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The map label for this gene is dcd

Identifier: 121997510

GI number: 121997510

Start: 796388

End: 796957

Strand: Reverse

Name: dcd

Synonym: Hhal_0713

Alternate gene names: 121997510

Gene position: 796957-796388 (Counterclockwise)

Preceding gene: 121997511

Following gene: 121997506

Centisome position: 29.75

GC content: 64.04

Gene sequence:

>570_bases
ATGACCATCAAATCCGACCGGTGGATCCGGCACATGGCGCAAGAGCACGGGATGATCGAACCCTTCGAGCCGGGGCAGGT
GCGCGATACCCCCGAGGGGCAACGGGTCATCTCCTACGGCACCTCCAGCTACGGTTACGACGTCCGTTGCGGGAAGGACT
TCAAGATCTTCACCGATATCAACTCCGCGGTGGTGGATCCGAAGAACTTCGATGCGGCGAGCTTCGTCGATGTCCACGGC
GACGTCTGCATCATCCCGCCCAACTCCTTCGCCCTGGCCTACACCCTGGAGTACTTCCGCATCCCGCGGAACGTGCTGAC
CATCTGTCTGGGCAAGTCGACCTACGCCCGCTGCGGGATCATCGTCAACGTCACGCCGTTGGAGCCGGAGTGGGAGGGGC
GGGTGACCCTGGAGTTCTCCAACACCACCCCCCTGCCGGCGAAGATCCACGCCAACGAGGGCGTCGCGCAGATGCTCTTC
TTCGAGTCGGACGAGCCGTGCGAGGTCTCCTACGCCGACCGGGGTGGCAAGTACATGGGCCAGGACGGGGTGACGCTGCC
GCGCTCGTGA

Upstream 100 bases:

>100_bases
CGGCCCGGGTGCGCGTCCGCTGCGGCGGGCGCGTACCCTGGTCATCGGGCGCGCTGCCCCCTAGAATCCTGACCAGATCG
CAGTCACCAGAAGGCGCCGC

Downstream 100 bases:

>100_bases
CCCCGAGGCCTAGTCGTCCTGGATCGGCCCGCTGACCTCGGTCAGCTCCATGACGAAGGTGCGCCCGCTGTCGGCGTGCT
CGATCTTCACCGGCAGGTTG

Product: deoxycytidine triphosphate deaminase

Products: NA

Alternate protein names: dCTP deaminase

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MTIKSDRWIRHMAQEHGMIEPFEPGQVRDTPEGQRVISYGTSSYGYDVRCGKDFKIFTDINSAVVDPKNFDAASFVDVHG
DVCIIPPNSFALAYTLEYFRIPRNVLTICLGKSTYARCGIIVNVTPLEPEWEGRVTLEFSNTTPLPAKIHANEGVAQMLF
FESDEPCEVSYADRGGKYMGQDGVTLPRS

Sequences:

>Translated_189_residues
MTIKSDRWIRHMAQEHGMIEPFEPGQVRDTPEGQRVISYGTSSYGYDVRCGKDFKIFTDINSAVVDPKNFDAASFVDVHG
DVCIIPPNSFALAYTLEYFRIPRNVLTICLGKSTYARCGIIVNVTPLEPEWEGRVTLEFSNTTPLPAKIHANEGVAQMLF
FESDEPCEVSYADRGGKYMGQDGVTLPRS
>Mature_188_residues
TIKSDRWIRHMAQEHGMIEPFEPGQVRDTPEGQRVISYGTSSYGYDVRCGKDFKIFTDINSAVVDPKNFDAASFVDVHGD
VCIIPPNSFALAYTLEYFRIPRNVLTICLGKSTYARCGIIVNVTPLEPEWEGRVTLEFSNTTPLPAKIHANEGVAQMLFF
ESDEPCEVSYADRGGKYMGQDGVTLPRS

Specific function: De novo synthesis of thymidylate. [C]

COG id: COG0717

COG function: function code F; Deoxycytidine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dCTP deaminase family

Homologues:

Organism=Escherichia coli, GI1788379, Length=156, Percent_Identity=30.1282051282051, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DCD_HALHL (A1WUY3)

Other databases:

- EMBL:   CP000544
- RefSeq:   YP_001002297.1
- ProteinModelPortal:   A1WUY3
- SMR:   A1WUY3
- STRING:   A1WUY3
- GeneID:   4710950
- GenomeReviews:   CP000544_GR
- KEGG:   hha:Hhal_0713
- eggNOG:   COG0717
- HOGENOM:   HBG553199
- OMA:   MEYFRIP
- PhylomeDB:   A1WUY3
- ProtClustDB:   PRK00416
- BioCyc:   HHAL349124:HHAL_0713-MONOMER
- HAMAP:   MF_00146
- InterPro:   IPR011962
- InterPro:   IPR008180
- TIGRFAMs:   TIGR02274

Pfam domain/function: PF00692 dUTPase

EC number: =3.5.4.13

Molecular weight: Translated: 21137; Mature: 21006

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIKSDRWIRHMAQEHGMIEPFEPGQVRDTPEGQRVISYGTSSYGYDVRCGKDFKIFTDI
CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCEEEEEEC
NSAVVDPKNFDAASFVDVHGDVCIIPPNSFALAYTLEYFRIPRNVLTICLGKSTYARCGI
CCEEECCCCCCCEEEEECCCCEEEECCCCEEEEEEEEHHHCCCHHEEEEECCCCCCEEEE
IVNVTPLEPEWEGRVTLEFSNTTPLPAKIHANEGVAQMLFFESDEPCEVSYADRGGKYMG
EEEEECCCCCCCCEEEEEECCCCCCCEEEECCCCEEEEEEECCCCCCEEEECCCCCEEEC
QDGVTLPRS
CCCEECCCC
>Mature Secondary Structure 
TIKSDRWIRHMAQEHGMIEPFEPGQVRDTPEGQRVISYGTSSYGYDVRCGKDFKIFTDI
CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCEEEEEEC
NSAVVDPKNFDAASFVDVHGDVCIIPPNSFALAYTLEYFRIPRNVLTICLGKSTYARCGI
CCEEECCCCCCCEEEEECCCCEEEECCCCEEEEEEEEHHHCCCHHEEEEECCCCCCEEEE
IVNVTPLEPEWEGRVTLEFSNTTPLPAKIHANEGVAQMLFFESDEPCEVSYADRGGKYMG
EEEEECCCCCCCCEEEEEECCCCCCCEEEECCCCEEEEEEECCCCCCEEEECCCCCEEEC
QDGVTLPRS
CCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA