRRHGAWIVLFGRFVPTVRSLVSIPAGLLPMRLVPFLLLTLLGTTLWNGVLLAAGYATGSNW ARVEAYLGTYGTVVTLLLLVAVAGLLLYRLRNLVLRHRRAG
Sequences:
>Translated_201_residues MPELIVDAVELLGWLGIFAVMIVLAPEAVMPFLGYAVYQAELNPVTVLAAASLGATLGSTLIYLVVRAVGDARARRWVRR GSRWYLIQERDLEVTHRVFRRHGAWIVLFGRFVPTVRSLVSIPAGLLPMRLVPFLLLTLLGTTLWNGVLLAAGYATGSNW ARVEAYLGTYGTVVTLLLLVAVAGLLLYRLRNLVLRHRRAG >Mature_200_residues PELIVDAVELLGWLGIFAVMIVLAPEAVMPFLGYAVYQAELNPVTVLAAASLGATLGSTLIYLVVRAVGDARARRWVRRG SRWYLIQERDLEVTHRVFRRHGAWIVLFGRFVPTVRSLVSIPAGLLPMRLVPFLLLTLLGTTLWNGVLLAAGYATGSNWA RVEAYLGTYGTVVTLLLLVAVAGLLLYRLRNLVLRHRRAG
Specific function: Unknown
COG id: COG0586
COG function: function code S; Uncharacterized membrane-associated protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dedA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015414 [H]
Pfam domain/function: PF09335 SNARE_assoc [H]
EC number: 3.1.3.1
Molecular weight: Translated: 22190; Mature: 22059
Theoretical pI: Translated: 11.38; Mature: 11.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPELIVDAVELLGWLGIFAVMIVLAPEAVMPFLGYAVYQAELNPVTVLAAASLGATLGST CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LIYLVVRAVGDARARRWVRRGSRWYLIQERDLEVTHRVFRRHGAWIVLFGRFVPTVRSLV HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHH SIPAGLLPMRLVPFLLLTLLGTTLWNGVLLAAGYATGSNWARVEAYLGTYGTVVTLLLLV HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH AVAGLLLYRLRNLVLRHRRAG HHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PELIVDAVELLGWLGIFAVMIVLAPEAVMPFLGYAVYQAELNPVTVLAAASLGATLGST CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LIYLVVRAVGDARARRWVRRGSRWYLIQERDLEVTHRVFRRHGAWIVLFGRFVPTVRSLV HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHH SIPAGLLPMRLVPFLLLTLLGTTLWNGVLLAAGYATGSNWARVEAYLGTYGTVVTLLLLV HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH AVAGLLLYRLRNLVLRHRRAG HHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: phosphate monoester; H2O
Specific reaction: A phosphate monoester + H2O = an alcohol + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11337471 [H]