| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is 121997495
Identifier: 121997495
GI number: 121997495
Start: 780740
End: 781606
Strand: Reverse
Name: 121997495
Synonym: Hhal_0698
Alternate gene names: NA
Gene position: 781606-780740 (Counterclockwise)
Preceding gene: 121997496
Following gene: 121997494
Centisome position: 29.18
GC content: 64.48
Gene sequence:
>867_bases ATGAGGCGGGTGGTTAGGTGTCACTGGGGAGCTGTTGGTTGCGTGGCAACGACTTTGGTATTTGCCGCGACGCAGGCGTC GGCGGCGATTCAGATCGCGCCGCAGCGGCTGTTCTTCGACGATCAGCAGCGCAGCGCGCAGGTCGAGGTGTTTAACCAGA GCGATGAGGTCCAAGAGTACCGGGTTCTGGTGACCGATGTCGAGGCGGATGCCTACGGGCGTTCGGAGCTGATTGATCCC GTGGAGCCTGAAGCCGGGGAGCGGGGCCACCACGGGGCCGACCTGCTGCGCCACCATCCCCGCCAGATGACCCTCCAGCC GGGCGAGAGCCAGACCGTGCGCATCATGTCCCGTGTGCCGGATGAGATCGATCCGGGCGAGTATCGCGCCCGTTTTGCCG TTCGGACCATGCCAACCGCCGACGGACAGGCATTCGCCGAGGAGGAACTCGAGGACGACGAGGTGGCCGTCGATATTCAG GCGCTCTTCGCCATGACGATTCCGGTCGGTATCCTAGTCGGTGATCCGGACGGCGAGCCGGAGATTCGGGGTGCTCGCTT CGAACCAGCGGAAGACGCGGACGGCGAGGACTCAGTGGAGATCACGGTGGCCCGCAACGGTGAGCGGGGGGTTTACGGTT CCCTGGAGGTCTACCGGCCCGGAGAGGATGAGCCGATCCACGAACGCTCTCGGGCGGCTGTCTCCACATCGATGGATGAG CGGATTCTGCCCTTCTCGGTTGAGAATCACGATGTGGCCCCGGGCGATGAGTTGCGGGTGGTGTATCGGGCCTTCGAGGA TGACGAGGAGGGCTTTGGCGAGAGCGGTGGTCACGTGAAGGCGGAGCGCACCGTCACCCTCGAGTAA
Upstream 100 bases:
>100_bases CCCAGGGAGGAGGCGGGGAAACCTCGGTTTTAGATTGGAAGCGGATGGGGGGGTGCCCCAAGGGTCATTAGGGCAATGAT AGCGGATAGGAGCGAAATCC
Downstream 100 bases:
>100_bases GTCGGTGAGATGGTCTCGCGTGGGTGCGACTGGGCGGTCTGTTGCGGTCGCGGTTTGGCTCCTGGCCGCGGCGGGGGCGT TCTGGTCGCCCAGCGCGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MRRVVRCHWGAVGCVATTLVFAATQASAAIQIAPQRLFFDDQQRSAQVEVFNQSDEVQEYRVLVTDVEADAYGRSELIDP VEPEAGERGHHGADLLRHHPRQMTLQPGESQTVRIMSRVPDEIDPGEYRARFAVRTMPTADGQAFAEEELEDDEVAVDIQ ALFAMTIPVGILVGDPDGEPEIRGARFEPAEDADGEDSVEITVARNGERGVYGSLEVYRPGEDEPIHERSRAAVSTSMDE RILPFSVENHDVAPGDELRVVYRAFEDDEEGFGESGGHVKAERTVTLE
Sequences:
>Translated_288_residues MRRVVRCHWGAVGCVATTLVFAATQASAAIQIAPQRLFFDDQQRSAQVEVFNQSDEVQEYRVLVTDVEADAYGRSELIDP VEPEAGERGHHGADLLRHHPRQMTLQPGESQTVRIMSRVPDEIDPGEYRARFAVRTMPTADGQAFAEEELEDDEVAVDIQ ALFAMTIPVGILVGDPDGEPEIRGARFEPAEDADGEDSVEITVARNGERGVYGSLEVYRPGEDEPIHERSRAAVSTSMDE RILPFSVENHDVAPGDELRVVYRAFEDDEEGFGESGGHVKAERTVTLE >Mature_288_residues MRRVVRCHWGAVGCVATTLVFAATQASAAIQIAPQRLFFDDQQRSAQVEVFNQSDEVQEYRVLVTDVEADAYGRSELIDP VEPEAGERGHHGADLLRHHPRQMTLQPGESQTVRIMSRVPDEIDPGEYRARFAVRTMPTADGQAFAEEELEDDEVAVDIQ ALFAMTIPVGILVGDPDGEPEIRGARFEPAEDADGEDSVEITVARNGERGVYGSLEVYRPGEDEPIHERSRAAVSTSMDE RILPFSVENHDVAPGDELRVVYRAFEDDEEGFGESGGHVKAERTVTLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31861; Mature: 31861
Theoretical pI: Translated: 4.17; Mature: 4.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRVVRCHWGAVGCVATTLVFAATQASAAIQIAPQRLFFDDQQRSAQVEVFNQSDEVQEY CCCEEEECCCHHHHHHHHHHHHHHCCCEEEEECCHHHEECCCCCCCEEEEECCCCCCEEE RVLVTDVEADAYGRSELIDPVEPEAGERGHHGADLLRHHPRQMTLQPGESQTVRIMSRVP EEEEEECCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHCCCCCEEECCCCCHHHHHHHHCC DEIDPGEYRARFAVRTMPTADGQAFAEEELEDDEVAVDIQALFAMTIPVGILVGDPDGEP CCCCCCCCEEEEEEEECCCCCCCHHHHHCCCCCCEEEHHHHHHHHHCCEEEEEECCCCCC EIRGARFEPAEDADGEDSVEITVARNGERGVYGSLEVYRPGEDEPIHERSRAAVSTSMDE CCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCC RILPFSVENHDVAPGDELRVVYRAFEDDEEGFGESGGHVKAERTVTLE CCCEEECCCCCCCCCHHHEEEEEECCCCHHCCCCCCCEEEEEEEEEEC >Mature Secondary Structure MRRVVRCHWGAVGCVATTLVFAATQASAAIQIAPQRLFFDDQQRSAQVEVFNQSDEVQEY CCCEEEECCCHHHHHHHHHHHHHHCCCEEEEECCHHHEECCCCCCCEEEEECCCCCCEEE RVLVTDVEADAYGRSELIDPVEPEAGERGHHGADLLRHHPRQMTLQPGESQTVRIMSRVP EEEEEECCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHCCCCCEEECCCCCHHHHHHHHCC DEIDPGEYRARFAVRTMPTADGQAFAEEELEDDEVAVDIQALFAMTIPVGILVGDPDGEP CCCCCCCCEEEEEEEECCCCCCCHHHHHCCCCCCEEEHHHHHHHHHCCEEEEEECCCCCC EIRGARFEPAEDADGEDSVEITVARNGERGVYGSLEVYRPGEDEPIHERSRAAVSTSMDE CCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCC RILPFSVENHDVAPGDELRVVYRAFEDDEEGFGESGGHVKAERTVTLE CCCEEECCCCCCCCCHHHEEEEEECCCCHHCCCCCCCEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA