| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is hisZ [H]
Identifier: 121997458
GI number: 121997458
Start: 743999
End: 745177
Strand: Reverse
Name: hisZ [H]
Synonym: Hhal_0661
Alternate gene names: 121997458
Gene position: 745177-743999 (Counterclockwise)
Preceding gene: 121997459
Following gene: 121997457
Centisome position: 27.82
GC content: 72.18
Gene sequence:
>1179_bases ATGGATCGCAAGGCACGGTGGATGCTGCCCGACGGCGTCGACGAGTTGTTGCCGCCGGAGGCTGCACAGGCCGAGGCGTT GCGCCGTCGGCTGCTGGATCTGTTCGATTCCTGGGGGTATGAGCTGATCATGCCCCCTTTCATTGAGTATCTGGAGGCTC TGCTGACCGGCACCGGCCGGGATCTGGATGTGCAGACCTTCAAGGTCACCGATCAGCTCTCCGGGCGGACCCTGGGGGTG CGCCCGGACATCACCCCGCAGGCGGCGCGCGTCGACGCCCATCAGCTGCGTCGCAAGGGCATTACCCGGTTGTGTTACAT CGGCAGCACGCTGCAGGCCCGGGCCGAGGGGCCGGCCGGCAGCCGCAACGCCGTGCAGCTGGGCGCGGAACTCTACGGCC ACGCCGGGGTGGAGAGTGATCTCGAGGTCATCTCGCTGATGCTCGCCACCCTGCGTGCCGCCGGGGTGGAGCGGCTGCAC CTGGATGTGGGCCACGTGGGGATCTTCGAGGCGCTGCTCGAGGACCTCGGCCTGGGGCCCGCAGCGGAAGAGGCGCTACT CGACGCCCTGCAGCGCAAGGCGGGTGATGAGATCGCCGCGGTGCTGGCCGAGGCCGGCGTGGAGACCGCGCAGGCCGAGC GGCTCTCGGCGTTGGCCGGACTGCACGGCGGGGTGGAGATCCTCGACCGGGCGCAGACCGTCCTCGGCTGGGCCGGGCCA GCGGTGGCCGAGGCGCTGGAGCAGCTTCGGACGGTGGCCGACAGCCTGGCCCGTCGCGAGCCGGAGCTGCCGCTGCACCT GGATCTGGGCGAGCTGCGCGGCTACCGCTACCACACCGGCCTGGTGTTCGCGGCCTACACCCCGGGCTACGGGCAGGAGC TGGCCCGCGGCGGGCGCTACGACGGCATCGGCCAGGCGTTCGGGCGCCCGCGGCCGGCCACCGGCTATAGCGCTGACCTC AAGGCGCTGCTGACCCTTGGGCACGGCGTCGAGGGCCCGGCGGCCGGCGGGGTGCTGGCCCCGTGGCGTGACGACCCGGC GCTGCATGCGCGCGTGGCCGAGCTGCGCCGCGCCGGCGAGCGGGTGGTCTGGCAGCTGCCGGGGGATGAGCAGGACAACC ACGGTTGCGATCGGCGCCTGGTCGAGCGCAACGGCACCTGGGAACTGGATACGGAGTGA
Upstream 100 bases:
>100_bases TTTTCCTGCAGGCCGCCGAGATGGATGATCGAAGCCTGCGGACCGTCGGTCTCCTGTCCATGGGGATCGGCGTTCTGCTG CTCTATTGGGTGCGAGGTTA
Downstream 100 bases:
>100_bases GTATGGGCACCAATGTGGTCGTAGTCGGTACGCAGTGGGGCGACGAAGGCAAGGGCAAGATCGTCGACTGGCTGACCGAG AACGCCGGGGTGGTGGCGCG
Product: ATP phosphoribosyltransferase regulatory subunit
Products: AMP; diphosphate +L-histidyl-tRNAHis [C]
Alternate protein names: NA
Number of amino acids: Translated: 392; Mature: 392
Protein sequence:
>392_residues MDRKARWMLPDGVDELLPPEAAQAEALRRRLLDLFDSWGYELIMPPFIEYLEALLTGTGRDLDVQTFKVTDQLSGRTLGV RPDITPQAARVDAHQLRRKGITRLCYIGSTLQARAEGPAGSRNAVQLGAELYGHAGVESDLEVISLMLATLRAAGVERLH LDVGHVGIFEALLEDLGLGPAAEEALLDALQRKAGDEIAAVLAEAGVETAQAERLSALAGLHGGVEILDRAQTVLGWAGP AVAEALEQLRTVADSLARREPELPLHLDLGELRGYRYHTGLVFAAYTPGYGQELARGGRYDGIGQAFGRPRPATGYSADL KALLTLGHGVEGPAAGGVLAPWRDDPALHARVAELRRAGERVVWQLPGDEQDNHGCDRRLVERNGTWELDTE
Sequences:
>Translated_392_residues MDRKARWMLPDGVDELLPPEAAQAEALRRRLLDLFDSWGYELIMPPFIEYLEALLTGTGRDLDVQTFKVTDQLSGRTLGV RPDITPQAARVDAHQLRRKGITRLCYIGSTLQARAEGPAGSRNAVQLGAELYGHAGVESDLEVISLMLATLRAAGVERLH LDVGHVGIFEALLEDLGLGPAAEEALLDALQRKAGDEIAAVLAEAGVETAQAERLSALAGLHGGVEILDRAQTVLGWAGP AVAEALEQLRTVADSLARREPELPLHLDLGELRGYRYHTGLVFAAYTPGYGQELARGGRYDGIGQAFGRPRPATGYSADL KALLTLGHGVEGPAAGGVLAPWRDDPALHARVAELRRAGERVVWQLPGDEQDNHGCDRRLVERNGTWELDTE >Mature_392_residues MDRKARWMLPDGVDELLPPEAAQAEALRRRLLDLFDSWGYELIMPPFIEYLEALLTGTGRDLDVQTFKVTDQLSGRTLGV RPDITPQAARVDAHQLRRKGITRLCYIGSTLQARAEGPAGSRNAVQLGAELYGHAGVESDLEVISLMLATLRAAGVERLH LDVGHVGIFEALLEDLGLGPAAEEALLDALQRKAGDEIAAVLAEAGVETAQAERLSALAGLHGGVEILDRAQTVLGWAGP AVAEALEQLRTVADSLARREPELPLHLDLGELRGYRYHTGLVFAAYTPGYGQELARGGRYDGIGQAFGRPRPATGYSADL KALLTLGHGVEGPAAGGVLAPWRDDPALHARVAELRRAGERVVWQLPGDEQDNHGCDRRLVERNGTWELDTE
Specific function: Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine [H]
COG id: COG3705
COG function: function code E; ATP phosphoribosyltransferase involved in histidine biosynthesis
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family. HisZ subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004517 - InterPro: IPR004516 [H]
Pfam domain/function: NA
EC number: 6.1.1.21 [C]
Molecular weight: Translated: 42391; Mature: 42391
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: PS00422 GRANINS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRKARWMLPDGVDELLPPEAAQAEALRRRLLDLFDSWGYELIMPPFIEYLEALLTGTGR CCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHCCCCC DLDVQTFKVTDQLSGRTLGVRPDITPQAARVDAHQLRRKGITRLCYIGSTLQARAEGPAG CCCEEEEEECCCCCCCEECCCCCCCCHHHHCCHHHHHHHCCCEEEHHCCHHHHHCCCCCC SRNAVQLGAELYGHAGVESDLEVISLMLATLRAAGVERLHLDVGHVGIFEALLEDLGLGP CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCC AAEEALLDALQRKAGDEIAAVLAEAGVETAQAERLSALAGLHGGVEILDRAQTVLGWAGP CHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCH AVAEALEQLRTVADSLARREPELPLHLDLGELRGYRYHTGLVFAAYTPGYGQELARGGRY HHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHCCEEEECCEEEEEECCCHHHHHHCCCCC DGIGQAFGRPRPATGYSADLKALLTLGHGVEGPAAGGVLAPWRDDPALHARVAELRRAGE CCCHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC RVVWQLPGDEQDNHGCDRRLVERNGTWELDTE CEEEECCCCCCCCCCHHHHHHHCCCCEECCCC >Mature Secondary Structure MDRKARWMLPDGVDELLPPEAAQAEALRRRLLDLFDSWGYELIMPPFIEYLEALLTGTGR CCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHCCCCC DLDVQTFKVTDQLSGRTLGVRPDITPQAARVDAHQLRRKGITRLCYIGSTLQARAEGPAG CCCEEEEEECCCCCCCEECCCCCCCCHHHHCCHHHHHHHCCCEEEHHCCHHHHHCCCCCC SRNAVQLGAELYGHAGVESDLEVISLMLATLRAAGVERLHLDVGHVGIFEALLEDLGLGP CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCC AAEEALLDALQRKAGDEIAAVLAEAGVETAQAERLSALAGLHGGVEILDRAQTVLGWAGP CHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCH AVAEALEQLRTVADSLARREPELPLHLDLGELRGYRYHTGLVFAAYTPGYGQELARGGRY HHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHCCEEEECCEEEEEECCCHHHHHHCCCCC DGIGQAFGRPRPATGYSADLKALLTLGHGVEGPAAGGVLAPWRDDPALHARVAELRRAGE CCCHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC RVVWQLPGDEQDNHGCDRRLVERNGTWELDTE CEEEECCCCCCCCCCHHHHHHHCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Mg2+ [C]
Kcat value (1/min): 8520 [C]
Specific activity: 121.8
Km value (mM): 0.06 {His}} 0.046 {His}} 0.03 {His}} 0.02 {His}} 0.017 {His}} 0.011 {His}} 0.008 {His}} 0.0014 {tRNAHis}} 0.00056 {tRNAHis}} 0.0016 {U73tRNAHisGUG}} 0.00031 {U73tRNAHisGUG}} 0.89 {ATP}} 0.74 {ATP}} 0.655 {ATP}} 0.5
Substrates: ATP; @HIST01.txt*L-histidine!; tRNAHis [C]
Specific reaction: ATP + @HIST01.txt*L-histidine! + tRNAHis = AMP + diphosphate +L-histidyl-tRNAHis [C]
General reaction: Aminoacylation; Esterification [C]
Inhibitor: 1, 2, 4-Triazole-3-alanine; D-Histidine; Diphosphate; L-Histidinol; Mg2+; N-Acetyl histidine; NEM; p-Chloromercuribenzoate [C]
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA