| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is 121997511
Identifier: 121997511
GI number: 121997511
Start: 797068
End: 798417
Strand: Reverse
Name: 121997511
Synonym: Hhal_0714
Alternate gene names: NA
Gene position: 798417-797068 (Counterclockwise)
Preceding gene: 121997513
Following gene: 121997510
Centisome position: 29.81
GC content: 67.48
Gene sequence:
>1350_bases ATGGCTTACGAAGAGCTGCTCGAAGAGATCCGACAGCTCCTCGATGGGAGGCGCTGGAAGGACGTCCGCGCTCGCATCGA GGAGCTGCCGGAGCAGGACATTGCGGAACTGATCCTGAGCCTGGAGAAATCCCGGCGCATCTTCCTGTTTAAGCTGCTGC CACGGCCCCGGGCCTCGGAGGTGTTCTCCTACCTCTCCGGGGACAACCAGGATGCCCTGCTCCAGGACATGACCGACCAT GAGACGCGGGAGATCGTCGCCGCGCTCACCCCGGACGACCGCACCGCCCTGTTCCAGGAGCTGCCCGCCGAGGCCACCCA GCGGCTGCTGGAGCTGCTGCCCCCGGGGGCACAGCGCGAGGCCCGCGAGCTGCTCGGCTACCCGGCGGAGAGCGTTGGCC GGCTGATGACGCCGGACTACATCGCCGTGCGCGCCGACTGGACCGTGGAGCGCAGCCTGCAGCACATCCGCGGCCAGCGC GAGAAGGCCGAGACGGTGAACGTCATCTACGTCACCGACCGCGAGGGCCGGTTGCTCGACGCCCTGACCATCCGCCGGTT CATCGTCGCCGCGCCGGAGACCGTGGTCGAGGAGCTGATGGACTACCACTTCATCAGCGTCTCGGCCTTCGAGGATCGCG AGAAGGCGGTGGAGACGGTGCAGCGCTACGACCTGACGGCGCTGCCGGTGGTCGATACCGAGGGGGTGCTGCTCGGCACC GTGACCCCGGACGACGTCATGGACGTGGCCGAGGCCGAGGCCACCGAGGACTTCCAGAAGGTCGGTGGTGTCGGCGTGCT CAACTTCAGTATGCGCGACGCCAGCATGAACCTGCTCTACCAGCGCCGTGTCGGCTGGCTGGTGCTGCTGGTGTTCATCA ACATGTTCGGCGGCGAGATCATCGCCGCCTACGAGGAGACCATCGAGGCGGTCATCGTCCTGGTCACCTTCCTGCCCCTG GTGGTGGATACTGGCGGTAACGCCGGCACCCAGTCGGCGACCCTGATGGTGCGCGCGCTCGCCACCGGTGACGTCAAGGC CAAGGACTGGTTGCGCCTGTGGGGCAAGGAGGCCGGTGTGGCCATCGCCCTGGGTGTCACCGTGGGTGTCGCCGTCTGGG CGCTGGGGCTCTACCGCGGCGGTCTGGACATCGCCTGGGTGGTCTCCCTGGCCATGGTGGCCGTGGTCTTCATGGGCAGC ATGATCGGGATGCTCCTGCCCTTCGGTCTGGCCCGGCTGAACCTCGACCCGGCCACGGCCAGCGCGCCGCTGATCACGTC CATCGCCGATATCGGCGGCATCCTGATCTACTTTGCCATCGCCACCGCGATGCTCGGGCACATGCTCTAG
Upstream 100 bases:
>100_bases GGCTCGCGAGATCTAGGGCCTCCCCCCTGATTCATCCACCCGGCGCGCCGGCACGCGCTGCCGCGTGCCCTCTGCACGCG CAACAGGAAGGAGCCCCATC
Downstream 100 bases:
>100_bases CGCCCTGTGCCGGCCCGGGTGCGCGTCCGCTGCGGCGGGCGCGTACCCTGGTCATCGGGCGCGCTGCCCCCTAGAATCCT GACCAGATCGCAGTCACCAG
Product: magnesium transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 449; Mature: 448
Protein sequence:
>449_residues MAYEELLEEIRQLLDGRRWKDVRARIEELPEQDIAELILSLEKSRRIFLFKLLPRPRASEVFSYLSGDNQDALLQDMTDH ETREIVAALTPDDRTALFQELPAEATQRLLELLPPGAQREARELLGYPAESVGRLMTPDYIAVRADWTVERSLQHIRGQR EKAETVNVIYVTDREGRLLDALTIRRFIVAAPETVVEELMDYHFISVSAFEDREKAVETVQRYDLTALPVVDTEGVLLGT VTPDDVMDVAEAEATEDFQKVGGVGVLNFSMRDASMNLLYQRRVGWLVLLVFINMFGGEIIAAYEETIEAVIVLVTFLPL VVDTGGNAGTQSATLMVRALATGDVKAKDWLRLWGKEAGVAIALGVTVGVAVWALGLYRGGLDIAWVVSLAMVAVVFMGS MIGMLLPFGLARLNLDPATASAPLITSIADIGGILIYFAIATAMLGHML
Sequences:
>Translated_449_residues MAYEELLEEIRQLLDGRRWKDVRARIEELPEQDIAELILSLEKSRRIFLFKLLPRPRASEVFSYLSGDNQDALLQDMTDH ETREIVAALTPDDRTALFQELPAEATQRLLELLPPGAQREARELLGYPAESVGRLMTPDYIAVRADWTVERSLQHIRGQR EKAETVNVIYVTDREGRLLDALTIRRFIVAAPETVVEELMDYHFISVSAFEDREKAVETVQRYDLTALPVVDTEGVLLGT VTPDDVMDVAEAEATEDFQKVGGVGVLNFSMRDASMNLLYQRRVGWLVLLVFINMFGGEIIAAYEETIEAVIVLVTFLPL VVDTGGNAGTQSATLMVRALATGDVKAKDWLRLWGKEAGVAIALGVTVGVAVWALGLYRGGLDIAWVVSLAMVAVVFMGS MIGMLLPFGLARLNLDPATASAPLITSIADIGGILIYFAIATAMLGHML >Mature_448_residues AYEELLEEIRQLLDGRRWKDVRARIEELPEQDIAELILSLEKSRRIFLFKLLPRPRASEVFSYLSGDNQDALLQDMTDHE TREIVAALTPDDRTALFQELPAEATQRLLELLPPGAQREARELLGYPAESVGRLMTPDYIAVRADWTVERSLQHIRGQRE KAETVNVIYVTDREGRLLDALTIRRFIVAAPETVVEELMDYHFISVSAFEDREKAVETVQRYDLTALPVVDTEGVLLGTV TPDDVMDVAEAEATEDFQKVGGVGVLNFSMRDASMNLLYQRRVGWLVLLVFINMFGGEIIAAYEETIEAVIVLVTFLPLV VDTGGNAGTQSATLMVRALATGDVKAKDWLRLWGKEAGVAIALGVTVGVAVWALGLYRGGLDIAWVVSLAMVAVVFMGSM IGMLLPFGLARLNLDPATASAPLITSIADIGGILIYFAIATAMLGHML
Specific function: Acts as a magnesium transporter [H]
COG id: COG2239
COG function: function code P; Mg/Co/Ni transporter MgtE (contains CBS domain)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR006668 - InterPro: IPR006667 - InterPro: IPR006669 [H]
Pfam domain/function: PF00571 CBS; PF01769 MgtE; PF03448 MgtE_N [H]
EC number: NA
Molecular weight: Translated: 49607; Mature: 49476
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYEELLEEIRQLLDGRRWKDVRARIEELPEQDIAELILSLEKSRRIFLFKLLPRPRASE CCHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHH VFSYLSGDNQDALLQDMTDHETREIVAALTPDDRTALFQELPAEATQRLLELLPPGAQRE HHHHHCCCCCHHHHHHHCCHHHHHHHEEECCCHHHHHHHHCCHHHHHHHHHHCCCCCHHH ARELLGYPAESVGRLMTPDYIAVRADWTVERSLQHIRGQREKAETVNVIYVTDREGRLLD HHHHHCCCHHHHCCCCCCCEEEEEECCHHHHHHHHHHCCHHHCCEEEEEEEECCCCCHHH ALTIRRFIVAAPETVVEELMDYHFISVSAFEDREKAVETVQRYDLTALPVVDTEGVLLGT HHHHHHHHHHCCHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHCCCCEECEECCCCEEEEC VTPDDVMDVAEAEATEDFQKVGGVGVLNFSMRDASMNLLYQRRVGWLVLLVFINMFGGEI CCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCHH IAAYEETIEAVIVLVTFLPLVVDTGGNAGTQSATLMVRALATGDVKAKDWLRLWGKEAGV HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCE AIALGVTVGVAVWALGLYRGGLDIAWVVSLAMVAVVFMGSMIGMLLPFGLARLNLDPATA EEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC SAPLITSIADIGGILIYFAIATAMLGHML CCHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AYEELLEEIRQLLDGRRWKDVRARIEELPEQDIAELILSLEKSRRIFLFKLLPRPRASE CHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHH VFSYLSGDNQDALLQDMTDHETREIVAALTPDDRTALFQELPAEATQRLLELLPPGAQRE HHHHHCCCCCHHHHHHHCCHHHHHHHEEECCCHHHHHHHHCCHHHHHHHHHHCCCCCHHH ARELLGYPAESVGRLMTPDYIAVRADWTVERSLQHIRGQREKAETVNVIYVTDREGRLLD HHHHHCCCHHHHCCCCCCCEEEEEECCHHHHHHHHHHCCHHHCCEEEEEEEECCCCCHHH ALTIRRFIVAAPETVVEELMDYHFISVSAFEDREKAVETVQRYDLTALPVVDTEGVLLGT HHHHHHHHHHCCHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHCCCCEECEECCCCEEEEC VTPDDVMDVAEAEATEDFQKVGGVGVLNFSMRDASMNLLYQRRVGWLVLLVFINMFGGEI CCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCHH IAAYEETIEAVIVLVTFLPLVVDTGGNAGTQSATLMVRALATGDVKAKDWLRLWGKEAGV HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCE AIALGVTVGVAVWALGLYRGGLDIAWVVSLAMVAVVFMGSMIGMLLPFGLARLNLDPATA EEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC SAPLITSIADIGGILIYFAIATAMLGHML CCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA