Definition Halorhodospira halophila SL1 chromosome, complete genome.
Accession NC_008789
Length 2,678,452

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The map label for this gene is 121997441

Identifier: 121997441

GI number: 121997441

Start: 719387

End: 720382

Strand: Reverse

Name: 121997441

Synonym: Hhal_0642

Alternate gene names: NA

Gene position: 720382-719387 (Counterclockwise)

Preceding gene: 121997442

Following gene: 121997440

Centisome position: 26.9

GC content: 63.45

Gene sequence:

>996_bases
ATGGCAAAACGCGGCCTGACCGAGAAGGTCCGTCAGGGTCTGTGGCAGGGGCACTACGGCAACCGGGAGCAGTCCCTGGA
CCGACCGGGTGACCCGGTCACGGTGACCCAGATGGTGCTTTCCATCGACCAGGTGGTTGAGTACGAGGACAACCCGCGCC
GCCTGGAGAATCCCCGTTACGAGGAGATTAAGCAGTCGATTGCTGCGCAGCGCGGGCTCAACAACAGCCTGGATGTGACC
CGCCGGCCAGGGGATGAGCATTACATCACCTGTGCCGGCGGCAATACCCGTTTACGCATTCTGCGTGAGCTCTACGCCGA
AACGGGGGATGAGGCTTTCGCGCGGATCTACTGCCTCTACCACCCCTGGCAGGGTGAGACCACCGTTCTAACCAGCCACC
TGGTCGAGAACGAGCTTCGAGGCGAGCTCGCGCTGATCGATAAGGCCCTTGCGCTGGAGCACCTCCGGAGGCATCTGGAA
TCCGAAGTGGGGGAGCGTCTCAGCCGGAATGCCTTCATTACCCGGCTCCATGCCCTTGGTTACACGATCAGTAAGCGTCA
ACTGCTCCGGTACGAGTTTGCGGCGCAACACCTGCTGGCCGCGATTCCAGAGGCGCTGAACAGTCTCGGGGCCAGAACGC
TCGACTACCTGAGGAGGATCCACGACGCGGCCTGCCAGGTCTGGCACCACTATCAGCGGGACGCTGAGGATTTCGACATC
CTCTGGGAGCAGGCTCTGGCCAATACGGATGCCGCCGAGTGGGACCCCGAGGAGGGTCGGGAGGAGCTTGCGGCCCGGAT
GGCGGAAGCGCTCGGCATCGACCGCCGTGCCGTGCGTTACGAAATGGACACAGTCCTGAGTGGCCACCCGCTCCCAAAAC
GCGCCGACCACATGGCGGATCAGCCCGCTTCAGTACTGGGAATGGAGGGCGCTACCCCGGAGGAGAGCACCTCGGCAGAC
GCTGGGGGGGGTAGAGAGATCGTCCCCCAAGGATAG

Upstream 100 bases:

>100_bases
TTCAGCGCTCGAGACCATGCGAGCTCTTACGCAAGAGCTGTTCCCGCATCTCGACTCGGCCTAACCAGCAAGAGCGCAGC
TCAGAGCGCCGGAGACGCAT

Downstream 100 bases:

>100_bases
CGCCGACGCGCACGCGCCATCCTGGGGCGAGGAGGGGGGCGGGAGCCTGGAAGAGTCCACTCCGTTTGAGCCCGAAGCGG
TGCTCAACCGGCCCAAGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 331; Mature: 330

Protein sequence:

>331_residues
MAKRGLTEKVRQGLWQGHYGNREQSLDRPGDPVTVTQMVLSIDQVVEYEDNPRRLENPRYEEIKQSIAAQRGLNNSLDVT
RRPGDEHYITCAGGNTRLRILRELYAETGDEAFARIYCLYHPWQGETTVLTSHLVENELRGELALIDKALALEHLRRHLE
SEVGERLSRNAFITRLHALGYTISKRQLLRYEFAAQHLLAAIPEALNSLGARTLDYLRRIHDAACQVWHHYQRDAEDFDI
LWEQALANTDAAEWDPEEGREELAARMAEALGIDRRAVRYEMDTVLSGHPLPKRADHMADQPASVLGMEGATPEESTSAD
AGGGREIVPQG

Sequences:

>Translated_331_residues
MAKRGLTEKVRQGLWQGHYGNREQSLDRPGDPVTVTQMVLSIDQVVEYEDNPRRLENPRYEEIKQSIAAQRGLNNSLDVT
RRPGDEHYITCAGGNTRLRILRELYAETGDEAFARIYCLYHPWQGETTVLTSHLVENELRGELALIDKALALEHLRRHLE
SEVGERLSRNAFITRLHALGYTISKRQLLRYEFAAQHLLAAIPEALNSLGARTLDYLRRIHDAACQVWHHYQRDAEDFDI
LWEQALANTDAAEWDPEEGREELAARMAEALGIDRRAVRYEMDTVLSGHPLPKRADHMADQPASVLGMEGATPEESTSAD
AGGGREIVPQG
>Mature_330_residues
AKRGLTEKVRQGLWQGHYGNREQSLDRPGDPVTVTQMVLSIDQVVEYEDNPRRLENPRYEEIKQSIAAQRGLNNSLDVTR
RPGDEHYITCAGGNTRLRILRELYAETGDEAFARIYCLYHPWQGETTVLTSHLVENELRGELALIDKALALEHLRRHLES
EVGERLSRNAFITRLHALGYTISKRQLLRYEFAAQHLLAAIPEALNSLGARTLDYLRRIHDAACQVWHHYQRDAEDFDIL
WEQALANTDAAEWDPEEGREELAARMAEALGIDRRAVRYEMDTVLSGHPLPKRADHMADQPASVLGMEGATPEESTSADA
GGGREIVPQG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37466; Mature: 37335

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKRGLTEKVRQGLWQGHYGNREQSLDRPGDPVTVTQMVLSIDQVVEYEDNPRRLENPRY
CCCCCHHHHHHHHHHCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCH
EEIKQSIAAQRGLNNSLDVTRRPGDEHYITCAGGNTRLRILRELYAETGDEAFARIYCLY
HHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCHHHHHEEEEEE
HPWQGETTVLTSHLVENELRGELALIDKALALEHLRRHLESEVGERLSRNAFITRLHALG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YTISKRQLLRYEFAAQHLLAAIPEALNSLGARTLDYLRRIHDAACQVWHHYQRDAEDFDI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
LWEQALANTDAAEWDPEEGREELAARMAEALGIDRRAVRYEMDTVLSGHPLPKRADHMAD
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHCC
QPASVLGMEGATPEESTSADAGGGREIVPQG
CCHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AKRGLTEKVRQGLWQGHYGNREQSLDRPGDPVTVTQMVLSIDQVVEYEDNPRRLENPRY
CCCCHHHHHHHHHHCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCH
EEIKQSIAAQRGLNNSLDVTRRPGDEHYITCAGGNTRLRILRELYAETGDEAFARIYCLY
HHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCHHHHHEEEEEE
HPWQGETTVLTSHLVENELRGELALIDKALALEHLRRHLESEVGERLSRNAFITRLHALG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YTISKRQLLRYEFAAQHLLAAIPEALNSLGARTLDYLRRIHDAACQVWHHYQRDAEDFDI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
LWEQALANTDAAEWDPEEGREELAARMAEALGIDRRAVRYEMDTVLSGHPLPKRADHMAD
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHCC
QPASVLGMEGATPEESTSADAGGGREIVPQG
CCHHHHCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA