Definition Halorhodospira halophila SL1 chromosome, complete genome.
Accession NC_008789
Length 2,678,452

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The map label for this gene is 121997482

Identifier: 121997482

GI number: 121997482

Start: 769281

End: 769640

Strand: Reverse

Name: 121997482

Synonym: Hhal_0685

Alternate gene names: NA

Gene position: 769640-769281 (Counterclockwise)

Preceding gene: 121997483

Following gene: 121997477

Centisome position: 28.73

GC content: 56.11

Gene sequence:

>360_bases
ATGTCTGAACCCGGTGCAAGGCAATGGTCATTTTACTTGGATGACATGATCCGGTTTGCCAATAAGGTGCAGGCTTACAC
GGATGGCCTAGATTTCGCTAGTTTCGTGGCGAACGAACTGGTCTATGATGCCACCCTCCGTAACCTGGAGCTGATCGGCG
AGGCGGCCACGCATATCCCGGAGCAGGTTCGGTCTTCATCGCCAAAGATCCCTTGGCGCATGATCATTGCGACGCGGAAC
AGGCTGATCCACGGTTACCTTGGCATTGACCAGGAAACGGTCTGGAGCATTGTCCGGGAGGAGATCCCCGAGTTGCTGAG
GGAGCTTGAGGCCTTGAGAGAGCAGTGCCGCACCCTGTGA

Upstream 100 bases:

>100_bases
CAATTCTACCTCGAGGATTTGCTGGGATGCCCGGTGGACTTGGTGACTGAGCAGGCTTTGCGCCGGGAGCTGCGCCCTTA
CATCGAGCAGGAGCGCATCA

Downstream 100 bases:

>100_bases
TGGCAGGGCACGGCACGGCGATCCGCAATTGATTACTTAGAGCGCCTCCACCCGCCGCTCTTGTTCGGCGACCTTCTCCA
GGGCCTGCTGCGCCTCGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 118

Protein sequence:

>119_residues
MSEPGARQWSFYLDDMIRFANKVQAYTDGLDFASFVANELVYDATLRNLELIGEAATHIPEQVRSSSPKIPWRMIIATRN
RLIHGYLGIDQETVWSIVREEIPELLRELEALREQCRTL

Sequences:

>Translated_119_residues
MSEPGARQWSFYLDDMIRFANKVQAYTDGLDFASFVANELVYDATLRNLELIGEAATHIPEQVRSSSPKIPWRMIIATRN
RLIHGYLGIDQETVWSIVREEIPELLRELEALREQCRTL
>Mature_118_residues
SEPGARQWSFYLDDMIRFANKVQAYTDGLDFASFVANELVYDATLRNLELIGEAATHIPEQVRSSSPKIPWRMIIATRNR
LIHGYLGIDQETVWSIVREEIPELLRELEALREQCRTL

Specific function: Unknown

COG id: COG2361

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0331 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008201 [H]

Pfam domain/function: PF01934 DUF86 [H]

EC number: NA

Molecular weight: Translated: 13796; Mature: 13665

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEPGARQWSFYLDDMIRFANKVQAYTDGLDFASFVANELVYDATLRNLELIGEAATHIP
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQVRSSSPKIPWRMIIATRNRLIHGYLGIDQETVWSIVREEIPELLRELEALREQCRTL
HHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SEPGARQWSFYLDDMIRFANKVQAYTDGLDFASFVANELVYDATLRNLELIGEAATHIP
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQVRSSSPKIPWRMIIATRNRLIHGYLGIDQETVWSIVREEIPELLRELEALREQCRTL
HHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11932238 [H]