| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is 121997442
Identifier: 121997442
GI number: 121997442
Start: 720419
End: 721240
Strand: Reverse
Name: 121997442
Synonym: Hhal_0643
Alternate gene names: NA
Gene position: 721240-720419 (Counterclockwise)
Preceding gene: 121997446
Following gene: 121997441
Centisome position: 26.93
GC content: 64.84
Gene sequence:
>822_bases ATGGCAATCAAACTCTGCGTCTGCTCCACCAAAGGGGGCGTCGGCAAGACGACCGTCACCGCCAATCTGGGCGCCTATCT GGCCGATCTGGGGCAGCGCGTGCTGCTCGTCGATGCAGACGTTCAACCAACACTTTCCAGCTATTTCCCCATTCACGACC CGCCATCCCCCAGGGGGCTAACGGCACTCATCACCGAAGGCGAGACCGGGAGCACCGTCAGCACCACCAAGATCGATGGC GACGAGGGCGGGCTGCTCGACCTGGTTCTCAGTGATGATCCGGACGGTGCCCTGCAGAATTGGATCCTGCACACCCCGGA CGGCCGGGTTCGGCTTCGGCACATCCTGAGCGAGTACGACGACATCTACGACGTCGTGCTGATCGACACGCAGGGTGCCG TCGGCCCACTGCAGGACGCTGCAGTCCTCTCGGCGGACATGCTCCTGTCCCCGATTCCACCCGAGATCCTTTCAGCGCGT GAGTTCGCCCGCGGCACGCTCGGCATGATCGATCGCCTCAAGCCCATGGCGGCACTTGGCGCACCGATTGCCCCGCTGCG GGGACTGCTCTACCGCATGGATCGTACGGCCGACGCCCGGGCCATTGCGCACGAGCTGCGTCGAGAGACTTACGAGCCGA GTAAGGGGCAGATCACGATCCTGGAAACCGCAGTGCCGGCGACCGTGGCCTACCGGGAGGCGGCGACCCGACAGATCCCG GCGCATCGCTGGGAGCCAAGGCGGGAAGGGCCGACCCCTTCAGCGCTCGAGACCATGCGAGCTCTTACGCAAGAGCTGTT CCCGCATCTCGACTCGGCCTAA
Upstream 100 bases:
>100_bases GGCATTGCGCACGAAGTACCGCGTTCTGCTCTGATCGTCTTAGCTCTTTTAGGCTGGTGATGCATTCCCTCCGTTTGGGT CCAAGCGGAGGGGAAGCACC
Downstream 100 bases:
>100_bases CCAGCAAGAGCGCAGCTCAGAGCGCCGGAGACGCATATGGCAAAACGCGGCCTGACCGAGAAGGTCCGTCAGGGTCTGTG GCAGGGGCACTACGGCAACC
Product: cobyrinic acid a,c-diamide synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 273; Mature: 272
Protein sequence:
>273_residues MAIKLCVCSTKGGVGKTTVTANLGAYLADLGQRVLLVDADVQPTLSSYFPIHDPPSPRGLTALITEGETGSTVSTTKIDG DEGGLLDLVLSDDPDGALQNWILHTPDGRVRLRHILSEYDDIYDVVLIDTQGAVGPLQDAAVLSADMLLSPIPPEILSAR EFARGTLGMIDRLKPMAALGAPIAPLRGLLYRMDRTADARAIAHELRRETYEPSKGQITILETAVPATVAYREAATRQIP AHRWEPRREGPTPSALETMRALTQELFPHLDSA
Sequences:
>Translated_273_residues MAIKLCVCSTKGGVGKTTVTANLGAYLADLGQRVLLVDADVQPTLSSYFPIHDPPSPRGLTALITEGETGSTVSTTKIDG DEGGLLDLVLSDDPDGALQNWILHTPDGRVRLRHILSEYDDIYDVVLIDTQGAVGPLQDAAVLSADMLLSPIPPEILSAR EFARGTLGMIDRLKPMAALGAPIAPLRGLLYRMDRTADARAIAHELRRETYEPSKGQITILETAVPATVAYREAATRQIP AHRWEPRREGPTPSALETMRALTQELFPHLDSA >Mature_272_residues AIKLCVCSTKGGVGKTTVTANLGAYLADLGQRVLLVDADVQPTLSSYFPIHDPPSPRGLTALITEGETGSTVSTTKIDGD EGGLLDLVLSDDPDGALQNWILHTPDGRVRLRHILSEYDDIYDVVLIDTQGAVGPLQDAAVLSADMLLSPIPPEILSARE FARGTLGMIDRLKPMAALGAPIAPLRGLLYRMDRTADARAIAHELRRETYEPSKGQITILETAVPATVAYREAATRQIPA HRWEPRREGPTPSALETMRALTQELFPHLDSA
Specific function: Unknown
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the parA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 29463; Mature: 29332
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIKLCVCSTKGGVGKTTVTANLGAYLADLGQRVLLVDADVQPTLSSYFPIHDPPSPRGL CEEEEEEEECCCCCCCEEEEHHHHHHHHHCCCEEEEEECCCCCHHHHCCCCCCCCCCCCE TALITEGETGSTVSTTKIDGDEGGLLDLVLSDDPDGALQNWILHTPDGRVRLRHILSEYD EEEEECCCCCCEEEEEEECCCCCCEEEEEECCCCCHHHHCCEEECCCCHHHHHHHHHHHC DIYDVVLIDTQGAVGPLQDAAVLSADMLLSPIPPEILSAREFARGTLGMIDRLKPMAALG CCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC APIAPLRGLLYRMDRTADARAIAHELRRETYEPSKGQITILETAVPATVAYREAATRQIP CCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHCCC AHRWEPRREGPTPSALETMRALTQELFPHLDSA CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AIKLCVCSTKGGVGKTTVTANLGAYLADLGQRVLLVDADVQPTLSSYFPIHDPPSPRGL EEEEEEEECCCCCCCEEEEHHHHHHHHHCCCEEEEEECCCCCHHHHCCCCCCCCCCCCE TALITEGETGSTVSTTKIDGDEGGLLDLVLSDDPDGALQNWILHTPDGRVRLRHILSEYD EEEEECCCCCCEEEEEEECCCCCCEEEEEECCCCCHHHHCCEEECCCCHHHHHHHHHHHC DIYDVVLIDTQGAVGPLQDAAVLSADMLLSPIPPEILSAREFARGTLGMIDRLKPMAALG CCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC APIAPLRGLLYRMDRTADARAIAHELRRETYEPSKGQITILETAVPATVAYREAATRQIP CCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHCCC AHRWEPRREGPTPSALETMRALTQELFPHLDSA CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]